| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884320
Identifier: 218884320
GI number: 218884320
Start: 954240
End: 954881
Strand: Reverse
Name: 218884320
Synonym: DKAM_1009
Alternate gene names: NA
Gene position: 954881-954240 (Counterclockwise)
Preceding gene: 218884322
Following gene: 218884317
Centisome position: 69.94
GC content: 42.21
Gene sequence:
>642_bases GTGGATTTAATAAGACTACTTACAAGGGGGTTTAAAGCCGTTGTAAGCCATTATATGGGTATTAAGTCAAGGATAGTACT CGAGGTATTGAATAATAAACCAGTAGACCCGATCATCATACTTGATCAAAACAGTATACTGAGTAGAACCATAGGGTTAG AGGGATCATCTATACCTGGCATCCATATAAACCAATTGGTTGAGGCTAGGAAAGGGCTACTCATAGTCTTCGAGCCAGGG GAGGAAATAGAGTTCTATCCCCTAGTAAAAAACTATGGGAACATACTAGTGTTTACAACCCCTGGCTCCAAGGCCAGGAT ACCCAGGTTCTTCGCCAAGATATATGTCGATAAGATAGATGAGGACACTTACCTTATGAGAATGTGGAAGGGCAGGGTGG TAAGGATATATGTAGACATGGATAGGCTGCGTATAGCTAGTAAACCAGAGGGGGTTTACGGCCAGGTATACGATTTATTG AGGAAGCTGATGATAGAGTATGGTGAGATAACTATTAAAGACGCCATAAGGGCCGTATCGCTTGAGTTAGGTGTAGAAAA GGAAGTGGCTAGGCAAATAATCTACAAGCTCCTCAAGGAGAGGTATTTCAGGGTGGTACATGGTAAAATAACCTTGTACT AG
Upstream 100 bases:
>100_bases AAGCATCCTGTAAAACCTTCAAACTGGGAACAGATATACAACCTAGTTATTCTTCTTTTAAATGGGTTGAGATATAAAAT AACTATAGCGTGATGGTAGA
Downstream 100 bases:
>100_bases TTTAATCGGTAGGAGTCCTCAACTCCATGTGGAGAGGAGGGACTCGTCGAAATATATCTTATAAATCCCAATCTTCTTGA AGATCACGTTGATGTAGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MDLIRLLTRGFKAVVSHYMGIKSRIVLEVLNNKPVDPIIILDQNSILSRTIGLEGSSIPGIHINQLVEARKGLLIVFEPG EEIEFYPLVKNYGNILVFTTPGSKARIPRFFAKIYVDKIDEDTYLMRMWKGRVVRIYVDMDRLRIASKPEGVYGQVYDLL RKLMIEYGEITIKDAIRAVSLELGVEKEVARQIIYKLLKERYFRVVHGKITLY
Sequences:
>Translated_213_residues MDLIRLLTRGFKAVVSHYMGIKSRIVLEVLNNKPVDPIIILDQNSILSRTIGLEGSSIPGIHINQLVEARKGLLIVFEPG EEIEFYPLVKNYGNILVFTTPGSKARIPRFFAKIYVDKIDEDTYLMRMWKGRVVRIYVDMDRLRIASKPEGVYGQVYDLL RKLMIEYGEITIKDAIRAVSLELGVEKEVARQIIYKLLKERYFRVVHGKITLY >Mature_213_residues MDLIRLLTRGFKAVVSHYMGIKSRIVLEVLNNKPVDPIIILDQNSILSRTIGLEGSSIPGIHINQLVEARKGLLIVFEPG EEIEFYPLVKNYGNILVFTTPGSKARIPRFFAKIYVDKIDEDTYLMRMWKGRVVRIYVDMDRLRIASKPEGVYGQVYDLL RKLMIEYGEITIKDAIRAVSLELGVEKEVARQIIYKLLKERYFRVVHGKITLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24603; Mature: 24603
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLIRLLTRGFKAVVSHYMGIKSRIVLEVLNNKPVDPIIILDQNSILSRTIGLEGSSIPG CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCEEEEECCCCHHHHEECCCCCCCCC IHINQLVEARKGLLIVFEPGEEIEFYPLVKNYGNILVFTTPGSKARIPRFFAKIYVDKID CHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCC EDTYLMRMWKGRVVRIYVDMDRLRIASKPEGVYGQVYDLLRKLMIEYGEITIKDAIRAVS CCHHHHHHHCCCEEEEEEEHHHHEECCCCCCCHHHHHHHHHHHHHHHCCEEHHHHHHHHH LELGVEKEVARQIIYKLLKERYFRVVHGKITLY HHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEC >Mature Secondary Structure MDLIRLLTRGFKAVVSHYMGIKSRIVLEVLNNKPVDPIIILDQNSILSRTIGLEGSSIPG CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCEEEEECCCCHHHHEECCCCCCCCC IHINQLVEARKGLLIVFEPGEEIEFYPLVKNYGNILVFTTPGSKARIPRFFAKIYVDKID CHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCC EDTYLMRMWKGRVVRIYVDMDRLRIASKPEGVYGQVYDLLRKLMIEYGEITIKDAIRAVS CCHHHHHHHCCCEEEEEEEHHHHEECCCCCCCHHHHHHHHHHHHHHHCCEEHHHHHHHHH LELGVEKEVARQIIYKLLKERYFRVVHGKITLY HHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA