Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883774

Identifier: 218883774

GI number: 218883774

Start: 432422

End: 432853

Strand: Reverse

Name: 218883774

Synonym: DKAM_0463

Alternate gene names: NA

Gene position: 432853-432422 (Counterclockwise)

Preceding gene: 218883775

Following gene: 218883772

Centisome position: 31.71

GC content: 47.22

Gene sequence:

>432_bases
GTGAAGGGGGTTACACACCTGCTTCTCGGTGCTGCAGTAGGCTTATACATAGGTTATGATGCATTATCCTCCATCGCGGC
CTCCATGATATCCGGGGCATCGGCTCTGATACCGGATCTCGACCTACACCTAGGGCACCGTAAAACATTGCACAATATAT
TTGCGCTAGCGGTGTTCACAATCGTGGTGACGATAATCCTAGATCACATCGGAGTGAGAAACGAGCTGATCCCCAAGGCG
GTGGCGCTTGGATGGCTCACGCATATATTAAGCGATGTTCTCAATATCCAGGGAGTACACTTATTCTACCCGTTCTCAGA
ATACTCGATCTCCCTGAAGATAGCTAGAAGCGATAGTATAGTGCTGAATATACTGGTATCCCTCATATCCATAATACTAA
TCGCACTGAGAATCCTCCAGTTCACATATTGA

Upstream 100 bases:

>100_bases
CAGGTATATTCCCTTCAAACCTGGTTGACATCGTTGTGGTCGGGGAACCAGCCGGGGTCAGGGTGCTTGGAAAAAACACT
GGTGGGAGGGAGTAGGGGTA

Downstream 100 bases:

>100_bases
GTCAGCAACTATTAACTTACCCTTGACACGTATAGGGCTGGATGGATGATTATGGGATATTTGAAAAATCCTTAAGTTCA
CTCTATTGTTTCCTACTTAC

Product: putative membrane-bound metal-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKGVTHLLLGAAVGLYIGYDALSSIAASMISGASALIPDLDLHLGHRKTLHNIFALAVFTIVVTIILDHIGVRNELIPKA
VALGWLTHILSDVLNIQGVHLFYPFSEYSISLKIARSDSIVLNILVSLISIILIALRILQFTY

Sequences:

>Translated_143_residues
MKGVTHLLLGAAVGLYIGYDALSSIAASMISGASALIPDLDLHLGHRKTLHNIFALAVFTIVVTIILDHIGVRNELIPKA
VALGWLTHILSDVLNIQGVHLFYPFSEYSISLKIARSDSIVLNILVSLISIILIALRILQFTY
>Mature_143_residues
MKGVTHLLLGAAVGLYIGYDALSSIAASMISGASALIPDLDLHLGHRKTLHNIFALAVFTIVVTIILDHIGVRNELIPKA
VALGWLTHILSDVLNIQGVHLFYPFSEYSISLKIARSDSIVLNILVSLISIILIALRILQFTY

Specific function: Unknown

COG id: COG1988

COG function: function code R; Predicted membrane-bound metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15541; Mature: 15541

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGVTHLLLGAAVGLYIGYDALSSIAASMISGASALIPDLDLHLGHRKTLHNIFALAVFT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHCCHHHHHHHHHHHHHHH
IVVTIILDHIGVRNELIPKAVALGWLTHILSDVLNIQGVHLFYPFSEYSISLKIARSDSI
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCHH
VLNILVSLISIILIALRILQFTY
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKGVTHLLLGAAVGLYIGYDALSSIAASMISGASALIPDLDLHLGHRKTLHNIFALAVFT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHCCHHHHHHHHHHHHHHH
IVVTIILDHIGVRNELIPKAVALGWLTHILSDVLNIQGVHLFYPFSEYSISLKIARSDSI
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCHH
VLNILVSLISIILIALRILQFTY
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA