| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218883769
Identifier: 218883769
GI number: 218883769
Start: 427660
End: 427959
Strand: Reverse
Name: 218883769
Synonym: DKAM_0458
Alternate gene names: NA
Gene position: 427959-427660 (Counterclockwise)
Preceding gene: 218883770
Following gene: 218883768
Centisome position: 31.35
GC content: 43.0
Gene sequence:
>300_bases ATGTCCAATATATTAAAGATGAAGCAGGGGATAGTGAGACTAATAGATGAATCAAGCGAGCAAGCCTATAAGATAGCCTT CTATTCAAATCCTGATGTAAGTAGGATACTGGAGAGGCTAATAGCTGAGTGGGAGAGGAATAATCGGAAGGGGATACCCC TCGATTATGCAACGGAGGAGGAAGTAGAGGTAATGTATAATATAGCTGTCAAGATATCCAAGACGCCTCCCCAGGCATTA ATGTCAACGTATCTCAGCGAGATAATGCCTTCTAGTAGCGGGGAAAAGAAGAAGAGGTGA
Upstream 100 bases:
>100_bases CTCGTGCTCATGGAGAGGCTTGGCTGGGCACTAGAAAAGATTAAACAGGGTTTATCAATATCTACAATAAGGTTTGAGGA CTTGTTGGAGTAAGATGTGT
Downstream 100 bases:
>100_bases CACCTGTGAGTGAGGAGTTAAAGAAGAAGATAGTCGAGGTATTAGAAACCATAACAGACCCTGAGATAGGGATCGACGTC TACAACCTAGGGTTAATCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MSNILKMKQGIVRLIDESSEQAYKIAFYSNPDVSRILERLIAEWERNNRKGIPLDYATEEEVEVMYNIAVKISKTPPQAL MSTYLSEIMPSSSGEKKKR
Sequences:
>Translated_99_residues MSNILKMKQGIVRLIDESSEQAYKIAFYSNPDVSRILERLIAEWERNNRKGIPLDYATEEEVEVMYNIAVKISKTPPQAL MSTYLSEIMPSSSGEKKKR >Mature_98_residues SNILKMKQGIVRLIDESSEQAYKIAFYSNPDVSRILERLIAEWERNNRKGIPLDYATEEEVEVMYNIAVKISKTPPQALM STYLSEIMPSSSGEKKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11398; Mature: 11267
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNILKMKQGIVRLIDESSEQAYKIAFYSNPDVSRILERLIAEWERNNRKGIPLDYATEE CCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHH EVEVMYNIAVKISKTPPQALMSTYLSEIMPSSSGEKKKR HHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SNILKMKQGIVRLIDESSEQAYKIAFYSNPDVSRILERLIAEWERNNRKGIPLDYATEE CHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHH EVEVMYNIAVKISKTPPQALMSTYLSEIMPSSSGEKKKR HHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA