| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884341
Identifier: 218884341
GI number: 218884341
Start: 978579
End: 978929
Strand: Reverse
Name: 218884341
Synonym: DKAM_1030
Alternate gene names: NA
Gene position: 978929-978579 (Counterclockwise)
Preceding gene: 218884342
Following gene: 218884335
Centisome position: 71.7
GC content: 43.59
Gene sequence:
>351_bases ATGTATGAACTACGTTCAAGAGAAGAGCTTACCCGTGCCATAATCGGGAATGAAGTCGTATTCATAGAGTATTACATTCC AAACAATAGGGACTCAGAAAACCTGACGGCAGCTGTAAAAAGCCTTGAGGAAGATGGTGATTCAAGGATACTCTTTTGCA GAATAAACATGACCGAGTATCCGGAGCTCGTGGAGACACCTAGGGGGATTCCCTACGTGGAGGTCTATTACATGGGTAAA AGAGTCTTTGAACACTATGGGAGTCTAAGCACGGCGGACTTGAATCTACAGGTTCTGAGAAGAGGATTGAGGCAAGTGTT TAGAGAATTAAACATTAGCCTACGTATCTAG
Upstream 100 bases:
>100_bases TAATTATACCAGAGGAACAGAGCATCAAACAATATAAACCAACATCAACAACTATAAAACATATAAAAACAAAAACAATT CATGAGGGCAGTAAGCCAGG
Downstream 100 bases:
>100_bases CCGGGTATTCAACCTATATTCTTACATCCCTGCTGTTTATTTCCTCAATAATTGAGTTGATCTCGGCACGGGTTAACCTA ATAGGGTAGAGAACCCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MYELRSREELTRAIIGNEVVFIEYYIPNNRDSENLTAAVKSLEEDGDSRILFCRINMTEYPELVETPRGIPYVEVYYMGK RVFEHYGSLSTADLNLQVLRRGLRQVFRELNISLRI
Sequences:
>Translated_116_residues MYELRSREELTRAIIGNEVVFIEYYIPNNRDSENLTAAVKSLEEDGDSRILFCRINMTEYPELVETPRGIPYVEVYYMGK RVFEHYGSLSTADLNLQVLRRGLRQVFRELNISLRI >Mature_116_residues MYELRSREELTRAIIGNEVVFIEYYIPNNRDSENLTAAVKSLEEDGDSRILFCRINMTEYPELVETPRGIPYVEVYYMGK RVFEHYGSLSTADLNLQVLRRGLRQVFRELNISLRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13668; Mature: 13668
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYELRSREELTRAIIGNEVVFIEYYIPNNRDSENLTAAVKSLEEDGDSRILFCRINMTEY CCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCC PELVETPRGIPYVEVYYMGKRVFEHYGSLSTADLNLQVLRRGLRQVFRELNISLRI HHHHCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCEECC >Mature Secondary Structure MYELRSREELTRAIIGNEVVFIEYYIPNNRDSENLTAAVKSLEEDGDSRILFCRINMTEY CCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCC PELVETPRGIPYVEVYYMGKRVFEHYGSLSTADLNLQVLRRGLRQVFRELNISLRI HHHHCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA