| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218884230
Identifier: 218884230
GI number: 218884230
Start: 873884
End: 874582
Strand: Reverse
Name: 218884230
Synonym: DKAM_0919
Alternate gene names: NA
Gene position: 874582-873884 (Counterclockwise)
Preceding gene: 218884233
Following gene: 218884228
Centisome position: 64.06
GC content: 49.07
Gene sequence:
>699_bases GTGTTACAGGTGGGAGCCTTGAGCGATGAATACAAGAAACTGGTTGAAGAACTAGTCTACAAGGTGAAAGTCGAAGTAGA TTCTCTCGAGGCTAGGGTTAGAGAAGCTATCGAGAAAGGGGATAGGGAGGCAGCTCTAAAATCCCTCAGGGAGGGCGTGG AGAATGTTCTTAGGGAAATAGCCGATTCCACGAAGAAGCTTGAAGAATACGGGGGTAGGGTTGAGAATAGTGTTCTCGAG AAAGCTCTAGAAGACTTTAGAACAGGGCTTAGGCAACAGCTCGAGAGGGTAAGGTCTATTGTTGAGACAGTGTCGGAGAG GTACGGTAGGAGAGCTGTAGAATCCGCTTTAAGCGTCAGCGACACTATCTCTAGGAGCCTCGCCGAGATAGCGTCTACTG CTACAAAGCTCGCGCAAGACTTTGCTGAAAGGGTTGCCGAGGTAGTAGGCAGGATAGCTAGGCTACCCGGGACTACGCTA GTTGTATCTGCGAGGGTTAGGAAGGAGGACATGGAGGTAATAGACAAACTCGTAGAAGCAGGAGTATTCAAGAGCAGGAG CGAGGCTATAGCCTACTTCACTAGGAAAGGTATTGAAGCGAGCAGGGATTGGATTGAGAAAGCCCTTGAGAAAGCAGAGA AGATTAGGGAGCTTGCGAGAGACTTGAGGAAGGATGTCGAAGAATACTTGGAGAAGTAG
Upstream 100 bases:
>100_bases ACTAGTATACCCCCCTCTTATACAAAACTATTAATGTAATATGCTGGGCCACCTTGTCAAGTTTTTAAACCCTTCCTGTA GTAGTGTAATATTGTAATAT
Downstream 100 bases:
>100_bases CCCTAACTAGCCCTGTAGGACATGATTCGGGTCTGGTGAATACCTGTGATTGCCTGTAGATATTTCTGGCTACCTGCTTC ACCCCTCATGTATGATTCCC
Product: Putative M protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MLQVGALSDEYKKLVEELVYKVKVEVDSLEARVREAIEKGDREAALKSLREGVENVLREIADSTKKLEEYGGRVENSVLE KALEDFRTGLRQQLERVRSIVETVSERYGRRAVESALSVSDTISRSLAEIASTATKLAQDFAERVAEVVGRIARLPGTTL VVSARVRKEDMEVIDKLVEAGVFKSRSEAIAYFTRKGIEASRDWIEKALEKAEKIRELARDLRKDVEEYLEK
Sequences:
>Translated_232_residues MLQVGALSDEYKKLVEELVYKVKVEVDSLEARVREAIEKGDREAALKSLREGVENVLREIADSTKKLEEYGGRVENSVLE KALEDFRTGLRQQLERVRSIVETVSERYGRRAVESALSVSDTISRSLAEIASTATKLAQDFAERVAEVVGRIARLPGTTL VVSARVRKEDMEVIDKLVEAGVFKSRSEAIAYFTRKGIEASRDWIEKALEKAEKIRELARDLRKDVEEYLEK >Mature_232_residues MLQVGALSDEYKKLVEELVYKVKVEVDSLEARVREAIEKGDREAALKSLREGVENVLREIADSTKKLEEYGGRVENSVLE KALEDFRTGLRQQLERVRSIVETVSERYGRRAVESALSVSDTISRSLAEIASTATKLAQDFAERVAEVVGRIARLPGTTL VVSARVRKEDMEVIDKLVEAGVFKSRSEAIAYFTRKGIEASRDWIEKALEKAEKIRELARDLRKDVEEYLEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26261; Mature: 26261
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQVGALSDEYKKLVEELVYKVKVEVDSLEARVREAIEKGDREAALKSLREGVENVLREI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH ADSTKKLEEYGGRVENSVLEKALEDFRTGLRQQLERVRSIVETVSERYGRRAVESALSVS HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DTISRSLAEIASTATKLAQDFAERVAEVVGRIARLPGTTLVVSARVRKEDMEVIDKLVEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH GVFKSRSEAIAYFTRKGIEASRDWIEKALEKAEKIRELARDLRKDVEEYLEK HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MLQVGALSDEYKKLVEELVYKVKVEVDSLEARVREAIEKGDREAALKSLREGVENVLREI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH ADSTKKLEEYGGRVENSVLEKALEDFRTGLRQQLERVRSIVETVSERYGRRAVESALSVS HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DTISRSLAEIASTATKLAQDFAERVAEVVGRIARLPGTTLVVSARVRKEDMEVIDKLVEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH GVFKSRSEAIAYFTRKGIEASRDWIEKALEKAEKIRELARDLRKDVEEYLEK HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA