| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883550
Identifier: 218883550
GI number: 218883550
Start: 222301
End: 222786
Strand: Direct
Name: 218883550
Synonym: DKAM_0239
Alternate gene names: NA
Gene position: 222301-222786 (Clockwise)
Preceding gene: 218883549
Following gene: 218883551
Centisome position: 16.28
GC content: 42.8
Gene sequence:
>486_bases ATGAGGATTAGTCCCGTGTTCATAACGAGGTCGTTAATTATAGCGTCCGTCTATACTGCTGTAACCCTGATGCTTGGATA CATATCGTATGGTGAACTACAGTTTAGGGTGAGCGATGCAATGATAATATTGCCGTTGATAGTTGGCTTGGGTTTAGACG CGGTTGTTGGCTTAACCATAGGTGGGTTGCTTGGAAATTTAGCGAGTCCATTCATACCATGGGACTGGGTCTTTGGACCA CTGGCTAATCTAGTCGCTTCAACTATTGTTTACCTAGTTGGGAGAACCAGGCTGAACACTTATGTAAAGCTTGCTGTATC CTCGATACTTGCCTCTCTAGCTATTGCTGTGATAGTGGGATACGAGTTAACAGTGATATATGGGCTTCCAGAGCTAACTA TACTCTATATTTTCATAAGCGAGCTAGTCATTATAGGCGTCATAGGTGGATTAGTATATAGGTCTCTCAGGGTGTTTTTT AAGTGA
Upstream 100 bases:
>100_bases GGGGAGGTTCTTATCCTTGTTGCACCAGGGATAGAATCATGGTTTAAAAAGCAGTGGTTAGTTATTTATATAATCCTTGA AAATCCGGTACGGTGATTTC
Downstream 100 bases:
>100_bases ACGAGGTGAGAGGTGTAGATTTATCAATAGGTTATTCGCCGGGTAAACCGTTAATAGAGGATGCAGAGTTCACTCTAGGC CCTGGGCTCCACGTATTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MRISPVFITRSLIIASVYTAVTLMLGYISYGELQFRVSDAMIILPLIVGLGLDAVVGLTIGGLLGNLASPFIPWDWVFGP LANLVASTIVYLVGRTRLNTYVKLAVSSILASLAIAVIVGYELTVIYGLPELTILYIFISELVIIGVIGGLVYRSLRVFF K
Sequences:
>Translated_161_residues MRISPVFITRSLIIASVYTAVTLMLGYISYGELQFRVSDAMIILPLIVGLGLDAVVGLTIGGLLGNLASPFIPWDWVFGP LANLVASTIVYLVGRTRLNTYVKLAVSSILASLAIAVIVGYELTVIYGLPELTILYIFISELVIIGVIGGLVYRSLRVFF K >Mature_161_residues MRISPVFITRSLIIASVYTAVTLMLGYISYGELQFRVSDAMIILPLIVGLGLDAVVGLTIGGLLGNLASPFIPWDWVFGP LANLVASTIVYLVGRTRLNTYVKLAVSSILASLAIAVIVGYELTVIYGLPELTILYIFISELVIIGVIGGLVYRSLRVFF K
Specific function: Unknown
COG id: COG4708
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17441; Mature: 17441
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRISPVFITRSLIIASVYTAVTLMLGYISYGELQFRVSDAMIILPLIVGLGLDAVVGLTI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCHHHHHHHHH GGLLGNLASPFIPWDWVFGPLANLVASTIVYLVGRTRLNTYVKLAVSSILASLAIAVIVG HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YELTVIYGLPELTILYIFISELVIIGVIGGLVYRSLRVFFK HHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRISPVFITRSLIIASVYTAVTLMLGYISYGELQFRVSDAMIILPLIVGLGLDAVVGLTI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCHHHHHHHHH GGLLGNLASPFIPWDWVFGPLANLVASTIVYLVGRTRLNTYVKLAVSSILASLAIAVIVG HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YELTVIYGLPELTILYIFISELVIIGVIGGLVYRSLRVFFK HHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA