| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884313
Identifier: 218884313
GI number: 218884313
Start: 948372
End: 949886
Strand: Reverse
Name: 218884313
Synonym: DKAM_1002
Alternate gene names: NA
Gene position: 949886-948372 (Counterclockwise)
Preceding gene: 218884315
Following gene: 218884312
Centisome position: 69.58
GC content: 45.08
Gene sequence:
>1515_bases GTGGTCGGGGTAATCAAGCCGGGCTCAGCCTCTGAGAAAAAGTTTCTTGAAACCCTCGGGGAGACGCTGGATGAGTACTT TGACTGGGTAACAATCTACGAGACACCAGTGCTGAGATGGGACTGGAGTAAGTGTGTTATCGAGATAAATGGTGAGGAAT ATAAGTGTAGACCACTACCGTACACGCTCACAGGGGTTGGTGAGGGTAGGGGTCTAACAGCTAAAGGAGTGAGCAGGGAA CTGGGGGGCAAGGTGCTCCTCCATGAATATCCCTCTAATATCCATGAGCTCAGATTCATTGTAGGCGAGGCATTGAAGAA CGGTGCAGAGGCTATAGTGTTCATGCATGAAGGAGGGAGACCATGGGATGCCGCAGTATTATCTAGTAGTATACCGGTCT TAAAGCCGGATACCCCGCCAGGGATCCCTGTCGTAGTCCTCGAGTCTAATCCTAGGAGGATGAGTGGTTTCAATGGGGAA AGAATACGTGTTGAGACAGAGGCGAGGATACATGATGGGGTTGGGAGGACGATGTTAGCAGGGATGAGTAATGGTGATAA AGTTAAAGTACACGTGTCCACACATCATGATGGGATCCCAGATGATAGTGGATATATAGGTAAATACATTGGATTACTTA GAGACATCTTAACTATCGCAACCAGGCATAGTAATGTAGAAGTTGTTTTTGTATCGTACACGGCGAAGGAGATAGGCGAT CCCCAGTTGAATAGTTATACATGGTCCTGGGGCTCTAGATACCTCTTAGAGATCCTTGAATCAAAGGACCTGCTGGATAA CACCCTCCTAGATATAAACCTGGATTTTAAAGGAGATGTTTTCGAGATAATAGATAACCCGATACCGCTTCTCCCCAACC CAGACACCGTGAACAAAGGTAAAACACACTTCGGCTTCGATAGCCTAGCATACCTGAATCATGGGATTCCCTCGGTAACA ATCTCAGGGTTAAGCCCGGGTAATGTGGAAAGAGATATATATAAAGATATAGGGTACGTTATCGAAGCCCTCCTTAAAAT AGTAGAGGACCCCCAATCAATGCTTAAAAGGCTATGGAGTGAACTGGTTAAAAAGCATGATGCAGCCCCCTTAGAGTACA GGAATTCGGTGACAAGGATTTATGAATCCAGTAGGTTCACCGGGGTTTCCAACGCTGTCAAGGCTCTAATTACCTATACA TCTGCTTTAGCCTCACTATATGTAATTACAGGCGGCGAATTTCACTCATGTATAACCCATGCGCCTCTATATTCGCTTCT CGGGGAGTATATGAATAGAGTTGAGTATAGGCTTGGGGAAAGGGGGAGGATAATTGTATGGAGCCTCGATAACATAATAC TGGATGCAGGGGTAAGACTAGAGCCAAGCCTGATAAACAGTATCCTTAAAAGAATAGAGTCCTTCATGCTTATTAAGATT GATGAATTGTTAAATAACATACTAGAACTACAGGTATGTAGGAGAAGTATACAGGGTGCAAGCGATGAGCATTAG
Upstream 100 bases:
>100_bases AATATATTGGTTGTCATGTATACTCCCCTTGAAACAGTATTCTTCAATGTAAAATACTATATCCCTTATTAAAGATGAAA CCTATAAGAGAGGGTTGAAA
Downstream 100 bases:
>100_bases GAAAAGCATTGGGATAGATAAATATGAAAACTTCCCCGAGTGGTATCAGGCAGTATTAAAGGAAGCCGGCGTCATCGATA TAAGATACCCTGTTAAAGGC
Product: aminopeptidase Iap family-like protein
Products: NA
Alternate protein names: Aminopeptidase; Aminopeptidase Iap Family-Like Protein; Aminopeptidase Iap Family
Number of amino acids: Translated: 504; Mature: 504
Protein sequence:
>504_residues MVGVIKPGSASEKKFLETLGETLDEYFDWVTIYETPVLRWDWSKCVIEINGEEYKCRPLPYTLTGVGEGRGLTAKGVSRE LGGKVLLHEYPSNIHELRFIVGEALKNGAEAIVFMHEGGRPWDAAVLSSSIPVLKPDTPPGIPVVVLESNPRRMSGFNGE RIRVETEARIHDGVGRTMLAGMSNGDKVKVHVSTHHDGIPDDSGYIGKYIGLLRDILTIATRHSNVEVVFVSYTAKEIGD PQLNSYTWSWGSRYLLEILESKDLLDNTLLDINLDFKGDVFEIIDNPIPLLPNPDTVNKGKTHFGFDSLAYLNHGIPSVT ISGLSPGNVERDIYKDIGYVIEALLKIVEDPQSMLKRLWSELVKKHDAAPLEYRNSVTRIYESSRFTGVSNAVKALITYT SALASLYVITGGEFHSCITHAPLYSLLGEYMNRVEYRLGERGRIIVWSLDNIILDAGVRLEPSLINSILKRIESFMLIKI DELLNNILELQVCRRSIQGASDEH
Sequences:
>Translated_504_residues MVGVIKPGSASEKKFLETLGETLDEYFDWVTIYETPVLRWDWSKCVIEINGEEYKCRPLPYTLTGVGEGRGLTAKGVSRE LGGKVLLHEYPSNIHELRFIVGEALKNGAEAIVFMHEGGRPWDAAVLSSSIPVLKPDTPPGIPVVVLESNPRRMSGFNGE RIRVETEARIHDGVGRTMLAGMSNGDKVKVHVSTHHDGIPDDSGYIGKYIGLLRDILTIATRHSNVEVVFVSYTAKEIGD PQLNSYTWSWGSRYLLEILESKDLLDNTLLDINLDFKGDVFEIIDNPIPLLPNPDTVNKGKTHFGFDSLAYLNHGIPSVT ISGLSPGNVERDIYKDIGYVIEALLKIVEDPQSMLKRLWSELVKKHDAAPLEYRNSVTRIYESSRFTGVSNAVKALITYT SALASLYVITGGEFHSCITHAPLYSLLGEYMNRVEYRLGERGRIIVWSLDNIILDAGVRLEPSLINSILKRIESFMLIKI DELLNNILELQVCRRSIQGASDEH >Mature_504_residues MVGVIKPGSASEKKFLETLGETLDEYFDWVTIYETPVLRWDWSKCVIEINGEEYKCRPLPYTLTGVGEGRGLTAKGVSRE LGGKVLLHEYPSNIHELRFIVGEALKNGAEAIVFMHEGGRPWDAAVLSSSIPVLKPDTPPGIPVVVLESNPRRMSGFNGE RIRVETEARIHDGVGRTMLAGMSNGDKVKVHVSTHHDGIPDDSGYIGKYIGLLRDILTIATRHSNVEVVFVSYTAKEIGD PQLNSYTWSWGSRYLLEILESKDLLDNTLLDINLDFKGDVFEIIDNPIPLLPNPDTVNKGKTHFGFDSLAYLNHGIPSVT ISGLSPGNVERDIYKDIGYVIEALLKIVEDPQSMLKRLWSELVKKHDAAPLEYRNSVTRIYESSRFTGVSNAVKALITYT SALASLYVITGGEFHSCITHAPLYSLLGEYMNRVEYRLGERGRIIVWSLDNIILDAGVRLEPSLINSILKRIESFMLIKI DELLNNILELQVCRRSIQGASDEH
Specific function: Unknown
COG id: COG4882
COG function: function code R; Predicted aminopeptidase, Iap family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56266; Mature: 56266
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGVIKPGSASEKKFLETLGETLDEYFDWVTIYETPVLRWDWSKCVIEINGEEYKCRPLP CCEECCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCEEEEECCEEEEEECCCEEEECCCC YTLTGVGEGRGLTAKGVSRELGGKVLLHEYPSNIHELRFIVGEALKNGAEAIVFMHEGGR EEEEECCCCCCCCCCCCHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCC PWDAAVLSSSIPVLKPDTPPGIPVVVLESNPRRMSGFNGERIRVETEARIHDGVGRTMLA CHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEHHHHHCCCCHHHHH GMSNGDKVKVHVSTHHDGIPDDSGYIGKYIGLLRDILTIATRHSNVEVVFVSYTAKEIGD CCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHCCC PQLNSYTWSWGSRYLLEILESKDLLDNTLLDINLDFKGDVFEIIDNPIPLLPNPDTVNKG CCCCCEEECHHHHHHHHHHHHCHHHCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCC KTHFGFDSLAYLNHGIPSVTISGLSPGNVERDIYKDIGYVIEALLKIVEDPQSMLKRLWS CCCCCCHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH ELVKKHDAAPLEYRNSVTRIYESSRFTGVSNAVKALITYTSALASLYVITGGEFHSCITH HHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHH APLYSLLGEYMNRVEYRLGERGRIIVWSLDNIILDAGVRLEPSLINSILKRIESFMLIKI HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEECHHHHHHHHHHHHHHHHHHH DELLNNILELQVCRRSIQGASDEH HHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVGVIKPGSASEKKFLETLGETLDEYFDWVTIYETPVLRWDWSKCVIEINGEEYKCRPLP CCEECCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCEEEEECCEEEEEECCCEEEECCCC YTLTGVGEGRGLTAKGVSRELGGKVLLHEYPSNIHELRFIVGEALKNGAEAIVFMHEGGR EEEEECCCCCCCCCCCCHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCC PWDAAVLSSSIPVLKPDTPPGIPVVVLESNPRRMSGFNGERIRVETEARIHDGVGRTMLA CHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEHHHHHCCCCHHHHH GMSNGDKVKVHVSTHHDGIPDDSGYIGKYIGLLRDILTIATRHSNVEVVFVSYTAKEIGD CCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHCCC PQLNSYTWSWGSRYLLEILESKDLLDNTLLDINLDFKGDVFEIIDNPIPLLPNPDTVNKG CCCCCEEECHHHHHHHHHHHHCHHHCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCC KTHFGFDSLAYLNHGIPSVTISGLSPGNVERDIYKDIGYVIEALLKIVEDPQSMLKRLWS CCCCCCHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH ELVKKHDAAPLEYRNSVTRIYESSRFTGVSNAVKALITYTSALASLYVITGGEFHSCITH HHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHH APLYSLLGEYMNRVEYRLGERGRIIVWSLDNIILDAGVRLEPSLINSILKRIESFMLIKI HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEECHHHHHHHHHHHHHHHHHHH DELLNNILELQVCRRSIQGASDEH HHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA