| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884213
Identifier: 218884213
GI number: 218884213
Start: 859251
End: 859877
Strand: Direct
Name: 218884213
Synonym: DKAM_0902
Alternate gene names: NA
Gene position: 859251-859877 (Clockwise)
Preceding gene: 218884194
Following gene: 218884214
Centisome position: 62.94
GC content: 43.7
Gene sequence:
>627_bases ATGTACAGCGAGCTATATAGTTGCCCGCTTACAGTAATCCTAGGAACCTTTACGTACAGGGGGTATAAGGGGTGGTCGGT GTTACCAATACTCAACTACAGGGTATCAATACTCAGAAGGGGCGATGTATGGAGGACTGTGACAAATATACGTGAGCCTC AATGGTATAAGAGATGCCTCGATACATGTAGAAGCATCGCAGATGGCATTAAATCAACCGGTAACATCGCGATGGATCTC TCATTAAACGCGTCATTCTACGGTGGAATAGGCACTTATATTCTCTTAGAGACTGGCTTAAGACCGCTATCCCTCGACAT AGTTAACACCATGGTGTTTAAATTCTACCTGAAGCCGTACACCAGTGGAGGCAGCTATGTAGAAGGAAGGTTAGAAGACT GGTTGCTTTTACAAACAGGTTTAAGAGAGGGATTAATGAAACCAGTCTTAGATGCCTGTGAAAGCCTTGGATCGGTTAAG GACGATACATGCATAATCAACAGCGATTTAGGTGAGGTGGCGATAACACATGAATACATCAATGAAGACGATTGGCTACA TATAGTACCCGATAACTCACCGTTTAGACACGTTTTAACCCTTGAAACCCGTGTCAACCGATCTTAA
Upstream 100 bases:
>100_bases CATGTTAAACACCGTTGTTTTTCCTATAATAAAGTTAGGTTAATAATTATTAAACATTATCTCTAGTGAAATAGTGGTAT AAAGGTTGTAAACCATGTGG
Downstream 100 bases:
>100_bases AGATGACCCGCTGTATAAACAAGTTATAATAGGGTTAAAACCAATCGATTATGGTAGGGAGTAGTGGTGGGAAAATAATG AAGAACAAGGAGAAAGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MYSELYSCPLTVILGTFTYRGYKGWSVLPILNYRVSILRRGDVWRTVTNIREPQWYKRCLDTCRSIADGIKSTGNIAMDL SLNASFYGGIGTYILLETGLRPLSLDIVNTMVFKFYLKPYTSGGSYVEGRLEDWLLLQTGLREGLMKPVLDACESLGSVK DDTCIINSDLGEVAITHEYINEDDWLHIVPDNSPFRHVLTLETRVNRS
Sequences:
>Translated_208_residues MYSELYSCPLTVILGTFTYRGYKGWSVLPILNYRVSILRRGDVWRTVTNIREPQWYKRCLDTCRSIADGIKSTGNIAMDL SLNASFYGGIGTYILLETGLRPLSLDIVNTMVFKFYLKPYTSGGSYVEGRLEDWLLLQTGLREGLMKPVLDACESLGSVK DDTCIINSDLGEVAITHEYINEDDWLHIVPDNSPFRHVLTLETRVNRS >Mature_208_residues MYSELYSCPLTVILGTFTYRGYKGWSVLPILNYRVSILRRGDVWRTVTNIREPQWYKRCLDTCRSIADGIKSTGNIAMDL SLNASFYGGIGTYILLETGLRPLSLDIVNTMVFKFYLKPYTSGGSYVEGRLEDWLLLQTGLREGLMKPVLDACESLGSVK DDTCIINSDLGEVAITHEYINEDDWLHIVPDNSPFRHVLTLETRVNRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23632; Mature: 23632
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSELYSCPLTVILGTFTYRGYKGWSVLPILNYRVSILRRGDVWRTVTNIREPQWYKRCL CCCCHHHCHHHHHHHHHEECCCCCCEEEEHHHHHEEEHCCCCHHHHHHHCCCCHHHHHHH DTCRSIADGIKSTGNIAMDLSLNASFYGGIGTYILLETGLRPLSLDIVNTMVFKFYLKPY HHHHHHHHHHCCCCCEEEEEEECCEEECCHHHEEEEECCCCCCHHHHHHHHHHHHHHCCC TSGGSYVEGRLEDWLLLQTGLREGLMKPVLDACESLGSVKDDTCIINSDLGEVAITHEYI CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEHHHC NEDDWLHIVPDNSPFRHVLTLETRVNRS CCCCEEEECCCCCCCEEEEEEEECCCCC >Mature Secondary Structure MYSELYSCPLTVILGTFTYRGYKGWSVLPILNYRVSILRRGDVWRTVTNIREPQWYKRCL CCCCHHHCHHHHHHHHHEECCCCCCEEEEHHHHHEEEHCCCCHHHHHHHCCCCHHHHHHH DTCRSIADGIKSTGNIAMDLSLNASFYGGIGTYILLETGLRPLSLDIVNTMVFKFYLKPY HHHHHHHHHHCCCCCEEEEEEECCEEECCHHHEEEEECCCCCCHHHHHHHHHHHHHHCCC TSGGSYVEGRLEDWLLLQTGLREGLMKPVLDACESLGSVKDDTCIINSDLGEVAITHEYI CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEHHHC NEDDWLHIVPDNSPFRHVLTLETRVNRS CCCCEEEECCCCCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA