| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883777
Identifier: 218883777
GI number: 218883777
Start: 434606
End: 435184
Strand: Reverse
Name: 218883777
Synonym: DKAM_0466
Alternate gene names: NA
Gene position: 435184-434606 (Counterclockwise)
Preceding gene: 218883778
Following gene: 218883775
Centisome position: 31.88
GC content: 46.46
Gene sequence:
>579_bases TTGTCATTGAACACCAGGTATATTCTAAACCTGCGCCACATACCCAGAACCGGCTGGCTTCTGAGAGGTGTACCCCCCGT TATCGCGGAGAGTGTTGCCGAGCATATCTTCCTTACATCAATCATAGCGATGGATATAGCTGAGAAACTATGGTCGAGGA ATATCAGGCTCGATAAAGCGCGCACTCTATCCATGAGTATAATACATGATGTACCAGAGGCGGTCACAGGCGACATAATA AGGCTTGTCAAAGCTAACGCGGAGGAATACTTCTCGATAATAGAGTCCCAAGCGATCAAAGAGCTGGGTATACAGGAGTA TGAATCCCTTTACAACGAGCTCTCAAGCGGTGAAACCCTTGAATCCATAGTGGTTAAAGTAGCCGACGATGTCGCAACCA TCCTCGAGGGAAGAAGGCTGATGGAGATGGGGTATCATCAGGTTGAGGAGATAATTGTTAATGTAGAGGTACATCTAAGG GAACTGGTTAATGCGAAGACACCTGTAGAGGTAAAAGACGTCCTCTGGGAGATAGTGAGTGAGTACCTGGATGCATCTGT CTTCAGTAAACAAAAGTAG
Upstream 100 bases:
>100_bases CGGAGTTCTTTGAGAAGACTAGGAAGCGGGCTGTAGCGGTGAAGGTTGCAAGCCGGGATCTATGGGATGAGATACTGGGC TTCTGAGCCAGTAGGGTGTA
Downstream 100 bases:
>100_bases TTTCAGTCCTCTGGCATCCCCCTCTCCTGAAGAGTGTTGCCTCGGCTGTAACACGCTATTTAATATTGTTTTTCAAGGAG TCTACACCATAGCCAAGGTG
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: Metal-Dependent Phosphohydrolase HD Superfamily; Metal-Dependent Phosphohydrolase; HAD Superfamily Hydrolase; HD Superfamily Hydrolase; Hydrolase Of HD Superfamily; Oxetanocin-Like Protein
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MSLNTRYILNLRHIPRTGWLLRGVPPVIAESVAEHIFLTSIIAMDIAEKLWSRNIRLDKARTLSMSIIHDVPEAVTGDII RLVKANAEEYFSIIESQAIKELGIQEYESLYNELSSGETLESIVVKVADDVATILEGRRLMEMGYHQVEEIIVNVEVHLR ELVNAKTPVEVKDVLWEIVSEYLDASVFSKQK
Sequences:
>Translated_192_residues MSLNTRYILNLRHIPRTGWLLRGVPPVIAESVAEHIFLTSIIAMDIAEKLWSRNIRLDKARTLSMSIIHDVPEAVTGDII RLVKANAEEYFSIIESQAIKELGIQEYESLYNELSSGETLESIVVKVADDVATILEGRRLMEMGYHQVEEIIVNVEVHLR ELVNAKTPVEVKDVLWEIVSEYLDASVFSKQK >Mature_191_residues SLNTRYILNLRHIPRTGWLLRGVPPVIAESVAEHIFLTSIIAMDIAEKLWSRNIRLDKARTLSMSIIHDVPEAVTGDIIR LVKANAEEYFSIIESQAIKELGIQEYESLYNELSSGETLESIVVKVADDVATILEGRRLMEMGYHQVEEIIVNVEVHLRE LVNAKTPVEVKDVLWEIVSEYLDASVFSKQK
Specific function: Unknown
COG id: COG1896
COG function: function code R; Predicted hydrolases of HD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21830; Mature: 21698
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNTRYILNLRHIPRTGWLLRGVPPVIAESVAEHIFLTSIIAMDIAEKLWSRNIRLDKA CCCCCEEEEEECCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH RTLSMSIIHDVPEAVTGDIIRLVKANAEEYFSIIESQAIKELGIQEYESLYNELSSGETL HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHH ESIVVKVADDVATILEGRRLMEMGYHQVEEIIVNVEVHLRELVNAKTPVEVKDVLWEIVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH EYLDASVFSKQK HHHHHHHHCCCC >Mature Secondary Structure SLNTRYILNLRHIPRTGWLLRGVPPVIAESVAEHIFLTSIIAMDIAEKLWSRNIRLDKA CCCCEEEEEECCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH RTLSMSIIHDVPEAVTGDIIRLVKANAEEYFSIIESQAIKELGIQEYESLYNELSSGETL HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHH ESIVVKVADDVATILEGRRLMEMGYHQVEEIIVNVEVHLRELVNAKTPVEVKDVLWEIVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH EYLDASVFSKQK HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA