| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884317
Identifier: 218884317
GI number: 218884317
Start: 952607
End: 953398
Strand: Reverse
Name: 218884317
Synonym: DKAM_1006
Alternate gene names: NA
Gene position: 953398-952607 (Counterclockwise)
Preceding gene: 218884320
Following gene: 218884315
Centisome position: 69.83
GC content: 46.46
Gene sequence:
>792_bases ATGAGTGGGGAGGTGGCCAAAGAGTTAAACACTGGTATCGTGATAGCCGGTGCATATGCTGATAAACTACGTAGAACCCT CTATGCTCAGTTAGCAGGTATCGTGAAAACAAACAAGGAGTTTGCGAGGGAGATTGCGAGAGCATCCGCGGAGCTAAACA TGTTGCTCTTCCACGTATTGGTTGAAGGGGTAAAAGTAGATAAGGGAGATGCTGTTAGAATCAGGGTGAAGTACATTATC GATGAGAAAGCCATGAGAATAAAATGGCTATATGATACACTTAAACTAGAAGTATTCAAGAGAGTACCGGATGAACAGGT CGAGAGCATAAAGAACAAGGTAATTAACGAGAAACTAGCTGAGATCCAGGAGAAATATAAGGAAGCACCTACACGTGAGG AAGCAGAGAGAATCCTGGCTGGGGAGACTGAGGAAACCGTGGTGGAGAAACCAGTGAAACCAGTCGAAGACCCCCTAGAT AGGATTATGTCACTAGACCTTGTTGGTGAAACAATTGAGGGAGGCTACCTCTTCAAGATAACCGGGAGGGAGGGAGCCTC GATAGGGCTTGTATCAATGGTTGCCAGCGGTGAAGACGTAGTGTTCGACGCGGTATTACTTGGAGATGGGGAGATAGCAT ACAGGTATATCGCTAGAACTCATGGGAGGCTCAATCAATACGTTGAAGCCCCCGATAAGATACTCGAGGAGCTGAGGAAG ACCAAGCCTACCCAACTAGGTAGGGATGAGGCTTCAAGGCTAATAGAGGAGAAAATGAAGTCACTGTTGTGA
Upstream 100 bases:
>100_bases CATTATATTAAAAGTAGTTTCTCACAGGGTAATAAATCAGTTCAAGGCATTAATTAAGTTAATTAAGCTGAGATAATATA TTATTTCTTAGGGATCACTT
Downstream 100 bases:
>100_bases AAAGCCTTTAATGGCTTCATCGAGCCTGACGAGAAACTCGTTGAAAAACTCTTTTTTAACCCTGGCTCCTGCAGCGAACG GGTGTCCACCACCCATAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MSGEVAKELNTGIVIAGAYADKLRRTLYAQLAGIVKTNKEFAREIARASAELNMLLFHVLVEGVKVDKGDAVRIRVKYII DEKAMRIKWLYDTLKLEVFKRVPDEQVESIKNKVINEKLAEIQEKYKEAPTREEAERILAGETEETVVEKPVKPVEDPLD RIMSLDLVGETIEGGYLFKITGREGASIGLVSMVASGEDVVFDAVLLGDGEIAYRYIARTHGRLNQYVEAPDKILEELRK TKPTQLGRDEASRLIEEKMKSLL
Sequences:
>Translated_263_residues MSGEVAKELNTGIVIAGAYADKLRRTLYAQLAGIVKTNKEFAREIARASAELNMLLFHVLVEGVKVDKGDAVRIRVKYII DEKAMRIKWLYDTLKLEVFKRVPDEQVESIKNKVINEKLAEIQEKYKEAPTREEAERILAGETEETVVEKPVKPVEDPLD RIMSLDLVGETIEGGYLFKITGREGASIGLVSMVASGEDVVFDAVLLGDGEIAYRYIARTHGRLNQYVEAPDKILEELRK TKPTQLGRDEASRLIEEKMKSLL >Mature_262_residues SGEVAKELNTGIVIAGAYADKLRRTLYAQLAGIVKTNKEFAREIARASAELNMLLFHVLVEGVKVDKGDAVRIRVKYIID EKAMRIKWLYDTLKLEVFKRVPDEQVESIKNKVINEKLAEIQEKYKEAPTREEAERILAGETEETVVEKPVKPVEDPLDR IMSLDLVGETIEGGYLFKITGREGASIGLVSMVASGEDVVFDAVLLGDGEIAYRYIARTHGRLNQYVEAPDKILEELRKT KPTQLGRDEASRLIEEKMKSLL
Specific function: Unknown
COG id: COG4345
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29592; Mature: 29460
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGEVAKELNTGIVIAGAYADKLRRTLYAQLAGIVKTNKEFAREIARASAELNMLLFHVL CCCHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VEGVKVDKGDAVRIRVKYIIDEKAMRIKWLYDTLKLEVFKRVPDEQVESIKNKVINEKLA HHCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH EIQEKYKEAPTREEAERILAGETEETVVEKPVKPVEDPLDRIMSLDLVGETIEGGYLFKI HHHHHHHCCCCHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEE TGREGASIGLVSMVASGEDVVFDAVLLGDGEIAYRYIARTHGRLNQYVEAPDKILEELRK ECCCCCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH TKPTQLGRDEASRLIEEKMKSLL CCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SGEVAKELNTGIVIAGAYADKLRRTLYAQLAGIVKTNKEFAREIARASAELNMLLFHVL CCHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VEGVKVDKGDAVRIRVKYIIDEKAMRIKWLYDTLKLEVFKRVPDEQVESIKNKVINEKLA HHCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH EIQEKYKEAPTREEAERILAGETEETVVEKPVKPVEDPLDRIMSLDLVGETIEGGYLFKI HHHHHHHCCCCHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEE TGREGASIGLVSMVASGEDVVFDAVLLGDGEIAYRYIARTHGRLNQYVEAPDKILEELRK ECCCCCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH TKPTQLGRDEASRLIEEKMKSLL CCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA