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The map label for this gene is rps8e [H]

Identifier: 218884237

GI number: 218884237

Start: 880211

End: 880597

Strand: Reverse

Name: rps8e [H]

Synonym: DKAM_0926

Alternate gene names: 218884237

Gene position: 880597-880211 (Counterclockwise)

Preceding gene: 218884239

Following gene: 218884236

Centisome position: 64.5

GC content: 44.44

Gene sequence:

>387_bases
ATGTCTCACTATCAGGGTAATGATTTAAGAAAACCAACAGGTGGATTGAAAGGGGAGAAAAGGGGTAAGAGAAAATATGA
GCTAGGCTCCCCGCCGGTAAACACCACTCTAAGTAGCAGCGAGGAGAAGATACACGTGAGGACGTTTGGAGGAGGGGTAA
AGTATAAGTTAAAGAAGGCCTTATACATTAATATTGCGGTACCCGATGACAAGACGGTTAAGAAGGTCAAGATACTGGAC
GTCGTCGAGACACCATCAAATCCGCAGAACGCCAGGTTTAAAATTATCTCGAAAGGCACAATAGTGAAAACAGAATTAGG
ACTCGTAAAGGTTACATCAAGACCCGGACAAGACGGAGTCTTGAACGGGATCCTCCTTAAGAAGTAG

Upstream 100 bases:

>100_bases
ATTGGGTATAATAATTGTTAAGGAATATAACTACTGCTCTGCTCACAAAACATTTATAACCAGGTAATACTTGTTTTAAC
TAGAATACAGGTGTTTAGTG

Downstream 100 bases:

>100_bases
GCTGTGAGGGCCCTTGGATAGGATAATCACCAAGTATCAAGGGGGATTTTTTGAGTCGGGATAACAAAGGTAGGAGGATC
GTTGTATACCCGGCTTACAT

Product: 30S ribosomal protein S8e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MSHYQGNDLRKPTGGLKGEKRGKRKYELGSPPVNTTLSSSEEKIHVRTFGGGVKYKLKKALYINIAVPDDKTVKKVKILD
VVETPSNPQNARFKIISKGTIVKTELGLVKVTSRPGQDGVLNGILLKK

Sequences:

>Translated_128_residues
MSHYQGNDLRKPTGGLKGEKRGKRKYELGSPPVNTTLSSSEEKIHVRTFGGGVKYKLKKALYINIAVPDDKTVKKVKILD
VVETPSNPQNARFKIISKGTIVKTELGLVKVTSRPGQDGVLNGILLKK
>Mature_127_residues
SHYQGNDLRKPTGGLKGEKRGKRKYELGSPPVNTTLSSSEEKIHVRTFGGGVKYKLKKALYINIAVPDDKTVKKVKILDV
VETPSNPQNARFKIISKGTIVKTELGLVKVTSRPGQDGVLNGILLKK

Specific function: Unknown

COG id: COG2007

COG function: function code J; Ribosomal protein S8E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S8e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020919
- InterPro:   IPR001047
- InterPro:   IPR022309
- InterPro:   IPR018283 [H]

Pfam domain/function: PF01201 Ribosomal_S8e [H]

EC number: NA

Molecular weight: Translated: 14042; Mature: 13910

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: PS01193 RIBOSOMAL_S8E ; PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHYQGNDLRKPTGGLKGEKRGKRKYELGSPPVNTTLSSSEEKIHVRTFGGGVKYKLKKA
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEE
LYINIAVPDDKTVKKVKILDVVETPSNPQNARFKIISKGTIVKTELGLVKVTSRPGQDGV
EEEEEECCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCEEEEEECCEEEEECCCCCCCC
LNGILLKK
CCEEEECC
>Mature Secondary Structure 
SHYQGNDLRKPTGGLKGEKRGKRKYELGSPPVNTTLSSSEEKIHVRTFGGGVKYKLKKA
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEE
LYINIAVPDDKTVKKVKILDVVETPSNPQNARFKIISKGTIVKTELGLVKVTSRPGQDGV
EEEEEECCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCEEEEEECCEEEEECCCCCCCC
LNGILLKK
CCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA