Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884361

Identifier: 218884361

GI number: 218884361

Start: 996113

End: 997270

Strand: Reverse

Name: 218884361

Synonym: DKAM_1050

Alternate gene names: NA

Gene position: 997270-996113 (Counterclockwise)

Preceding gene: 218884365

Following gene: 218884352

Centisome position: 73.05

GC content: 45.51

Gene sequence:

>1158_bases
GTGAACTGGAGGATAATCGGGTTAATATCCATAGTGGCATTAATAGTCTCGATAGCGCCATTAGCATCCATACCCATCAT
TGCAAGCGGGGATCAGGAATCCCAGGATTCAGAGGTAGCCAGTGACATCATCGTTGGGAACAGCACGATGAATCTCACAG
TGCCAGCTATATCCATCGATGATGCCTTAAACCTAGCATACATGATGAGGAATATAACGTATGAGCTGTTCATGTGGGAG
GTAAACCATAATGTAAGCGTTGCTAACGTGACTCTTAACCTCGGTGATAAATTCCTTGATAAGGCCCTGGAGCTGAAGGA
TAATGCAAGTAGGAGGGCAATAGTCTTCGCCGTAGTGGCCGCGATACACTATGGCCATGCTCCTTCATTCGCTAATCCAG
TGCTGGCAAGGGTAATATACAGTAGCCTTGGCGAGAATAACACCGTGACAGACGAGACTGTAAACGCTGTGATAACTGCA
TCAAGCGAGTTAAAATCCATACTGTTAAACGCGGTAAGCTACGCTGAGTCAAAGAATTTCAACACTACTTTTACATACTA
CTGGGTCAGTAAGGGTGATAATCTAACCTCATTAGCACAGCAATACCTTGGAGAAGGCAATGTTACAGCAGCATTCAGGC
ACGCCATAGCCGGGTACAAGGCTTATGTTAGGGCGTACTCTACACTAGTGAAGACCGTGTTCACCCAGTATCTTAGAGAC
CTCGGGATAATCAGGGGGAAGCCATTCATCCCTCCAGGACTACTGGATAAGCTACCTCTGGAATTAAGAAGCGAGATAAA
TGCTAGAGTAGAGAAGGGTGAGATTAAGAGCATAAGGGATATAGTGGGCGAGGTTAGAAAGGAGATACAGAATAGAACTG
AGATGTGGAAGGAGAGAGAATACGTTCAGATAGCTAACATACTAGCTTCAGCACTAGAAAAGCTCAGTAAACACCCCGTA
TTAACAAGGGTAATAATGGGGAAGCAGTTGAGGGATTACTGCTATGATCTAGTGAAAGAGGTAGCATCGAAGACCAATGC
CACGGGACTACAACTACTCCAGCTGTCGCTGCAGGAGCTGCAGAACAGGGTTCAGGGAGGATTAAATATACAGCAGGAAT
TCCAGGGCTCAGTAGTAAAGATCAGGATGAAACATTAG

Upstream 100 bases:

>100_bases
AGTCCGATGGTTTCAAGCATATTGGAACAGTTTCCCCGATTGTTTCAGACGAGCCCTTATTTTTAACTATCGCTATATAC
CCTCCTTGAGGTGGTGTAAT

Downstream 100 bases:

>100_bases
TCTTCTAAGCCTACTCTACTTTTTTATTTTTTCGATAACATATTTTACAATGTAATCGGGCGGATTTACTCCTGTAGCGC
TCCTCAACCCCTCCCATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MNWRIIGLISIVALIVSIAPLASIPIIASGDQESQDSEVASDIIVGNSTMNLTVPAISIDDALNLAYMMRNITYELFMWE
VNHNVSVANVTLNLGDKFLDKALELKDNASRRAIVFAVVAAIHYGHAPSFANPVLARVIYSSLGENNTVTDETVNAVITA
SSELKSILLNAVSYAESKNFNTTFTYYWVSKGDNLTSLAQQYLGEGNVTAAFRHAIAGYKAYVRAYSTLVKTVFTQYLRD
LGIIRGKPFIPPGLLDKLPLELRSEINARVEKGEIKSIRDIVGEVRKEIQNRTEMWKEREYVQIANILASALEKLSKHPV
LTRVIMGKQLRDYCYDLVKEVASKTNATGLQLLQLSLQELQNRVQGGLNIQQEFQGSVVKIRMKH

Sequences:

>Translated_385_residues
MNWRIIGLISIVALIVSIAPLASIPIIASGDQESQDSEVASDIIVGNSTMNLTVPAISIDDALNLAYMMRNITYELFMWE
VNHNVSVANVTLNLGDKFLDKALELKDNASRRAIVFAVVAAIHYGHAPSFANPVLARVIYSSLGENNTVTDETVNAVITA
SSELKSILLNAVSYAESKNFNTTFTYYWVSKGDNLTSLAQQYLGEGNVTAAFRHAIAGYKAYVRAYSTLVKTVFTQYLRD
LGIIRGKPFIPPGLLDKLPLELRSEINARVEKGEIKSIRDIVGEVRKEIQNRTEMWKEREYVQIANILASALEKLSKHPV
LTRVIMGKQLRDYCYDLVKEVASKTNATGLQLLQLSLQELQNRVQGGLNIQQEFQGSVVKIRMKH
>Mature_385_residues
MNWRIIGLISIVALIVSIAPLASIPIIASGDQESQDSEVASDIIVGNSTMNLTVPAISIDDALNLAYMMRNITYELFMWE
VNHNVSVANVTLNLGDKFLDKALELKDNASRRAIVFAVVAAIHYGHAPSFANPVLARVIYSSLGENNTVTDETVNAVITA
SSELKSILLNAVSYAESKNFNTTFTYYWVSKGDNLTSLAQQYLGEGNVTAAFRHAIAGYKAYVRAYSTLVKTVFTQYLRD
LGIIRGKPFIPPGLLDKLPLELRSEINARVEKGEIKSIRDIVGEVRKEIQNRTEMWKEREYVQIANILASALEKLSKHPV
LTRVIMGKQLRDYCYDLVKEVASKTNATGLQLLQLSLQELQNRVQGGLNIQQEFQGSVVKIRMKH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42808; Mature: 42808

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWRIIGLISIVALIVSIAPLASIPIIASGDQESQDSEVASDIIVGNSTMNLTVPAISID
CCEEEHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHEECCCEEEEEEEEEEHH
DALNLAYMMRNITYELFMWEVNHNVSVANVTLNLGDKFLDKALELKDNASRRAIVFAVVA
HHHHHHHHHHHCEEEEEEEEECCCEEEEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHH
AIHYGHAPSFANPVLARVIYSSLGENNTVTDETVNAVITASSELKSILLNAVSYAESKNF
HHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHEECHHHHHHHHHHHHHHHHCCCC
NTTFTYYWVSKGDNLTSLAQQYLGEGNVTAAFRHAIAGYKAYVRAYSTLVKTVFTQYLRD
CCEEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGIIRGKPFIPPGLLDKLPLELRSEINARVEKGEIKSIRDIVGEVRKEIQNRTEMWKERE
CCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVQIANILASALEKLSKHPVLTRVIMGKQLRDYCYDLVKEVASKTNATGLQLLQLSLQEL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
QNRVQGGLNIQQEFQGSVVKIRMKH
HHHHHCCCCCHHHHCCCEEEEEECC
>Mature Secondary Structure
MNWRIIGLISIVALIVSIAPLASIPIIASGDQESQDSEVASDIIVGNSTMNLTVPAISID
CCEEEHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHEECCCEEEEEEEEEEHH
DALNLAYMMRNITYELFMWEVNHNVSVANVTLNLGDKFLDKALELKDNASRRAIVFAVVA
HHHHHHHHHHHCEEEEEEEEECCCEEEEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHH
AIHYGHAPSFANPVLARVIYSSLGENNTVTDETVNAVITASSELKSILLNAVSYAESKNF
HHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHEECHHHHHHHHHHHHHHHHCCCC
NTTFTYYWVSKGDNLTSLAQQYLGEGNVTAAFRHAIAGYKAYVRAYSTLVKTVFTQYLRD
CCEEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGIIRGKPFIPPGLLDKLPLELRSEINARVEKGEIKSIRDIVGEVRKEIQNRTEMWKERE
CCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVQIANILASALEKLSKHPVLTRVIMGKQLRDYCYDLVKEVASKTNATGLQLLQLSLQEL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
QNRVQGGLNIQQEFQGSVVKIRMKH
HHHHHCCCCCHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA