Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883745

Identifier: 218883745

GI number: 218883745

Start: 403401

End: 404342

Strand: Reverse

Name: 218883745

Synonym: DKAM_0434

Alternate gene names: NA

Gene position: 404342-403401 (Counterclockwise)

Preceding gene: 218883746

Following gene: 218883739

Centisome position: 29.62

GC content: 41.83

Gene sequence:

>942_bases
TTGCTCACATCAAAAATAACACGCACTAGGGATCTATCAGGGGTATCAGGCTTGAATGAGGTCCCCATGTTAATGTTGTT
AATAGGTATAGGTATTCTTGTACAGGTGGTTTTCAAACGGATCCTGGGATTAGACGAGCTCTTCGAGAGAATATTGAAAA
AGCTTGTTGATTTCATCTACTATTTACTAATACCCCTGGCATTCACAAAGACCTATACCGAGAGAGGTGTCATGGTGAAT
GATTTATGGTTGATGGCTTCATTCATAATATTTCTAGTTATCTCCATGACATCCCTAAGACTTATCGTTAGGCACGGAAG
TAAAGACTATTATAATGCATTATTTATCACATCTATATTTCCCAACGCAGTCTTCCTCGGTTTCCCGGTTTCACTTGCAT
TATTTGGTTCCATACATGTTGCATCCATATATGGTCTTGCAACACTAGTCCTTAATGTCGTGGCACCGGACATCATCGCA
CTGGGTAAAGCCTCGCTGATAAGGCTCATTGAAATGCCGGCGCTGCTAGGCTTTATCATAGGGTTGATTGGACACTACCT
GTTCCCTCCGGGATTAGCTGAGATCATCATTAACACATTGTGGTGGGCACCCTACGCATTAAGTTATACAGCTACGATGA
TCCTGGGAGCTAGGCTGCCGCTAAGAGTGGATGTACTGCGGGGAAATATTAAGTTCATAGCGCTCGCCTCTATATATAGG
TTCATGATTGCACCATTAGTCACATATATAGTATTGTTTATACCTGGAGTGGATTGGAGTATTGTTACACAGGCCATTGT
TGTCTCAATGATGCCTCCCGCCGTGTTAAATACCCTGATTGCAAGCAAGTATGGATGGATGCCTGAATTAGTTGCATCCA
CCACATTTATTCTGACATTAATAGTGGTTCTATGCCTCCTCTTTACCAACTTATTGTTTTAA

Upstream 100 bases:

>100_bases
AGAAGGAAAAGTATTTGCCAGGTTCTCCGAGCCACTAGTATTCTTTGGTGGTGATGAATATATCGTTGAATACCTTGGGG
GCAACCAACATTAATATTGT

Downstream 100 bases:

>100_bases
TTATCCAGAACTGAGAAGGGCCCTCCGTTATTTGCTTTTTAGACACCATTTCCAGCCTATGGTCTTTCTAGGTCTCCATG
GGCTGGTTCACCACGGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MLTSKITRTRDLSGVSGLNEVPMLMLLIGIGILVQVVFKRILGLDELFERILKKLVDFIYYLLIPLAFTKTYTERGVMVN
DLWLMASFIIFLVISMTSLRLIVRHGSKDYYNALFITSIFPNAVFLGFPVSLALFGSIHVASIYGLATLVLNVVAPDIIA
LGKASLIRLIEMPALLGFIIGLIGHYLFPPGLAEIIINTLWWAPYALSYTATMILGARLPLRVDVLRGNIKFIALASIYR
FMIAPLVTYIVLFIPGVDWSIVTQAIVVSMMPPAVLNTLIASKYGWMPELVASTTFILTLIVVLCLLFTNLLF

Sequences:

>Translated_313_residues
MLTSKITRTRDLSGVSGLNEVPMLMLLIGIGILVQVVFKRILGLDELFERILKKLVDFIYYLLIPLAFTKTYTERGVMVN
DLWLMASFIIFLVISMTSLRLIVRHGSKDYYNALFITSIFPNAVFLGFPVSLALFGSIHVASIYGLATLVLNVVAPDIIA
LGKASLIRLIEMPALLGFIIGLIGHYLFPPGLAEIIINTLWWAPYALSYTATMILGARLPLRVDVLRGNIKFIALASIYR
FMIAPLVTYIVLFIPGVDWSIVTQAIVVSMMPPAVLNTLIASKYGWMPELVASTTFILTLIVVLCLLFTNLLF
>Mature_313_residues
MLTSKITRTRDLSGVSGLNEVPMLMLLIGIGILVQVVFKRILGLDELFERILKKLVDFIYYLLIPLAFTKTYTERGVMVN
DLWLMASFIIFLVISMTSLRLIVRHGSKDYYNALFITSIFPNAVFLGFPVSLALFGSIHVASIYGLATLVLNVVAPDIIA
LGKASLIRLIEMPALLGFIIGLIGHYLFPPGLAEIIINTLWWAPYALSYTATMILGARLPLRVDVLRGNIKFIALASIYR
FMIAPLVTYIVLFIPGVDWSIVTQAIVVSMMPPAVLNTLIASKYGWMPELVASTTFILTLIVVLCLLFTNLLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34779; Mature: 34779

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTSKITRTRDLSGVSGLNEVPMLMLLIGIGILVQVVFKRILGLDELFERILKKLVDFIY
CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
YLLIPLAFTKTYTERGVMVNDLWLMASFIIFLVISMTSLRLIVRHGSKDYYNALFITSIF
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
PNAVFLGFPVSLALFGSIHVASIYGLATLVLNVVAPDIIALGKASLIRLIEMPALLGFII
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLIGHYLFPPGLAEIIINTLWWAPYALSYTATMILGARLPLRVDVLRGNIKFIALASIYR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHH
FMIAPLVTYIVLFIPGVDWSIVTQAIVVSMMPPAVLNTLIASKYGWMPELVASTTFILTL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IVVLCLLFTNLLF
HHHHHHHHHHHCC
>Mature Secondary Structure
MLTSKITRTRDLSGVSGLNEVPMLMLLIGIGILVQVVFKRILGLDELFERILKKLVDFIY
CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
YLLIPLAFTKTYTERGVMVNDLWLMASFIIFLVISMTSLRLIVRHGSKDYYNALFITSIF
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
PNAVFLGFPVSLALFGSIHVASIYGLATLVLNVVAPDIIALGKASLIRLIEMPALLGFII
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLIGHYLFPPGLAEIIINTLWWAPYALSYTATMILGARLPLRVDVLRGNIKFIALASIYR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHH
FMIAPLVTYIVLFIPGVDWSIVTQAIVVSMMPPAVLNTLIASKYGWMPELVASTTFILTL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IVVLCLLFTNLLF
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA