| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884239
Identifier: 218884239
GI number: 218884239
Start: 881552
End: 882472
Strand: Reverse
Name: 218884239
Synonym: DKAM_0928
Alternate gene names: NA
Gene position: 882472-881552 (Counterclockwise)
Preceding gene: 218884240
Following gene: 218884237
Centisome position: 64.64
GC content: 42.35
Gene sequence:
>921_bases ATGGGAGAACTAATGACGCAAACAAGTATTGAGGAAATACAAAGAGAAATAGAAGAAGCATCAAAGCAGATCAGTGAGGT AAGAGAGAAGATAAAGACGCTGAAGGAGCAGAGATACCGGTTAATAAATGAGTTGAAAACAGAAAGGGCCGAGAAGCAGA AGTATCTCGGTGAGCTGAGGTCGCTCAAGGAAAAACTAAAGAATATTAGAGAGGCGAGGAAACGCCTCCTTGAAGAGTAT AAAAGGCTAGCTGAGGAGAGGAGGAACAAGATAGAAGAGTTGAGGACGCTGAGAGAAATACTTGTTATGAAACAAAACGT CATCCAGAACATGTCGCGGGAGGCGAGGACGCCATCTAATATACTGAGAGAGGAGATCGAGAGGCTTGAATGGATGCTGC AAACTAGGGTCTTATCAATTGAAGAAGAGAACAGGGTAATACAGAAGATAAAGAGGCTTACATCGCTGCTGGAGAAAGCC GAGAAGCTGAGAAAAGAGAAAAATGAAATATTAGAGGTTAAGGCATTCTATTCGAGCCTCAGGATCCAGGTAAAAGACTT AACCAGTAAGCTCAATAATATGAGGGGGGAAATAGGTAGGCTTACAGCTGAAAGGGATAAGATCAAACAACAGTTGAATG AACTAGTGAAAAAATACCTTGACTTAAAGAACGATATACAGGTTAAGCAGGACTCGGTTAACGCTATATCCAAGGAAATC GAGGATTTAACCAATAAGCTCAACGAGTTAAGGGAGAAGGTTAGCAACCTCAACAAGGAGCTGGAGAAGGCTAAACTGGG CATGGTTTTAAACATGAAGAAGCAGGAGATCCTGGAGAAGGCAAGCGGTAAGAAGCGTTTAACAATCGACGAGCTCAAGA TAATATATGGTGAACCGGAGGATTTCATGGAGGAGCAGTAA
Upstream 100 bases:
>100_bases AGGAGAACCCTGAGATAGAATCAATAGATTTAAACCCGGTGATGGCCTACCCTAAGGGGGCTATAGCTGTCGACGCGAGG ATCATACTTAAACAGGGTTA
Downstream 100 bases:
>100_bases GACAATATTATCTACCAAACCTTCTTTCACGCCTCTGGTAACTTCTAATGGCTCTCCAGAAATCTATTTTACGGAATTCC GGCCAGAATACATCACAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MGELMTQTSIEEIQREIEEASKQISEVREKIKTLKEQRYRLINELKTERAEKQKYLGELRSLKEKLKNIREARKRLLEEY KRLAEERRNKIEELRTLREILVMKQNVIQNMSREARTPSNILREEIERLEWMLQTRVLSIEEENRVIQKIKRLTSLLEKA EKLRKEKNEILEVKAFYSSLRIQVKDLTSKLNNMRGEIGRLTAERDKIKQQLNELVKKYLDLKNDIQVKQDSVNAISKEI EDLTNKLNELREKVSNLNKELEKAKLGMVLNMKKQEILEKASGKKRLTIDELKIIYGEPEDFMEEQ
Sequences:
>Translated_306_residues MGELMTQTSIEEIQREIEEASKQISEVREKIKTLKEQRYRLINELKTERAEKQKYLGELRSLKEKLKNIREARKRLLEEY KRLAEERRNKIEELRTLREILVMKQNVIQNMSREARTPSNILREEIERLEWMLQTRVLSIEEENRVIQKIKRLTSLLEKA EKLRKEKNEILEVKAFYSSLRIQVKDLTSKLNNMRGEIGRLTAERDKIKQQLNELVKKYLDLKNDIQVKQDSVNAISKEI EDLTNKLNELREKVSNLNKELEKAKLGMVLNMKKQEILEKASGKKRLTIDELKIIYGEPEDFMEEQ >Mature_305_residues GELMTQTSIEEIQREIEEASKQISEVREKIKTLKEQRYRLINELKTERAEKQKYLGELRSLKEKLKNIREARKRLLEEYK RLAEERRNKIEELRTLREILVMKQNVIQNMSREARTPSNILREEIERLEWMLQTRVLSIEEENRVIQKIKRLTSLLEKAE KLRKEKNEILEVKAFYSSLRIQVKDLTSKLNNMRGEIGRLTAERDKIKQQLNELVKKYLDLKNDIQVKQDSVNAISKEIE DLTNKLNELREKVSNLNKELEKAKLGMVLNMKKQEILEKASGKKRLTIDELKIIYGEPEDFMEEQ
Specific function: Unknown
COG id: COG1340
COG function: function code S; Uncharacterized archaeal coiled-coil protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36563; Mature: 36432
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGELMTQTSIEEIQREIEEASKQISEVREKIKTLKEQRYRLINELKTERAEKQKYLGELR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLKEKLKNIREARKRLLEEYKRLAEERRNKIEELRTLREILVMKQNVIQNMSREARTPSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH ILREEIERLEWMLQTRVLSIEEENRVIQKIKRLTSLLEKAEKLRKEKNEILEVKAFYSSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIQVKDLTSKLNNMRGEIGRLTAERDKIKQQLNELVKKYLDLKNDIQVKQDSVNAISKEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH EDLTNKLNELREKVSNLNKELEKAKLGMVLNMKKQEILEKASGKKRLTIDELKIIYGEPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCH DFMEEQ HHCCCC >Mature Secondary Structure GELMTQTSIEEIQREIEEASKQISEVREKIKTLKEQRYRLINELKTERAEKQKYLGELR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLKEKLKNIREARKRLLEEYKRLAEERRNKIEELRTLREILVMKQNVIQNMSREARTPSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH ILREEIERLEWMLQTRVLSIEEENRVIQKIKRLTSLLEKAEKLRKEKNEILEVKAFYSSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIQVKDLTSKLNNMRGEIGRLTAERDKIKQQLNELVKKYLDLKNDIQVKQDSVNAISKEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH EDLTNKLNELREKVSNLNKELEKAKLGMVLNMKKQEILEKASGKKRLTIDELKIIYGEPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCH DFMEEQ HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA