Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is ypwA [H]

Identifier: 218884269

GI number: 218884269

Start: 906422

End: 907915

Strand: Direct

Name: ypwA [H]

Synonym: DKAM_0958

Alternate gene names: 218884269

Gene position: 906422-907915 (Clockwise)

Preceding gene: 218884255

Following gene: 218884278

Centisome position: 66.39

GC content: 47.39

Gene sequence:

>1494_bases
ATGTACTTCCAAAACGAGGTCGTGAAGGAGATAATTGAAAGGTATAGGCAGATATGGTCCATCGGTCATGCATTATCTCT
AATGGGCTGGGATAGCGAGACCTATATGCCTAAGGCAGGAGTGGAAGAGAGGGCCATTGCCAGAGCCGAGCTCAGCCTTC
TTGCCCAGCAGTTAATACTCAAACCCGAGTTTGTACAGCTCGTCGATAAAGCGAGTGGCTTAGAGGGGTTGAATGATTAT
GAGAAGGGTGTTGTTCGAGTACTCCAGCGTGAGATAAGGATTATGAAGGCGATACCTCCAAGACTCTTAGCTGAACTAGA
GAAGACGACTCAGGAGGCGATGCATGCCTGGAGGATGGCTAAAGAAGCAAACGACTATGAGAAGTTCAAGCCCTACCTAG
ATAAAATAATCAAGCTCACGAGAGAGAAAGCGGATTACTTGGGCTGGAAGGAGCACCCATACGATGCTCTGCTGGATTTA
TACGAGGAGGGTTTGACCACGCGAGACGTGGATGGAATTTTAGAGCCCCTGGCTAAAGAGCTGAAAGCCTTGCTGAGTAG
TGTCGTGCATGAGGGCAGATTCCCTCAGAAACACCCATTGGAAGACGAACGGTATGAGAGAGAGTGGATGGAGCGGGTCA
ATTTAGAGGTCCTGAAGATTGTGGGCTTTCCTATTGGTGAGAGGTCTAGGCTTGATGTCTCAGCACACCCCTTCACAATA
TCCATCGGCTTAGACGATGTCAGAATTACAACGAGGTATGAAGGGTTCGACTTCAAGAGGAGCCTGTTGAGCACTATACA
TGAGTTTGGCCATGCTCTCTACGAGTTGCAGATCGATCCAGGCTTGAAATACACTCCCCTAGCCGAAGGCGCGAGCTTAG
GCGTTCATGAGGGGCAGAGCCGTTTCTGGGAGAATGTAATCGGTAGGAGCCGTGAATTCGTAGAGCTCATATATCCTATA
TTAAGAAAGAATCTCCCGTCGGTAGGCAGATTCACGCCTGAGGAAGTCTACTTATACTTCAATACTGTTAGACCAAGCCT
CATACGTACAGAGGCTGATGAAGTCACATACAACCTCCACATAGTATTGAGAGCCAGGCTTGAGAAGCTGATGATCGAAG
GCTCAGTTAAAGCCGGTGACCTGCCTGAACTATGGAACAGCCTGATGGAGGAGCTGGTTGGCGTTAAACCTAAGACTTAC
AGTGAAGGAGTTCTACAGGATATTCACTGGAGTATGGGCTCGATAGGCTACTTCCCAACATACACTCTAGGAAACATTAT
AGCAGCCCAGCTTAGGTACCATATTGAGAGAAAACTGAAATTATCCGAGAAGATCTCTCGGGGAGAATTCGAGTCTATAA
GAGAATGGTTGAAAAATATGATTCACAGGTACGGTAGGACATACCCACCTAAAGAGCTTCTCAGAATGGTCTTCGGGGAG
GAATACTCGGTGGAACCACTAGTGAAATATTTGAAAGAGAAATACGTGGGGTAA

Upstream 100 bases:

>100_bases
GCAACAGGCTGGAATCCGATTATTCCTTCCTTACTCTATATTTTTGTTTAAGGATTAAGAATATAAGTTGAGGCACGTTT
AAGATAATGTGGTTATGGCT

Downstream 100 bases:

>100_bases
TCTCTTAAAGTTTAAAGTTTTTCTACGCAGAATACTCAAAGCTGGATGAAATTTAGGGATTGAATCCTGTTAAGGCTAAG
TTGAGCTAAGCTTGCCATCG

Product: peptidase M32, carboxypeptidase Taq metallopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MYFQNEVVKEIIERYRQIWSIGHALSLMGWDSETYMPKAGVEERAIARAELSLLAQQLILKPEFVQLVDKASGLEGLNDY
EKGVVRVLQREIRIMKAIPPRLLAELEKTTQEAMHAWRMAKEANDYEKFKPYLDKIIKLTREKADYLGWKEHPYDALLDL
YEEGLTTRDVDGILEPLAKELKALLSSVVHEGRFPQKHPLEDERYEREWMERVNLEVLKIVGFPIGERSRLDVSAHPFTI
SIGLDDVRITTRYEGFDFKRSLLSTIHEFGHALYELQIDPGLKYTPLAEGASLGVHEGQSRFWENVIGRSREFVELIYPI
LRKNLPSVGRFTPEEVYLYFNTVRPSLIRTEADEVTYNLHIVLRARLEKLMIEGSVKAGDLPELWNSLMEELVGVKPKTY
SEGVLQDIHWSMGSIGYFPTYTLGNIIAAQLRYHIERKLKLSEKISRGEFESIREWLKNMIHRYGRTYPPKELLRMVFGE
EYSVEPLVKYLKEKYVG

Sequences:

>Translated_497_residues
MYFQNEVVKEIIERYRQIWSIGHALSLMGWDSETYMPKAGVEERAIARAELSLLAQQLILKPEFVQLVDKASGLEGLNDY
EKGVVRVLQREIRIMKAIPPRLLAELEKTTQEAMHAWRMAKEANDYEKFKPYLDKIIKLTREKADYLGWKEHPYDALLDL
YEEGLTTRDVDGILEPLAKELKALLSSVVHEGRFPQKHPLEDERYEREWMERVNLEVLKIVGFPIGERSRLDVSAHPFTI
SIGLDDVRITTRYEGFDFKRSLLSTIHEFGHALYELQIDPGLKYTPLAEGASLGVHEGQSRFWENVIGRSREFVELIYPI
LRKNLPSVGRFTPEEVYLYFNTVRPSLIRTEADEVTYNLHIVLRARLEKLMIEGSVKAGDLPELWNSLMEELVGVKPKTY
SEGVLQDIHWSMGSIGYFPTYTLGNIIAAQLRYHIERKLKLSEKISRGEFESIREWLKNMIHRYGRTYPPKELLRMVFGE
EYSVEPLVKYLKEKYVG
>Mature_497_residues
MYFQNEVVKEIIERYRQIWSIGHALSLMGWDSETYMPKAGVEERAIARAELSLLAQQLILKPEFVQLVDKASGLEGLNDY
EKGVVRVLQREIRIMKAIPPRLLAELEKTTQEAMHAWRMAKEANDYEKFKPYLDKIIKLTREKADYLGWKEHPYDALLDL
YEEGLTTRDVDGILEPLAKELKALLSSVVHEGRFPQKHPLEDERYEREWMERVNLEVLKIVGFPIGERSRLDVSAHPFTI
SIGLDDVRITTRYEGFDFKRSLLSTIHEFGHALYELQIDPGLKYTPLAEGASLGVHEGQSRFWENVIGRSREFVELIYPI
LRKNLPSVGRFTPEEVYLYFNTVRPSLIRTEADEVTYNLHIVLRARLEKLMIEGSVKAGDLPELWNSLMEELVGVKPKTY
SEGVLQDIHWSMGSIGYFPTYTLGNIIAAQLRYHIERKLKLSEKISRGEFESIREWLKNMIHRYGRTYPPKELLRMVFGE
EYSVEPLVKYLKEKYVG

Specific function: Unknown

COG id: COG2317

COG function: function code E; Zn-dependent carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001333 [H]

Pfam domain/function: PF02074 Peptidase_M32 [H]

EC number: NA

Molecular weight: Translated: 57872; Mature: 57872

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS00639 THIOL_PROTEASE_HIS ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFQNEVVKEIIERYRQIWSIGHALSLMGWDSETYMPKAGVEERAIARAELSLLAQQLIL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
KPEFVQLVDKASGLEGLNDYEKGVVRVLQREIRIMKAIPPRLLAELEKTTQEAMHAWRMA
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
KEANDYEKFKPYLDKIIKLTREKADYLGWKEHPYDALLDLYEEGLTTRDVDGILEPLAKE
HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
LKALLSSVVHEGRFPQKHPLEDERYEREWMERVNLEVLKIVGFPIGERSRLDVSAHPFTI
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCEEE
SIGLDDVRITTRYEGFDFKRSLLSTIHEFGHALYELQIDPGLKYTPLAEGASLGVHEGQS
EECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCHHH
RFWENVIGRSREFVELIYPILRKNLPSVGRFTPEEVYLYFNTVRPSLIRTEADEVTYNLH
HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHEEEEEECCCCHHHHCCHHHHEEEHH
IVLRARLEKLMIEGSVKAGDLPELWNSLMEELVGVKPKTYSEGVLQDIHWSMGSIGYFPT
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCH
YTLGNIIAAQLRYHIERKLKLSEKISRGEFESIREWLKNMIHRYGRTYPPKELLRMVFGE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
EYSVEPLVKYLKEKYVG
CCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MYFQNEVVKEIIERYRQIWSIGHALSLMGWDSETYMPKAGVEERAIARAELSLLAQQLIL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
KPEFVQLVDKASGLEGLNDYEKGVVRVLQREIRIMKAIPPRLLAELEKTTQEAMHAWRMA
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
KEANDYEKFKPYLDKIIKLTREKADYLGWKEHPYDALLDLYEEGLTTRDVDGILEPLAKE
HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
LKALLSSVVHEGRFPQKHPLEDERYEREWMERVNLEVLKIVGFPIGERSRLDVSAHPFTI
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCEEE
SIGLDDVRITTRYEGFDFKRSLLSTIHEFGHALYELQIDPGLKYTPLAEGASLGVHEGQS
EECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCHHH
RFWENVIGRSREFVELIYPILRKNLPSVGRFTPEEVYLYFNTVRPSLIRTEADEVTYNLH
HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHEEEEEECCCCHHHHCCHHHHEEEHH
IVLRARLEKLMIEGSVKAGDLPELWNSLMEELVGVKPKTYSEGVLQDIHWSMGSIGYFPT
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCH
YTLGNIIAAQLRYHIERKLKLSEKISRGEFESIREWLKNMIHRYGRTYPPKELLRMVFGE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
EYSVEPLVKYLKEKYVG
CCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]