Click here to switch to the map view.

The map label for this gene is 218884362

Identifier: 218884362

GI number: 218884362

Start: 997679

End: 998809

Strand: Direct

Name: 218884362

Synonym: DKAM_1051

Alternate gene names: NA

Gene position: 997679-998809 (Clockwise)

Preceding gene: 218884360

Following gene: 218884363

Centisome position: 73.08

GC content: 46.07

Gene sequence:

>1131_bases
ATGTTCGACTGGTTTAAAACACTAATCATGTACAGGTCTGACGCGTTAACTGTATGGGGCGATCCTATCGTAGTTGAAAG
ACTCTCCTGGTATTATAGCGTGATGAAAAACGAGAAGCCAGCTAGATTCATGGTCGCGAAGAAGATCCCCGTGGATATAG
ATCCTTACAATAACATGCCCCTGGATGAACTATGGAACATTCACGAGAAGGCGTCCAGGGAGTTCGCATCGCTTCTCAGA
GATATAGTTGAGAGGGGCCTCGACATCAGTGAGCTGGAAACCCCTAAATACAGCTACCTTGATATAAAGACGGCTATAGC
GTATAAGCTTATTGAGGAGTGCAGACTCTGCGAAAGGAAATGCGGTGCTAAGAGGATTAAGGGGAAGCCCGGTGTCTGCC
TGGTAGATAGGGAGTGCATAGTGCACAGCTTCTTCCACCATATTGGTGAAGAAGCCCCCTTGGTACCCAGCGGGACGATA
TTCTATGGTGGATGCAACTTTAAATGTGTTTTCTGCCAGAACTGGGATATAAGCCAGGTACATGCTAGAGATGGGGAACT
GGTTTCACCAAGGGAATTAGCGTTTATACAGAGGAATCTAAGGCTTAAAGGAGCCAGGAACATAAATCACGTAGGTGGGG
AGCCAACGCCCCATCTACCATTCATACTTGAAAGCCTCAGGTACCTCGATGTAAATGTGCCCCAGTTATGGAACAGCAAC
ATGTATATGAGCGGGGAGGCTATGACGCTACTACGGGACATCATAGATATATGGCTGCCCGACCTGAAATACGGCAATAA
TGAGTGCGCTTGGAGACTCAGTAAGGTGAGAAACTACTGGGAGATTGTAACTAGGAATATAAAGGTAGCACATGACTCCA
GTGATATAATTATAAGGCACTTGGTTTTACCAGGGCACGTAGAGTGCTGTACGAGAAGAGTCTTAGAATGGATTGCATCG
AACACGCCAAGGGCATTAGTGAATATCATGGATCAATATAGGCCGGAACATATAGTAGCGAAACACCCCGGGTTATACCC
TGAGATAGCTCGAAAACCTAGCGCATCAGAATTAAAGACCGCTTATGAGATAGCCGATAGCTTGGGGATAATGTATCAAC
AGGTATCATGA

Upstream 100 bases:

>100_bases
TTGTAGACTTGAATAAATCGAATTCTATGAACGCTCCTAGAGATAAATGTGACAACAATAAAAGACCTTAATTCAGGAGT
TAATAATAGTGTGGAAATAT

Downstream 100 bases:

>100_bases
GGCGATTTCATTGAGTAAACCAGGTATTGTTTCAGAATACTATTTCAGCGATCATTATAGAGTCATAGTCGTCGAGGAGG
GCGACTCCTATATAGTATCA

Product: Pyruvate formate-lyase activating enzyme-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MFDWFKTLIMYRSDALTVWGDPIVVERLSWYYSVMKNEKPARFMVAKKIPVDIDPYNNMPLDELWNIHEKASREFASLLR
DIVERGLDISELETPKYSYLDIKTAIAYKLIEECRLCERKCGAKRIKGKPGVCLVDRECIVHSFFHHIGEEAPLVPSGTI
FYGGCNFKCVFCQNWDISQVHARDGELVSPRELAFIQRNLRLKGARNINHVGGEPTPHLPFILESLRYLDVNVPQLWNSN
MYMSGEAMTLLRDIIDIWLPDLKYGNNECAWRLSKVRNYWEIVTRNIKVAHDSSDIIIRHLVLPGHVECCTRRVLEWIAS
NTPRALVNIMDQYRPEHIVAKHPGLYPEIARKPSASELKTAYEIADSLGIMYQQVS

Sequences:

>Translated_376_residues
MFDWFKTLIMYRSDALTVWGDPIVVERLSWYYSVMKNEKPARFMVAKKIPVDIDPYNNMPLDELWNIHEKASREFASLLR
DIVERGLDISELETPKYSYLDIKTAIAYKLIEECRLCERKCGAKRIKGKPGVCLVDRECIVHSFFHHIGEEAPLVPSGTI
FYGGCNFKCVFCQNWDISQVHARDGELVSPRELAFIQRNLRLKGARNINHVGGEPTPHLPFILESLRYLDVNVPQLWNSN
MYMSGEAMTLLRDIIDIWLPDLKYGNNECAWRLSKVRNYWEIVTRNIKVAHDSSDIIIRHLVLPGHVECCTRRVLEWIAS
NTPRALVNIMDQYRPEHIVAKHPGLYPEIARKPSASELKTAYEIADSLGIMYQQVS
>Mature_376_residues
MFDWFKTLIMYRSDALTVWGDPIVVERLSWYYSVMKNEKPARFMVAKKIPVDIDPYNNMPLDELWNIHEKASREFASLLR
DIVERGLDISELETPKYSYLDIKTAIAYKLIEECRLCERKCGAKRIKGKPGVCLVDRECIVHSFFHHIGEEAPLVPSGTI
FYGGCNFKCVFCQNWDISQVHARDGELVSPRELAFIQRNLRLKGARNINHVGGEPTPHLPFILESLRYLDVNVPQLWNSN
MYMSGEAMTLLRDIIDIWLPDLKYGNNECAWRLSKVRNYWEIVTRNIKVAHDSSDIIIRHLVLPGHVECCTRRVLEWIAS
NTPRALVNIMDQYRPEHIVAKHPGLYPEIARKPSASELKTAYEIADSLGIMYQQVS

Specific function: Unknown

COG id: COG1313

COG function: function code R; Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016431
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 43511; Mature: 43511

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDWFKTLIMYRSDALTVWGDPIVVERLSWYYSVMKNEKPARFMVAKKIPVDIDPYNNMP
CHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCC
LDELWNIHEKASREFASLLRDIVERGLDISELETPKYSYLDIKTAIAYKLIEECRLCERK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
CGAKRIKGKPGVCLVDRECIVHSFFHHIGEEAPLVPSGTIFYGGCNFKCVFCQNWDISQV
CCCHHCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEECCCCCCHH
HARDGELVSPRELAFIQRNLRLKGARNINHVGGEPTPHLPFILESLRYLDVNVPQLWNSN
CCCCCCCCCHHHHHHHHHHCEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCC
MYMSGEAMTLLRDIIDIWLPDLKYGNNECAWRLSKVRNYWEIVTRNIKVAHDSSDIIIRH
EEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEE
LVLPGHVECCTRRVLEWIASNTPRALVNIMDQYRPEHIVAKHPGLYPEIARKPSASELKT
ECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHCCCCHHHHHH
AYEIADSLGIMYQQVS
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFDWFKTLIMYRSDALTVWGDPIVVERLSWYYSVMKNEKPARFMVAKKIPVDIDPYNNMP
CHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCC
LDELWNIHEKASREFASLLRDIVERGLDISELETPKYSYLDIKTAIAYKLIEECRLCERK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
CGAKRIKGKPGVCLVDRECIVHSFFHHIGEEAPLVPSGTIFYGGCNFKCVFCQNWDISQV
CCCHHCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEECCCCCCHH
HARDGELVSPRELAFIQRNLRLKGARNINHVGGEPTPHLPFILESLRYLDVNVPQLWNSN
CCCCCCCCCHHHHHHHHHHCEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCC
MYMSGEAMTLLRDIIDIWLPDLKYGNNECAWRLSKVRNYWEIVTRNIKVAHDSSDIIIRH
EEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEE
LVLPGHVECCTRRVLEWIASNTPRALVNIMDQYRPEHIVAKHPGLYPEIARKPSASELKT
ECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHCCCCHHHHHH
AYEIADSLGIMYQQVS
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]