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The map label for this gene is 218883535

Identifier: 218883535

GI number: 218883535

Start: 207897

End: 208445

Strand: Direct

Name: 218883535

Synonym: DKAM_0224

Alternate gene names: NA

Gene position: 207897-208445 (Clockwise)

Preceding gene: 218883534

Following gene: 218883537

Centisome position: 15.23

GC content: 44.63

Gene sequence:

>549_bases
ATGTACTTGGATATAAATAAGCCGGTGAAATTCAACGAGTACACTGGTAAGTGCCCTGTTTGCGGAGGCTTAATGGTTTA
CGTAGACTATGTTTACAGGATACCCTACTATGAATCCGTGTTGATAACCACTGGTGAGTGCTCCTCATGTGGCTATAAGT
ACAGGGATGTAAGGTTGACAGATCAAAAGGAGCCTAGGAGAATAATATACAGGGTTGAGAAGCCCGGTGATGAAAGGGCA
TTGGTGATCAGGTCGTCGGGCAGCATCCTCTTAATACCAGAGCTTGGATTAAGTATTGAACCAGGTCCATTCTCCCAGGG
ATTCATAACAACTGTGGAGGGACTAATCATGGATTTCGCTGAGAAAACAAGGTTCCTCTGTGAGGAAGATAAGGAGAAGA
AGGCTGAATGTGATATCGTGATGGAGAAGTTGGCTAAGGCCAGGGATGGGCTGATCAGCTATACTGTTATTATAGAGGAT
AAAACCGGGTTAAGCGATATAGTGAGTGGGAAAACGATCTATGAAAAGCTTCAACCCGCAACAGGCTAG

Upstream 100 bases:

>100_bases
TTGCAACATGTAGGGAGGGATTTCCAGAGTTCTTCATCAAGGCTTCGTCTTGTGATGGATCTGGATTAATAGTGTATCAT
CCATTAAATAAACTAGGGTG

Downstream 100 bases:

>100_bases
ATTATGAACCGACCGTTTTCATAGATTAACTCGTTATCCACGTAGACCTTCGCGTTCCTCATGTCCTTAATCATATCCCA
GTGTATTGCTGAAACATTCC

Product: ZPR1-related zinc finger protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MYLDINKPVKFNEYTGKCPVCGGLMVYVDYVYRIPYYESVLITTGECSSCGYKYRDVRLTDQKEPRRIIYRVEKPGDERA
LVIRSSGSILLIPELGLSIEPGPFSQGFITTVEGLIMDFAEKTRFLCEEDKEKKAECDIVMEKLAKARDGLISYTVIIED
KTGLSDIVSGKTIYEKLQPATG

Sequences:

>Translated_182_residues
MYLDINKPVKFNEYTGKCPVCGGLMVYVDYVYRIPYYESVLITTGECSSCGYKYRDVRLTDQKEPRRIIYRVEKPGDERA
LVIRSSGSILLIPELGLSIEPGPFSQGFITTVEGLIMDFAEKTRFLCEEDKEKKAECDIVMEKLAKARDGLISYTVIIED
KTGLSDIVSGKTIYEKLQPATG
>Mature_182_residues
MYLDINKPVKFNEYTGKCPVCGGLMVYVDYVYRIPYYESVLITTGECSSCGYKYRDVRLTDQKEPRRIIYRVEKPGDERA
LVIRSSGSILLIPELGLSIEPGPFSQGFITTVEGLIMDFAEKTRFLCEEDKEKKAECDIVMEKLAKARDGLISYTVIIED
KTGLSDIVSGKTIYEKLQPATG

Specific function: Unknown

COG id: COG1779

COG function: function code R; C4-type Zn-finger protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ZPR1 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17565020, Length=155, Percent_Identity=30.3225806451613, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004457
- InterPro:   IPR004470 [H]

Pfam domain/function: PF03367 zf-ZPR1 [H]

EC number: NA

Molecular weight: Translated: 20550; Mature: 20550

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLDINKPVKFNEYTGKCPVCGGLMVYVDYVYRIPYYESVLITTGECSSCGYKYRDVRLT
CEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEEC
DQKEPRRIIYRVEKPGDERALVIRSSGSILLIPELGLSIEPGPFSQGFITTVEGLIMDFA
CCCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCCCEECCCCCCCCHHHHHHHHHHHHH
EKTRFLCEEDKEKKAECDIVMEKLAKARDGLISYTVIIEDKTGLSDIVSGKTIYEKLQPA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCHHHHHCCHHHHHHCCCC
TG
CC
>Mature Secondary Structure
MYLDINKPVKFNEYTGKCPVCGGLMVYVDYVYRIPYYESVLITTGECSSCGYKYRDVRLT
CEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEEC
DQKEPRRIIYRVEKPGDERALVIRSSGSILLIPELGLSIEPGPFSQGFITTVEGLIMDFA
CCCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCCCEECCCCCCCCHHHHHHHHHHHHH
EKTRFLCEEDKEKKAECDIVMEKLAKARDGLISYTVIIEDKTGLSDIVSGKTIYEKLQPA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCHHHHHCCHHHHHHCCCC
TG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]