Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883753

Identifier: 218883753

GI number: 218883753

Start: 411131

End: 412018

Strand: Reverse

Name: 218883753

Synonym: DKAM_0442

Alternate gene names: NA

Gene position: 412018-411131 (Counterclockwise)

Preceding gene: 218883754

Following gene: 218883752

Centisome position: 30.18

GC content: 49.1

Gene sequence:

>888_bases
ATGGGAGTTAGATCAATGTCTACATTCATATCAACCCATGACGTCAGGATACATATTGACCCGGCTGTCTCACTAGCCCC
CAGGAGATACGGATTGCCTCCGCACCCCAGGGAAGTTGATAGACTAATTATGGCTGGAAGGGAGATCGAGGAGGCTGCGT
ACAAGGCTGACGTTATAATCATAACACACTACCACTACGACCACCACGACCCCGGCTTTCTTATATCTCTCGACATATAC
CGTGATAAGATCATCTACGTGAAGGACCCTGTAAACAATATTAATGTAAGCCAGAGGATCCGTGCATCAAGGTTCCTTAA
GCAGGTTAAAGAGCTGGCTAGGGAGGTTCATGTAGCCGAGGGAAGCATGGTTAGATTCGGGGATACAGTGGTAAAGATGA
GCCAGGCTGTGCCCCATGGACCAAGCACTAGGCTTGGATACGTTGTAGAGGTGAGTATTAGACATGGGGACAAGGTATTC
CTGTACACAAGCGATGTGGAGGGACCCTGTCTAGAGGAGCACATGGGCTTCATACTGGAGGAGAAGCCGGGTATCATAGT
GGTTGACGGAGCCCTCTCATACATGCTTGGCTACAGGTACTCCGTTAAGAGCCTCGAGGCCAGCATCGATAACTTGAAAA
AGATTATTGATGTCGGGGTAAAGACAGTTATCGTGGACCATCATCTCCTCCGCGACCTCAAATACAGGGAGAGAATGGCT
GAAGTCATTGAATACGGGTCGAAGCATGATGTAAGGGTTATCACTGCTGCTGAGTACATGGGCAGACCAATCGAGCAGTT
AGAGGCATTAAGGAATAAGCTCTACGAGGAGGAGCCTGTCAAGGAGCCCTCTATCCCCGAGAACCTAAGGGATCTCTTGG
AAGAATAG

Upstream 100 bases:

>100_bases
TACTGTAGCTGGCTGAGTGTTTTATATTTTGGTCTAATCTAGATTATATCTTGTGTGAGCGTGGAGGGTCTTGGAGGTAA
GGCTTCTGGCTTTTGATAGT

Downstream 100 bases:

>100_bases
TGCTTGAAAACAATATATGACTGATATATAGTACATGGATAAATATATGTGTTTGGCGAATCTAACATGAGGAGATATGA
TGTAGTCGTGGTAGGCGGTG

Product: putative hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MGVRSMSTFISTHDVRIHIDPAVSLAPRRYGLPPHPREVDRLIMAGREIEEAAYKADVIIITHYHYDHHDPGFLISLDIY
RDKIIYVKDPVNNINVSQRIRASRFLKQVKELAREVHVAEGSMVRFGDTVVKMSQAVPHGPSTRLGYVVEVSIRHGDKVF
LYTSDVEGPCLEEHMGFILEEKPGIIVVDGALSYMLGYRYSVKSLEASIDNLKKIIDVGVKTVIVDHHLLRDLKYRERMA
EVIEYGSKHDVRVITAAEYMGRPIEQLEALRNKLYEEEPVKEPSIPENLRDLLEE

Sequences:

>Translated_295_residues
MGVRSMSTFISTHDVRIHIDPAVSLAPRRYGLPPHPREVDRLIMAGREIEEAAYKADVIIITHYHYDHHDPGFLISLDIY
RDKIIYVKDPVNNINVSQRIRASRFLKQVKELAREVHVAEGSMVRFGDTVVKMSQAVPHGPSTRLGYVVEVSIRHGDKVF
LYTSDVEGPCLEEHMGFILEEKPGIIVVDGALSYMLGYRYSVKSLEASIDNLKKIIDVGVKTVIVDHHLLRDLKYRERMA
EVIEYGSKHDVRVITAAEYMGRPIEQLEALRNKLYEEEPVKEPSIPENLRDLLEE
>Mature_294_residues
GVRSMSTFISTHDVRIHIDPAVSLAPRRYGLPPHPREVDRLIMAGREIEEAAYKADVIIITHYHYDHHDPGFLISLDIYR
DKIIYVKDPVNNINVSQRIRASRFLKQVKELAREVHVAEGSMVRFGDTVVKMSQAVPHGPSTRLGYVVEVSIRHGDKVFL
YTSDVEGPCLEEHMGFILEEKPGIIVVDGALSYMLGYRYSVKSLEASIDNLKKIIDVGVKTVIVDHHLLRDLKYRERMAE
VIEYGSKHDVRVITAAEYMGRPIEQLEALRNKLYEEEPVKEPSIPENLRDLLEE

Specific function: Unknown

COG id: COG2248

COG function: function code R; Predicted hydrolase (metallo-beta-lactamase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0282 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR014426 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33737; Mature: 33606

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVRSMSTFISTHDVRIHIDPAVSLAPRRYGLPPHPREVDRLIMAGREIEEAAYKADVII
CCCCHHHHHHEECEEEEEECCCCEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCEEE
ITHYHYDHHDPGFLISLDIYRDKIIYVKDPVNNINVSQRIRASRFLKQVKELAREVHVAE
EEEEECCCCCCCEEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GSMVRFGDTVVKMSQAVPHGPSTRLGYVVEVSIRHGDKVFLYTSDVEGPCLEEHMGFILE
CCEEEHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCCHHHHHCCEEEE
EKPGIIVVDGALSYMLGYRYSVKSLEASIDNLKKIIDVGVKTVIVDHHLLRDLKYRERMA
CCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
EVIEYGSKHDVRVITAAEYMGRPIEQLEALRNKLYEEEPVKEPSIPENLRDLLEE
HHHHCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
GVRSMSTFISTHDVRIHIDPAVSLAPRRYGLPPHPREVDRLIMAGREIEEAAYKADVII
CCCHHHHHHEECEEEEEECCCCEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCEEE
ITHYHYDHHDPGFLISLDIYRDKIIYVKDPVNNINVSQRIRASRFLKQVKELAREVHVAE
EEEEECCCCCCCEEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GSMVRFGDTVVKMSQAVPHGPSTRLGYVVEVSIRHGDKVFLYTSDVEGPCLEEHMGFILE
CCEEEHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCCHHHHHCCEEEE
EKPGIIVVDGALSYMLGYRYSVKSLEASIDNLKKIIDVGVKTVIVDHHLLRDLKYRERMA
CCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
EVIEYGSKHDVRVITAAEYMGRPIEQLEALRNKLYEEEPVKEPSIPENLRDLLEE
HHHHCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA