| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is cysH [C]
Identifier: 218884285
GI number: 218884285
Start: 919828
End: 921132
Strand: Reverse
Name: cysH [C]
Synonym: DKAM_0974
Alternate gene names: 218884285
Gene position: 921132-919828 (Counterclockwise)
Preceding gene: 218884288
Following gene: 218884277
Centisome position: 67.47
GC content: 45.21
Gene sequence:
>1305_bases GTGGTATTCATGGGTAACGACGTCATCATTGATGAGGGATGGGTGTGCTGGGATAGCAAGAGGAATGCTCCCAGATTAAA CTGTAGGAAATGGAGGATGAGGCATGATTACTGGCTGGCGGGTTTATTCGAGAAGAGGCTTGTAGAGGAATTAATCTCAG CCGAGTTCAAGATCCATTACCGTCTTCAAGATAGAAACGTACTCATCCACCGTGCACCTAATCCCTCGTCACGGAGCATG TTAGCACTAGAGGTATTCGCTGATGGTGTGAGACTGGGTGTAGTGGAGTATAGGATGGGGGAAAGATGGATGATCCATCC TAGCGGTGGGTTAGCTAGTCTACTCAACAGTCTAGGTGCATACAGTGTTGAGGTGGAGCCCGGCCATGGGAGAAAGCTGA AAGGCAAAAAAGTGAAGGTAGTTGGGGATATAGATGGTCTGCGATGGATTCTATTAGACTTAGACAAGTATATTGGTGTT GCAAGGGTTATTGATGCATCGAAGAAGATTGTCAAAGTAAAGGATGTAGCACCGAAAGGGTTCAAGCCCCTCCCAGCTAC AGGTATTATACAGGTTGTAGAAGCTAATAGAAGCCTGCTTGAGACAGCTGTCAACGAAGCTGTGGGCTTCCTGAAGAAAA CACTAGAGAATGTTATGGATGGTATAGCGGTCTCCTATAGTGGTGGGGCTGATTCAACAGCTTCACTAGTTTTATCTCAA GAGGCATTAGGCCATGCAAGGATAAAGGTGGTCTATGTAGATACAGGCATGGATCTACCCGGTGTCAAAGAATATGCTCT AAGAATACTTGATAAACTCGGCTTAATACCCTATGTAGTGTCTTCGGGATTGGATCCACTCAATGAGATTGCTTCTCGTG GACTACCCACGCGCGATAACAGGTGGTGTACGAGAATACTGAAACTTGAACCCTTAAGGAGATTCTACAGGGAACACAAT ATAAGATTCGTTATCGACGGATCTAGAAGCAGGGAAAGCAGTAGTCGAGCCGAGACGCCGAGGATAGGTAGAAATCCCTT AATACCTGAAGTCACAAGGATATTACCGATCAAGTGGTGGAGTAGGTTACTGGTTCAATTATACATAGTGAACAGGGGAA TAGAGTTAAACCCCTTGTACAATGAAGGCTTCACCAGGCTAGGCTGTATACTGTGTCCTGCAATGCATCCGCACGAACTT GAATTATCCTACACCAAAAATAGATACTGGTTTGAGAGATTACGGGAGGTCACGGGTCTCTCGATAAACGACGTAATGAT GTATCTTTACAGTGAGAAACAATAA
Upstream 100 bases:
>100_bases TATGATCTGGGCGAAATCTATGATTGCTGTGGGGATCCCCCCAGCTTTAAATACTGTGTAGAGATCGCTACTATACCCTG ATAGTGGAAGCTGCGTAGAA
Downstream 100 bases:
>100_bases TTGATTATGGGCCCGGCGGGATTTGAACCCGCGTCCTCCCGGTTATCAGCCGGGCGCTCCACCAAGCTGAGCTACGGGCC CCCAGGTATCCACAACATGT
Product: phosphoadenosine phosphosulfate reductase
Products: H+; Adenosine 3',5'-bisphosphate; Sulfite; Oxidized thioredoxin [C]
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MVFMGNDVIIDEGWVCWDSKRNAPRLNCRKWRMRHDYWLAGLFEKRLVEELISAEFKIHYRLQDRNVLIHRAPNPSSRSM LALEVFADGVRLGVVEYRMGERWMIHPSGGLASLLNSLGAYSVEVEPGHGRKLKGKKVKVVGDIDGLRWILLDLDKYIGV ARVIDASKKIVKVKDVAPKGFKPLPATGIIQVVEANRSLLETAVNEAVGFLKKTLENVMDGIAVSYSGGADSTASLVLSQ EALGHARIKVVYVDTGMDLPGVKEYALRILDKLGLIPYVVSSGLDPLNEIASRGLPTRDNRWCTRILKLEPLRRFYREHN IRFVIDGSRSRESSSRAETPRIGRNPLIPEVTRILPIKWWSRLLVQLYIVNRGIELNPLYNEGFTRLGCILCPAMHPHEL ELSYTKNRYWFERLREVTGLSINDVMMYLYSEKQ
Sequences:
>Translated_434_residues MVFMGNDVIIDEGWVCWDSKRNAPRLNCRKWRMRHDYWLAGLFEKRLVEELISAEFKIHYRLQDRNVLIHRAPNPSSRSM LALEVFADGVRLGVVEYRMGERWMIHPSGGLASLLNSLGAYSVEVEPGHGRKLKGKKVKVVGDIDGLRWILLDLDKYIGV ARVIDASKKIVKVKDVAPKGFKPLPATGIIQVVEANRSLLETAVNEAVGFLKKTLENVMDGIAVSYSGGADSTASLVLSQ EALGHARIKVVYVDTGMDLPGVKEYALRILDKLGLIPYVVSSGLDPLNEIASRGLPTRDNRWCTRILKLEPLRRFYREHN IRFVIDGSRSRESSSRAETPRIGRNPLIPEVTRILPIKWWSRLLVQLYIVNRGIELNPLYNEGFTRLGCILCPAMHPHEL ELSYTKNRYWFERLREVTGLSINDVMMYLYSEKQ >Mature_434_residues MVFMGNDVIIDEGWVCWDSKRNAPRLNCRKWRMRHDYWLAGLFEKRLVEELISAEFKIHYRLQDRNVLIHRAPNPSSRSM LALEVFADGVRLGVVEYRMGERWMIHPSGGLASLLNSLGAYSVEVEPGHGRKLKGKKVKVVGDIDGLRWILLDLDKYIGV ARVIDASKKIVKVKDVAPKGFKPLPATGIIQVVEANRSLLETAVNEAVGFLKKTLENVMDGIAVSYSGGADSTASLVLSQ EALGHARIKVVYVDTGMDLPGVKEYALRILDKLGLIPYVVSSGLDPLNEIASRGLPTRDNRWCTRILKLEPLRRFYREHN IRFVIDGSRSRESSSRAETPRIGRNPLIPEVTRILPIKWWSRLLVQLYIVNRGIELNPLYNEGFTRLGCILCPAMHPHEL ELSYTKNRYWFERLREVTGLSINDVMMYLYSEKQ
Specific function: Reduction Of Activated Sulfate Into Sulfite. [C]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002500 - InterPro: IPR002478 - InterPro: IPR015947 - InterPro: IPR014729 - InterPro: IPR004521 [H]
Pfam domain/function: PF01507 PAPS_reduct; PF01472 PUA [H]
EC number: 1.8.4.8 [C]
Molecular weight: Translated: 49423; Mature: 49423
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFMGNDVIIDEGWVCWDSKRNAPRLNCRKWRMRHDYWLAGLFEKRLVEELISAEFKIHY CEEECCEEEEECCEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEE RLQDRNVLIHRAPNPSSRSMLALEVFADGVRLGVVEYRMGERWMIHPSGGLASLLNSLGA EEECCCEEEEECCCCCCCCEEEEEEHHCCEEEEEEEEECCCEEEEECCCCHHHHHHHCCC YSVEVEPGHGRKLKGKKVKVVGDIDGLRWILLDLDKYIGVARVIDASKKIVKVKDVAPKG EEEEECCCCCCCCCCCEEEEEECCCCCEEHEEEHHHHHHHHHHHHCCCCEEEEECCCCCC FKPLPATGIIQVVEANRSLLETAVNEAVGFLKKTLENVMDGIAVSYSGGADSTASLVLSQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHEEEH EALGHARIKVVYVDTGMDLPGVKEYALRILDKLGLIPYVVSSGLDPLNEIASRGLPTRDN HHCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHCCCCCCCC RWCTRILKLEPLRRFYREHNIRFVIDGSRSRESSSRAETPRIGRNPLIPEVTRILPIKWW HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH SRLLVQLYIVNRGIELNPLYNEGFTRLGCILCPAMHPHELELSYTKNRYWFERLREVTGL HHHHHHHHHHHCCCEECCCHHCCHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHCC SINDVMMYLYSEKQ CHHHHHEEEECCCC >Mature Secondary Structure MVFMGNDVIIDEGWVCWDSKRNAPRLNCRKWRMRHDYWLAGLFEKRLVEELISAEFKIHY CEEECCEEEEECCEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEE RLQDRNVLIHRAPNPSSRSMLALEVFADGVRLGVVEYRMGERWMIHPSGGLASLLNSLGA EEECCCEEEEECCCCCCCCEEEEEEHHCCEEEEEEEEECCCEEEEECCCCHHHHHHHCCC YSVEVEPGHGRKLKGKKVKVVGDIDGLRWILLDLDKYIGVARVIDASKKIVKVKDVAPKG EEEEECCCCCCCCCCCEEEEEECCCCCEEHEEEHHHHHHHHHHHHCCCCEEEEECCCCCC FKPLPATGIIQVVEANRSLLETAVNEAVGFLKKTLENVMDGIAVSYSGGADSTASLVLSQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHEEEH EALGHARIKVVYVDTGMDLPGVKEYALRILDKLGLIPYVVSSGLDPLNEIASRGLPTRDN HHCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHCCCCCCCC RWCTRILKLEPLRRFYREHNIRFVIDGSRSRESSSRAETPRIGRNPLIPEVTRILPIKWW HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH SRLLVQLYIVNRGIELNPLYNEGFTRLGCILCPAMHPHELELSYTKNRYWFERLREVTGL HHHHHHHHHHHCCCEECCCHHCCHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHCC SINDVMMYLYSEKQ CHHHHHEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): 5700 [C]
Specific activity: 99
Km value (mM): 0.01 {5-phosphoadenosine} [C]
Substrates: 3'-Phosphoadenylyl sulfate; Reduced thioredoxin [C]
Specific reaction: 3'-Phosphoadenylyl sulfate + Reduced thioredoxin --> (2) H+ + Adenosine 3',5'-bisphosphate + Sulfite + Oxidized thioredoxin [C]
General reaction: Oxidation; Reduction [C]
Inhibitor: Adenosine3', 5'-bisphosphate; N-Bromosuccinimide; p-Chloromercuribenzoate [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]