Click here to switch to the map view.

The map label for this gene is yfiQ [C]

Identifier: 218884240

GI number: 218884240

Start: 882472

End: 883170

Strand: Reverse

Name: yfiQ [C]

Synonym: DKAM_0929

Alternate gene names: 218884240

Gene position: 883170-882472 (Counterclockwise)

Preceding gene: 218884241

Following gene: 218884239

Centisome position: 64.69

GC content: 45.06

Gene sequence:

>699_bases
ATGTCTCCACGTGACATATTAGCTGCAGCACTTAAGGAAAAAAGGTTCAAACTATTGGAGCATGAGGCGTTCCAAATAAT
TAAATACTATGGGATCCCATCCCCGGAGGTAGTGGTTGTTAAATCACCAGCAGAGGCAGTGGAGCTAGCTGATAAAATAG
GGTATCCAATAGCGTTGAAAATAGTGTCCCCGGATATAACACATAAGAGTGATGTAGGCGGTGTGAAACTAGGGCTCAAG
AGTAGAGAGGAGGTTGGAAAAGCGGTTGAAGAAATGCTTAGAACAGTGTCTCTTAAAGCACCAAATGCTAGACTAGTGGG
GGTGTTAATGTATAACATGGCTCCACAAGGACTCGAGGTAATTGTTGGCGGGGTGAGAGACGGCATATTTGGGCCAGTAA
TAATGTTCGGGCTGGGCGGTATATTCGTTGAGGTATTAAAGGATGTTTCATTCAGGATAGCCCCTATTACAAGGAACGAT
GCATTGGGAATGCTTAATGAGATCAAGTCGTCGAAAATACTCGAGGGCTACCGTGGCCAGCCGCCAGTCGATAAGGAGGC
CATAGCTGATATAATCGTTAAAACAGCTAGATTAATGGAGGAGAACCCTGAGATAGAATCAATAGATTTAAACCCGGTGA
TGGCCTACCCTAAGGGGGCTATAGCTGTCGACGCGAGGATCATACTTAAACAGGGTTAA

Upstream 100 bases:

>100_bases
CGTTTTCGAGTCGCCTGAAAGAGCTGCTAAAGCACTTAAAGTATTATATACTTATAGTAGAATAAAGTCCAATATACAAG
GATATCAGGGTTGAGGATGT

Downstream 100 bases:

>100_bases
TGGGAGAACTAATGACGCAAACAAGTATTGAGGAAATACAAAGAGAAATAGAAGAAGCATCAAAGCAGATCAGTGAGGTA
AGAGAGAAGATAAAGACGCT

Product: AcdB acetate--coA ligase beta chain

Products: ADP; phosphate; acetyl-CoA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MSPRDILAAALKEKRFKLLEHEAFQIIKYYGIPSPEVVVVKSPAEAVELADKIGYPIALKIVSPDITHKSDVGGVKLGLK
SREEVGKAVEEMLRTVSLKAPNARLVGVLMYNMAPQGLEVIVGGVRDGIFGPVIMFGLGGIFVEVLKDVSFRIAPITRND
ALGMLNEIKSSKILEGYRGQPPVDKEAIADIIVKTARLMEENPEIESIDLNPVMAYPKGAIAVDARIILKQG

Sequences:

>Translated_232_residues
MSPRDILAAALKEKRFKLLEHEAFQIIKYYGIPSPEVVVVKSPAEAVELADKIGYPIALKIVSPDITHKSDVGGVKLGLK
SREEVGKAVEEMLRTVSLKAPNARLVGVLMYNMAPQGLEVIVGGVRDGIFGPVIMFGLGGIFVEVLKDVSFRIAPITRND
ALGMLNEIKSSKILEGYRGQPPVDKEAIADIIVKTARLMEENPEIESIDLNPVMAYPKGAIAVDARIILKQG
>Mature_231_residues
SPRDILAAALKEKRFKLLEHEAFQIIKYYGIPSPEVVVVKSPAEAVELADKIGYPIALKIVSPDITHKSDVGGVKLGLKS
REEVGKAVEEMLRTVSLKAPNARLVGVLMYNMAPQGLEVIVGGVRDGIFGPVIMFGLGGIFVEVLKDVSFRIAPITRNDA
LGMLNEIKSSKILEGYRGQPPVDKEAIADIIVKTARLMEENPEIESIDLNPVMAYPKGAIAVDARIILKQG

Specific function: Unknown

COG id: COG1042

COG function: function code C; Acyl-CoA synthetase (NDP forming)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfiQ [H]

Homologues:

Organism=Escherichia coli, GI1788938, Length=226, Percent_Identity=32.3008849557522, Blast_Score=117, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014089
- InterPro:   IPR013650
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR005809
- InterPro:   IPR016102 [H]

Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]

EC number: 6.2.1.13

Molecular weight: Translated: 25198; Mature: 25067

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRDILAAALKEKRFKLLEHEAFQIIKYYGIPSPEVVVVKSPAEAVELADKIGYPIALK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCEEEE
IVSPDITHKSDVGGVKLGLKSREEVGKAVEEMLRTVSLKAPNARLVGVLMYNMAPQGLEV
EECCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHH
IVGGVRDGIFGPVIMFGLGGIFVEVLKDVSFRIAPITRNDALGMLNEIKSSKILEGYRGQ
EECHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCC
PPVDKEAIADIIVKTARLMEENPEIESIDLNPVMAYPKGAIAVDARIILKQG
CCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCCEEEEEEEEEECC
>Mature Secondary Structure 
SPRDILAAALKEKRFKLLEHEAFQIIKYYGIPSPEVVVVKSPAEAVELADKIGYPIALK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCEEEE
IVSPDITHKSDVGGVKLGLKSREEVGKAVEEMLRTVSLKAPNARLVGVLMYNMAPQGLEV
EECCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHH
IVGGVRDGIFGPVIMFGLGGIFVEVLKDVSFRIAPITRNDALGMLNEIKSSKILEGYRGQ
EECHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCC
PPVDKEAIADIIVKTARLMEENPEIESIDLNPVMAYPKGAIAVDARIILKQG
CCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; acetate; CoA

Specific reaction: ATP + acetate + CoA = ADP + phosphate + acetyl-CoA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]