| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883736
Identifier: 218883736
GI number: 218883736
Start: 397332
End: 397721
Strand: Reverse
Name: 218883736
Synonym: DKAM_0425
Alternate gene names: NA
Gene position: 397721-397332 (Counterclockwise)
Preceding gene: 218883737
Following gene: 218883735
Centisome position: 29.13
GC content: 44.62
Gene sequence:
>390_bases TTGACTAGCGATCCAGCTGCAAAGTATTTCTCAGGTAAAACCACGTCGAGGGATAGAGCAGTATTCGAGGCAGGCATCGC TATAGGGATGATCATACACCAGTTCACAGGTATACCTGTAAAGAGGCTGGAGGATATAGAGTTAATAGGGAAAGTCATCG AGAACGCTGTAAAAGCACAGCCTTTCAAGGAGGATGCTAAGATAGAGATAAGGATAGGGGATCTAAGCAGTAGCCCTGGG AACCCATATAGCTACACCACCCTGAAGACGAGGCATATAGATGCCAGGATAGTGGTTAGATACAACAATGTAAGAGTTGT AGCCAGGCTTAGATACATTCCCGAACTAGACTTTAACCTGGCGTATATAGAGGATATTGAAGAGCTTTGA
Upstream 100 bases:
>100_bases TTTAATAAGAGGTTGAAAAAAGCGAAGCTTGAAGTAGCCTCATACATGCTCAAGTACTTAACGGGTAAAGGAGTTTCCTT TAAATATATTGGGGAGGGAG
Downstream 100 bases:
>100_bases GGATGCTGCTTCATGCCGGAGAAGAATGTTGCATGGGGCATAACAGGTGCCGGTGCCTTCTTGAAGGAGAGCATTAATGC TATTTCGAAGATCATGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MTSDPAAKYFSGKTTSRDRAVFEAGIAIGMIIHQFTGIPVKRLEDIELIGKVIENAVKAQPFKEDAKIEIRIGDLSSSPG NPYSYTTLKTRHIDARIVVRYNNVRVVARLRYIPELDFNLAYIEDIEEL
Sequences:
>Translated_129_residues MTSDPAAKYFSGKTTSRDRAVFEAGIAIGMIIHQFTGIPVKRLEDIELIGKVIENAVKAQPFKEDAKIEIRIGDLSSSPG NPYSYTTLKTRHIDARIVVRYNNVRVVARLRYIPELDFNLAYIEDIEEL >Mature_128_residues TSDPAAKYFSGKTTSRDRAVFEAGIAIGMIIHQFTGIPVKRLEDIELIGKVIENAVKAQPFKEDAKIEIRIGDLSSSPGN PYSYTTLKTRHIDARIVVRYNNVRVVARLRYIPELDFNLAYIEDIEEL
Specific function: Unknown
COG id: COG2098
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007179 - InterPro: IPR007181 - ProDom: PD027636 [H]
Pfam domain/function: PF04036 DUF372; PF04038 DUF381 [H]
EC number: NA
Molecular weight: Translated: 14585; Mature: 14454
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDPAAKYFSGKTTSRDRAVFEAGIAIGMIIHQFTGIPVKRLEDIELIGKVIENAVKAQ CCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC PFKEDAKIEIRIGDLSSSPGNPYSYTTLKTRHIDARIVVRYNNVRVVARLRYIPELDFNL CCCCCCEEEEEEECCCCCCCCCEEEEEEEEEECCEEEEEEECCEEEEEEEECCCCCCCCC AYIEDIEEL HHHHHHHCC >Mature Secondary Structure TSDPAAKYFSGKTTSRDRAVFEAGIAIGMIIHQFTGIPVKRLEDIELIGKVIENAVKAQ CCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC PFKEDAKIEIRIGDLSSSPGNPYSYTTLKTRHIDARIVVRYNNVRVVARLRYIPELDFNL CCCCCCEEEEEEECCCCCCCCCEEEEEEEEEECCEEEEEEECCEEEEEEEECCCCCCCCC AYIEDIEEL HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]