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The map label for this gene is ynbC [H]

Identifier: 218884194

GI number: 218884194

Start: 846724

End: 847578

Strand: Direct

Name: ynbC [H]

Synonym: DKAM_0883

Alternate gene names: 218884194

Gene position: 846724-847578 (Clockwise)

Preceding gene: 218884189

Following gene: 218884213

Centisome position: 62.02

GC content: 45.03

Gene sequence:

>855_bases
ATGAAATACATACATGTGGGAGCCATGTATAAAGAAGGCTACGTTGAACTACCCACCGGATTAAACACTTTCTACAGGAG
CTGGCTACCGGAGGATAAAGCCAGGGGACTCGTAATCGGTGTACATGGATTCGCGGAGCACAGTGGAAGATATCTGCATG
TAGGCGAGGCATTAAGTAGGTACAACTATGCATTCTACATCCATGATTTAAGAGGGCATGGCAAGAGCAGGGGAGAGGAA
CCCGGCTACATAGATAGCTTTAACGAGTTCATAGATGACCTAGACTCATTCATGGACTATGCAATCAGGGACTCAGGTAT
ACAGGGCACTATACTATTAGGACATAGTATGGGTGGGTTAATCGTTCTCCACTATCTGGCTAAAAGACGCAGGAGGGTTA
AAGCCGCTGTCGTCACCGGGGCCGCTACATTGATTATATACCCGGTTCTACAGAGAATCCTCCTTGAATTAATGAGCATG
CTAAGCCCGAGGAAGAGGATAGATTTACCGATAGATCCTGGACTATTATCGAGTGATCCAAGCGTCGGGGAGAAATACGC
CATGGACGAACTAGTGTTAAAGAAGCCAACTCTCAAGCTAATATATGAATTATACAGGGCATCGAAGGAGATCTGGAGGA
TTGTCGAAGAGATAGACACACCGGTACTGATAATACATGGAGAAAACGATAGAATAGTGAACCCCGAGGGTAGTCGTAGA
CTATATGATAGGCTACGCGTAAGCGATAAGGAATTAAAGATATACCCGGGAATGCGCCATGAAGTCCTCAACGAGCCAGA
ATGGTTGAAGGTATTGGAGGATATAATAGAATGGATTAATAAACACGTTCAGTGA

Upstream 100 bases:

>100_bases
ATCACTCAAGACCGGTACCTCCTGATATCTAGATCAACACCTGAGGAATTTAAACAGTATCAAAGAACCCGTGTAGTAAA
AGCTAATATATTTGCTAAGG

Downstream 100 bases:

>100_bases
CACCACAACTGAAAAGATCTAGGTCCCTTCATGGCGGGAATGAGATCAGAGCATGGATTATGATCGACCATGAGATACCT
CTGTCCCCCCTTCCCAGCCC

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKYIHVGAMYKEGYVELPTGLNTFYRSWLPEDKARGLVIGVHGFAEHSGRYLHVGEALSRYNYAFYIHDLRGHGKSRGEE
PGYIDSFNEFIDDLDSFMDYAIRDSGIQGTILLGHSMGGLIVLHYLAKRRRRVKAAVVTGAATLIIYPVLQRILLELMSM
LSPRKRIDLPIDPGLLSSDPSVGEKYAMDELVLKKPTLKLIYELYRASKEIWRIVEEIDTPVLIIHGENDRIVNPEGSRR
LYDRLRVSDKELKIYPGMRHEVLNEPEWLKVLEDIIEWINKHVQ

Sequences:

>Translated_284_residues
MKYIHVGAMYKEGYVELPTGLNTFYRSWLPEDKARGLVIGVHGFAEHSGRYLHVGEALSRYNYAFYIHDLRGHGKSRGEE
PGYIDSFNEFIDDLDSFMDYAIRDSGIQGTILLGHSMGGLIVLHYLAKRRRRVKAAVVTGAATLIIYPVLQRILLELMSM
LSPRKRIDLPIDPGLLSSDPSVGEKYAMDELVLKKPTLKLIYELYRASKEIWRIVEEIDTPVLIIHGENDRIVNPEGSRR
LYDRLRVSDKELKIYPGMRHEVLNEPEWLKVLEDIIEWINKHVQ
>Mature_284_residues
MKYIHVGAMYKEGYVELPTGLNTFYRSWLPEDKARGLVIGVHGFAEHSGRYLHVGEALSRYNYAFYIHDLRGHGKSRGEE
PGYIDSFNEFIDDLDSFMDYAIRDSGIQGTILLGHSMGGLIVLHYLAKRRRRVKAAVVTGAATLIIYPVLQRILLELMSM
LSPRKRIDLPIDPGLLSSDPSVGEKYAMDELVLKKPTLKLIYELYRASKEIWRIVEEIDTPVLIIHGENDRIVNPEGSRR
LYDRLRVSDKELKIYPGMRHEVLNEPEWLKVLEDIIEWINKHVQ

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI51242953, Length=280, Percent_Identity=28.2142857142857, Blast_Score=104, Evalue=8e-23,
Organism=Homo sapiens, GI6005786, Length=280, Percent_Identity=28.2142857142857, Blast_Score=104, Evalue=1e-22,
Organism=Escherichia coli, GI1787678, Length=269, Percent_Identity=28.6245353159851, Blast_Score=104, Evalue=7e-24,
Organism=Saccharomyces cerevisiae, GI6322756, Length=272, Percent_Identity=27.9411764705882, Blast_Score=114, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022742
- InterPro:   IPR022744 [H]

Pfam domain/function: PF12146 Hydrolase_4; PF12147 Hydrolase_5 [H]

EC number: NA

Molecular weight: Translated: 32734; Mature: 32734

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYIHVGAMYKEGYVELPTGLNTFYRSWLPEDKARGLVIGVHGFAEHSGRYLHVGEALSR
CCEEEEEEEECCCCEECCCCHHHHHHHHCCCCCCCEEEEEECCHHHHCCCEEEHHHHHHH
YNYAFYIHDLRGHGKSRGEEPGYIDSFNEFIDDLDSFMDYAIRDSGIQGTILLGHSMGGL
CCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHH
IVLHYLAKRRRRVKAAVVTGAATLIIYPVLQRILLELMSMLSPRKRIDLPIDPGLLSSDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCC
SVGEKYAMDELVLKKPTLKLIYELYRASKEIWRIVEEIDTPVLIIHGENDRIVNPEGSRR
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEECCCCHHH
LYDRLRVSDKELKIYPGMRHEVLNEPEWLKVLEDIIEWINKHVQ
HHHHHCCCCCCEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKYIHVGAMYKEGYVELPTGLNTFYRSWLPEDKARGLVIGVHGFAEHSGRYLHVGEALSR
CCEEEEEEEECCCCEECCCCHHHHHHHHCCCCCCCEEEEEECCHHHHCCCEEEHHHHHHH
YNYAFYIHDLRGHGKSRGEEPGYIDSFNEFIDDLDSFMDYAIRDSGIQGTILLGHSMGGL
CCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHH
IVLHYLAKRRRRVKAAVVTGAATLIIYPVLQRILLELMSMLSPRKRIDLPIDPGLLSSDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCC
SVGEKYAMDELVLKKPTLKLIYELYRASKEIWRIVEEIDTPVLIIHGENDRIVNPEGSRR
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEECCCCHHH
LYDRLRVSDKELKIYPGMRHEVLNEPEWLKVLEDIIEWINKHVQ
HHHHHCCCCCCEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]