Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883746

Identifier: 218883746

GI number: 218883746

Start: 404349

End: 405113

Strand: Reverse

Name: 218883746

Synonym: DKAM_0435

Alternate gene names: NA

Gene position: 405113-404349 (Counterclockwise)

Preceding gene: 218883752

Following gene: 218883745

Centisome position: 29.67

GC content: 43.79

Gene sequence:

>765_bases
ATGCTTCTAAAGGTGTACCCTGTGTCATTGGTCACAATAAGGCTGGCTAAGCCAGGCTTACTCAACGGTGTCAAGACACG
ATTTTACATCTGGGATAATGGTAATCCACCCAAGGGGCTTAACGGACTACATCCCTTAGCTGAGGTGATCAGCCCACGTA
TAGATTTCATGTGGTTTGAGAAGCCGCATGAGAAAATCACCTCAGAAAAATTCATCGCCGAATTCAAAGGTTTTATTAAG
ATAGATGTACCCGGAGTATACAGGTTCTACGTGGTTTCAGACAACGGTGTTATATTCTCCGTTGGCGATAAAACACTTAT
TGATACATGGTCCAGCCAGGAGTCTCGGATACATAGTAGTCCCGAGATAAGGTTGAATAAGGGTTTCAAAAGGATAATAC
TGCTCTACTATAACAGGGCTAGACACAGCGAGGTAAGGCTTGGATGGGTGAAACCAGGGGGTAGAGTAGAGGTAATCCCG
GATGATAGATACTATTTCTCGATCGGTGAGCATGTATTCATTACTGGGTTACCCGACGGCTATGTGGTGAGGATGCTGCC
ATTAAAGGATGCATCATCAGAGAAGACATGTGTCTCCTTAATGAATATATGCATGGTGGAGGTACCGTGGAAAGAACAAC
CGCTTGAAGCCTATGTAAGCATATATAATAGAGAAGGAAAAGTATTTGCCAGGTTCTCCGAGCCACTAGTATTCTTTGGT
GGTGATGAATATATCGTTGAATACCTTGGGGGCAACCAACATTAA

Upstream 100 bases:

>100_bases
GTTTCGGGTTAACTAAAACCATCACTTATCCCTTTACCGTGTTTCCATGTAAATAGTAAATAAACCCTTAATAAATTACT
TACATAGATATTTACATGAT

Downstream 100 bases:

>100_bases
TATTGTTTGCTCACATCAAAAATAACACGCACTAGGGATCTATCAGGGGTATCAGGCTTGAATGAGGTCCCCATGTTAAT
GTTGTTAATAGGTATAGGTA

Product: PA14 domain-containing protein

Products: NA

Alternate protein names: PA14 Domain Protein

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MLLKVYPVSLVTIRLAKPGLLNGVKTRFYIWDNGNPPKGLNGLHPLAEVISPRIDFMWFEKPHEKITSEKFIAEFKGFIK
IDVPGVYRFYVVSDNGVIFSVGDKTLIDTWSSQESRIHSSPEIRLNKGFKRIILLYYNRARHSEVRLGWVKPGGRVEVIP
DDRYYFSIGEHVFITGLPDGYVVRMLPLKDASSEKTCVSLMNICMVEVPWKEQPLEAYVSIYNREGKVFARFSEPLVFFG
GDEYIVEYLGGNQH

Sequences:

>Translated_254_residues
MLLKVYPVSLVTIRLAKPGLLNGVKTRFYIWDNGNPPKGLNGLHPLAEVISPRIDFMWFEKPHEKITSEKFIAEFKGFIK
IDVPGVYRFYVVSDNGVIFSVGDKTLIDTWSSQESRIHSSPEIRLNKGFKRIILLYYNRARHSEVRLGWVKPGGRVEVIP
DDRYYFSIGEHVFITGLPDGYVVRMLPLKDASSEKTCVSLMNICMVEVPWKEQPLEAYVSIYNREGKVFARFSEPLVFFG
GDEYIVEYLGGNQH
>Mature_254_residues
MLLKVYPVSLVTIRLAKPGLLNGVKTRFYIWDNGNPPKGLNGLHPLAEVISPRIDFMWFEKPHEKITSEKFIAEFKGFIK
IDVPGVYRFYVVSDNGVIFSVGDKTLIDTWSSQESRIHSSPEIRLNKGFKRIILLYYNRARHSEVRLGWVKPGGRVEVIP
DDRYYFSIGEHVFITGLPDGYVVRMLPLKDASSEKTCVSLMNICMVEVPWKEQPLEAYVSIYNREGKVFARFSEPLVFFG
GDEYIVEYLGGNQH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29156; Mature: 29156

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKVYPVSLVTIRLAKPGLLNGVKTRFYIWDNGNPPKGLNGLHPLAEVISPRIDFMWFE
CEEEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHCCCEEEEEEC
KPHEKITSEKFIAEFKGFIKIDVPGVYRFYVVSDNGVIFSVGDKTLIDTWSSQESRIHSS
CHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCEEEEECCCEEEECCCCCCHHCCCC
PEIRLNKGFKRIILLYYNRARHSEVRLGWVKPGGRVEVIPDDRYYFSIGEHVFITGLPDG
CCEEECCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCEEEEECCEEEEEECCCC
YVVRMLPLKDASSEKTCVSLMNICMVEVPWKEQPLEAYVSIYNREGKVFARFSEPLVFFG
EEEEEEECCCCCCCHHHHHHHHHHEEECCCCCCCHHHHHEEECCCCCEEEEECCCEEEEC
GDEYIVEYLGGNQH
CCCEEEEECCCCCC
>Mature Secondary Structure
MLLKVYPVSLVTIRLAKPGLLNGVKTRFYIWDNGNPPKGLNGLHPLAEVISPRIDFMWFE
CEEEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHCCCEEEEEEC
KPHEKITSEKFIAEFKGFIKIDVPGVYRFYVVSDNGVIFSVGDKTLIDTWSSQESRIHSS
CHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCEEEEECCCEEEECCCCCCHHCCCC
PEIRLNKGFKRIILLYYNRARHSEVRLGWVKPGGRVEVIPDDRYYFSIGEHVFITGLPDG
CCEEECCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCEEEEECCEEEEEECCCC
YVVRMLPLKDASSEKTCVSLMNICMVEVPWKEQPLEAYVSIYNREGKVFARFSEPLVFFG
EEEEEEECCCCCCCHHHHHHHHHHEEECCCCCCCHHHHHEEECCCCCEEEEECCCEEEEC
GDEYIVEYLGGNQH
CCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA