| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883737
Identifier: 218883737
GI number: 218883737
Start: 397714
End: 398445
Strand: Reverse
Name: 218883737
Synonym: DKAM_0426
Alternate gene names: NA
Gene position: 398445-397714 (Counterclockwise)
Preceding gene: 218883738
Following gene: 218883736
Centisome position: 29.19
GC content: 43.99
Gene sequence:
>732_bases TTGAGCTGGGTAATAGATCCCTCTGAGTGGAAACCGTTGTATAATTACATAAAGTCCAGGCTGAACCTTTCATTTGATAG GGATCAGGAATCCACTGATTTATTAAGTAGGCTTCTAGAAAACCGTGATAATATAATCGAGTACGATGAGTTGAAGGAAG CCTATGAAGGTAGAAATCGTGCACTTATTTTCGGATGTAGTCATAGCCTTGCGAGAGACCTGAGGAAGGCTGTTGAAACC AACGTACTTAGAGATGCCCTGCTTATAGCTGCTGATGGATCAACCTCTCTCCTTCTATCACATGGTATCTACCCGGATAT TGTTGTCACTGATCTAGATGGATACATATATGACCTAGCCAGGGCATCGCATCAAGGCTCTATAACCGTGATACATGCCC ACGGAGATAATATGCATAGGATAAACAGGTTTATCGGGGAGTTCAAGGGCCCGTTAATCGGCTCTACACAGGTGGAGCCG CGGCCACACGTGTACAACTTCGGGGGATTTACCGATGGTGATAGAGCAGCCTTCATAGCTTACGCTATAGGTATTAGAGA GATATATCTAGCAGGCTTCAACCTCTATGGAGAGCCCTCTATATGTCCAGGTAAAATCGTCCCGTTTAATAAGAGGTTGA AAAAAGCGAAGCTTGAAGTAGCCTCATACATGCTCAAGTACTTAACGGGTAAAGGAGTTTCCTTTAAATATATTGGGGAG GGAGTTGACTAG
Upstream 100 bases:
>100_bases GAAACCATACACGAGTACATTGTTGAATCAATAGTTAGAACCAGGTTAACCGATATCGCTGGCTTTAAGATAATTAATAA GACTTAAATAGGGTGGTTAA
Downstream 100 bases:
>100_bases CGATCCAGCTGCAAAGTATTTCTCAGGTAAAACCACGTCGAGGGATAGAGCAGTATTCGAGGCAGGCATCGCTATAGGGA TGATCATACACCAGTTCACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSWVIDPSEWKPLYNYIKSRLNLSFDRDQESTDLLSRLLENRDNIIEYDELKEAYEGRNRALIFGCSHSLARDLRKAVET NVLRDALLIAADGSTSLLLSHGIYPDIVVTDLDGYIYDLARASHQGSITVIHAHGDNMHRINRFIGEFKGPLIGSTQVEP RPHVYNFGGFTDGDRAAFIAYAIGIREIYLAGFNLYGEPSICPGKIVPFNKRLKKAKLEVASYMLKYLTGKGVSFKYIGE GVD
Sequences:
>Translated_243_residues MSWVIDPSEWKPLYNYIKSRLNLSFDRDQESTDLLSRLLENRDNIIEYDELKEAYEGRNRALIFGCSHSLARDLRKAVET NVLRDALLIAADGSTSLLLSHGIYPDIVVTDLDGYIYDLARASHQGSITVIHAHGDNMHRINRFIGEFKGPLIGSTQVEP RPHVYNFGGFTDGDRAAFIAYAIGIREIYLAGFNLYGEPSICPGKIVPFNKRLKKAKLEVASYMLKYLTGKGVSFKYIGE GVD >Mature_242_residues SWVIDPSEWKPLYNYIKSRLNLSFDRDQESTDLLSRLLENRDNIIEYDELKEAYEGRNRALIFGCSHSLARDLRKAVETN VLRDALLIAADGSTSLLLSHGIYPDIVVTDLDGYIYDLARASHQGSITVIHAHGDNMHRINRFIGEFKGPLIGSTQVEPR PHVYNFGGFTDGDRAAFIAYAIGIREIYLAGFNLYGEPSICPGKIVPFNKRLKKAKLEVASYMLKYLTGKGVSFKYIGEG VD
Specific function: Unknown
COG id: COG1634
COG function: function code R; Uncharacterized Rossmann fold enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.thermoautotrophicum MTH1600 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002826 - InterPro: IPR007371 [H]
Pfam domain/function: PF01973 DUF115 [H]
EC number: NA
Molecular weight: Translated: 27353; Mature: 27222
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWVIDPSEWKPLYNYIKSRLNLSFDRDQESTDLLSRLLENRDNIIEYDELKEAYEGRNR CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC ALIFGCSHSLARDLRKAVETNVLRDALLIAADGSTSLLLSHGIYPDIVVTDLDGYIYDLA EEEEECCHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCEEEECCCHHHHHHH RASHQGSITVIHAHGDNMHRINRFIGEFKGPLIGSTQVEPRPHVYNFGGFTDGDRAAFIA HCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHH YAIGIREIYLAGFNLYGEPSICPGKIVPFNKRLKKAKLEVASYMLKYLTGKGVSFKYIGE HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC GVD CCC >Mature Secondary Structure SWVIDPSEWKPLYNYIKSRLNLSFDRDQESTDLLSRLLENRDNIIEYDELKEAYEGRNR CCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC ALIFGCSHSLARDLRKAVETNVLRDALLIAADGSTSLLLSHGIYPDIVVTDLDGYIYDLA EEEEECCHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCEEEECCCHHHHHHH RASHQGSITVIHAHGDNMHRINRFIGEFKGPLIGSTQVEPRPHVYNFGGFTDGDRAAFIA HCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHH YAIGIREIYLAGFNLYGEPSICPGKIVPFNKRLKKAKLEVASYMLKYLTGKGVSFKYIGE HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC GVD CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]