| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884335
Identifier: 218884335
GI number: 218884335
Start: 973582
End: 973818
Strand: Reverse
Name: 218884335
Synonym: DKAM_1024
Alternate gene names: NA
Gene position: 973818-973582 (Counterclockwise)
Preceding gene: 218884341
Following gene: 218884325
Centisome position: 71.33
GC content: 41.35
Gene sequence:
>237_bases GTGTCCCTCGTGGAGTCAGGTAAACCAAGGGAGATATACATACCGATCCATGCATTGCCAACGTGTAATAATTTAACGGA TCTATGCCCTAATATAGAGTTAATTAATTTTGAAAAGGATGGAGAGAAATATTGTGTGGCTTACTGTAAAGTACTTGAGA GATATCTAACTAGGTCTACTGTTAGGAAATGTGAGACCCTGTGGAGATCCTGTCCCTTTGCTAGGATGAGCCCCTAG
Upstream 100 bases:
>100_bases AGAGCGCCGGGCTGTGGACCCCTCGAGATGAGGAGGGTGGAAACCCGGAGGTCCCGGGTTCAAATCCCGGCCCGGGCCCT TTCCAATAGCCTTAAAATAG
Downstream 100 bases:
>100_bases GAATAAAGGATTGTAACTTCTAGGTGGATAGGGGTTTTAAGATTACGTACTCGTTTACAACGTCTATCCCGGTTATTCTC TTAACTATTTCGGGTTCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MSLVESGKPREIYIPIHALPTCNNLTDLCPNIELINFEKDGEKYCVAYCKVLERYLTRSTVRKCETLWRSCPFARMSP
Sequences:
>Translated_78_residues MSLVESGKPREIYIPIHALPTCNNLTDLCPNIELINFEKDGEKYCVAYCKVLERYLTRSTVRKCETLWRSCPFARMSP >Mature_77_residues SLVESGKPREIYIPIHALPTCNNLTDLCPNIELINFEKDGEKYCVAYCKVLERYLTRSTVRKCETLWRSCPFARMSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9057; Mature: 8925
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 7.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVESGKPREIYIPIHALPTCNNLTDLCPNIELINFEKDGEKYCVAYCKVLERYLTRST CCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH VRKCETLWRSCPFARMSP HHHHHHHHHHCCCCCCCC >Mature Secondary Structure SLVESGKPREIYIPIHALPTCNNLTDLCPNIELINFEKDGEKYCVAYCKVLERYLTRST CCCCCCCCCEEEEEEECCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH VRKCETLWRSCPFARMSP HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA