Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is yitW [H]

Identifier: 218883768

GI number: 218883768

Start: 427295

End: 427654

Strand: Reverse

Name: yitW [H]

Synonym: DKAM_0457

Alternate gene names: 218883768

Gene position: 427654-427295 (Counterclockwise)

Preceding gene: 218883769

Following gene: 218883767

Centisome position: 31.32

GC content: 44.17

Gene sequence:

>360_bases
GTGAGTGAGGAGTTAAAGAAGAAGATAGTCGAGGTATTAGAAACCATAACAGACCCTGAGATAGGGATCGACGTCTACAA
CCTAGGGTTAATCTATGATATACAAGTTGTCAACGATAAGACGGTTAAGATAACAATGTCCTTTACAACCATGTTCTGCC
CCCTTGCCTCCACACTCCCATTAATGATAATTGATGCATTGAAGGAGAAGCTTGGCATAGACGCCGATATAGATATAGCG
TATGACCCACCGTGGACACCCCTCAGGATGACGGAGAAAGGTAGGGTATTGTTCAAGGAGAGATTCGGCTACGATATAGT
GGAGGAATATGCTAGGAGCCAGCAGGAAACAAGAGAATAG

Upstream 100 bases:

>100_bases
CTGTCAAGATATCCAAGACGCCTCCCCAGGCATTAATGTCAACGTATCTCAGCGAGATAATGCCTTCTAGTAGCGGGGAA
AAGAAGAAGAGGTGACACCT

Downstream 100 bases:

>100_bases
CTTGAATCTTTTTTAATCAAGCCTGTTAAAACACATTTTTATTTTTAAAGATTATTGAATCATGTTGAGTAGGCATGGTG
GATTAATGTGTCTTGGAGTA

Product: FeS assembly SUF system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MSEELKKKIVEVLETITDPEIGIDVYNLGLIYDIQVVNDKTVKITMSFTTMFCPLASTLPLMIIDALKEKLGIDADIDIA
YDPPWTPLRMTEKGRVLFKERFGYDIVEEYARSQQETRE

Sequences:

>Translated_119_residues
MSEELKKKIVEVLETITDPEIGIDVYNLGLIYDIQVVNDKTVKITMSFTTMFCPLASTLPLMIIDALKEKLGIDADIDIA
YDPPWTPLRMTEKGRVLFKERFGYDIVEEYARSQQETRE
>Mature_118_residues
SEELKKKIVEVLETITDPEIGIDVYNLGLIYDIQVVNDKTVKITMSFTTMFCPLASTLPLMIIDALKEKLGIDADIDIAY
DPPWTPLRMTEKGRVLFKERFGYDIVEEYARSQQETRE

Specific function: Unknown

COG id: COG2151

COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MIP18 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002744 [H]

Pfam domain/function: PF01883 DUF59 [H]

EC number: NA

Molecular weight: Translated: 13707; Mature: 13576

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS01037 SBP_BACTERIAL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEELKKKIVEVLETITDPEIGIDVYNLGLIYDIQVVNDKTVKITMSFTTMFCPLASTLP
CCHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEEEECCCEEEEEEEHHHHHHHHHHHHH
LMIIDALKEKLGIDADIDIAYDPPWTPLRMTEKGRVLFKERFGYDIVEEYARSQQETRE
HHHHHHHHHHHCCCCCCEEEECCCCCCEEECCCCCCHHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SEELKKKIVEVLETITDPEIGIDVYNLGLIYDIQVVNDKTVKITMSFTTMFCPLASTLP
CHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEEEECCCEEEEEEEHHHHHHHHHHHHH
LMIIDALKEKLGIDADIDIAYDPPWTPLRMTEKGRVLFKERFGYDIVEEYARSQQETRE
HHHHHHHHHHHCCCCCCEEEECCCCCCEEECCCCCCHHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9025291; 9384377 [H]