| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883530
Identifier: 218883530
GI number: 218883530
Start: 203914
End: 204822
Strand: Direct
Name: 218883530
Synonym: DKAM_0219
Alternate gene names: NA
Gene position: 203914-204822 (Clockwise)
Preceding gene: 218883521
Following gene: 218883534
Centisome position: 14.94
GC content: 43.45
Gene sequence:
>909_bases ATGAAGCCGCAGACGGAGTGTTTAAGGTGTATTTTGACAACGAGGCTTAGAGAGATAGAGTATTCATCGTTAAGTCCAGG AGAGAAGATAGTACTAGCTAAGAGGATAATGAGCAAACTAGTGAACGACTTCTCCCTTGATTCAACTGAGCTAACAAGGC TTGCATCGGACTTGTTTCAGCTAACGGTAACAGCGCCGGGCGTCCTCGACTACTATAGGTTAGTGAAGACCCAAAGTATG AGAAGGGCTCTCGCGTTGAGAGATGCCCATAGGGAGCATGCAAGATACTTAGACGACTACAGGAGGTTACGTTACCTATT GAAGGTCTCAGCCCTCGGAAACCTTATAGACTATGGTGTCATGGATCATAACTTCAATGAAGAAATAGACCCAGGTATCG CTGAGAACGTGGAGATAGCAATAGATGATAGTGTTAAATTCTATGAACTAGTGAGAAAAGGCGGGCTCAAGATAATGTTC CTGCTGGATAACGCTGGGGAAGCAGTCTACGATTCACTACTCGTAGAGTATCTCCGTGGAAAAGGTAACACTACTATAGG AGTAGTTAAGGATGAGCCAGGCTTTCAAAACGATGTAACACTTAACGATTTCATAGAGATCGGCCTGGACAAGGTGTTCG ATAAGATTGTAACACCAGGTTGCAGAAGCATATGTTCATCCATACACCTCGATAAGGTGAGCGAGGACTTTAAATCACTA TTGAATTCAGTCGACTTAATCATTGCAAAAGGTATGGCGCACTACGAGTACTTAACAGATATTGATATAGGTAAGCCTGT GTTACATATCTTCATACCTAAATGCGACCCCATCTCTAGAAGCCTTGGCTCGGTAACTTACCGTGGTAAACTGGTGGTAT ATTTAAGGTTTCCGGGATCAAAACTGTGA
Upstream 100 bases:
>100_bases AGACAACTATGCTGAGAAATATATATTTTTGTCCAATAATTAATAGTCAAATCAAGATTTATCACGGCATCATACATAGT GAATCAGCAGGGATAACGAC
Downstream 100 bases:
>100_bases TCCTCCTCACATGGGAACCGGAATCCACTAGGTCAAGATATCTCACGGTGTATGTATGAATTATATCTATTATTAGGTCT GGTGGAACCCGTTTCCATAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MKPQTECLRCILTTRLREIEYSSLSPGEKIVLAKRIMSKLVNDFSLDSTELTRLASDLFQLTVTAPGVLDYYRLVKTQSM RRALALRDAHREHARYLDDYRRLRYLLKVSALGNLIDYGVMDHNFNEEIDPGIAENVEIAIDDSVKFYELVRKGGLKIMF LLDNAGEAVYDSLLVEYLRGKGNTTIGVVKDEPGFQNDVTLNDFIEIGLDKVFDKIVTPGCRSICSSIHLDKVSEDFKSL LNSVDLIIAKGMAHYEYLTDIDIGKPVLHIFIPKCDPISRSLGSVTYRGKLVVYLRFPGSKL
Sequences:
>Translated_302_residues MKPQTECLRCILTTRLREIEYSSLSPGEKIVLAKRIMSKLVNDFSLDSTELTRLASDLFQLTVTAPGVLDYYRLVKTQSM RRALALRDAHREHARYLDDYRRLRYLLKVSALGNLIDYGVMDHNFNEEIDPGIAENVEIAIDDSVKFYELVRKGGLKIMF LLDNAGEAVYDSLLVEYLRGKGNTTIGVVKDEPGFQNDVTLNDFIEIGLDKVFDKIVTPGCRSICSSIHLDKVSEDFKSL LNSVDLIIAKGMAHYEYLTDIDIGKPVLHIFIPKCDPISRSLGSVTYRGKLVVYLRFPGSKL >Mature_302_residues MKPQTECLRCILTTRLREIEYSSLSPGEKIVLAKRIMSKLVNDFSLDSTELTRLASDLFQLTVTAPGVLDYYRLVKTQSM RRALALRDAHREHARYLDDYRRLRYLLKVSALGNLIDYGVMDHNFNEEIDPGIAENVEIAIDDSVKFYELVRKGGLKIMF LLDNAGEAVYDSLLVEYLRGKGNTTIGVVKDEPGFQNDVTLNDFIEIGLDKVFDKIVTPGCRSICSSIHLDKVSEDFKSL LNSVDLIIAKGMAHYEYLTDIDIGKPVLHIFIPKCDPISRSLGSVTYRGKLVVYLRFPGSKL
Specific function: Unknown
COG id: COG1578
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002791 - InterPro: IPR014444 [H]
Pfam domain/function: PF01937 DUF89 [H]
EC number: NA
Molecular weight: Translated: 34164; Mature: 34164
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPQTECLRCILTTRLREIEYSSLSPGEKIVLAKRIMSKLVNDFSLDSTELTRLASDLFQ CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LTVTAPGVLDYYRLVKTQSMRRALALRDAHREHARYLDDYRRLRYLLKVSALGNLIDYGV HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MDHNFNEEIDPGIAENVEIAIDDSVKFYELVRKGGLKIMFLLDNAGEAVYDSLLVEYLRG CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHC KGNTTIGVVKDEPGFQNDVTLNDFIEIGLDKVFDKIVTPGCRSICSSIHLDKVSEDFKSL CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LNSVDLIIAKGMAHYEYLTDIDIGKPVLHIFIPKCDPISRSLGSVTYRGKLVVYLRFPGS HHHHHHHHHHCHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCEEECCEEEEEEECCCC KL CC >Mature Secondary Structure MKPQTECLRCILTTRLREIEYSSLSPGEKIVLAKRIMSKLVNDFSLDSTELTRLASDLFQ CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LTVTAPGVLDYYRLVKTQSMRRALALRDAHREHARYLDDYRRLRYLLKVSALGNLIDYGV HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MDHNFNEEIDPGIAENVEIAIDDSVKFYELVRKGGLKIMFLLDNAGEAVYDSLLVEYLRG CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHC KGNTTIGVVKDEPGFQNDVTLNDFIEIGLDKVFDKIVTPGCRSICSSIHLDKVSEDFKSL CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LNSVDLIIAKGMAHYEYLTDIDIGKPVLHIFIPKCDPISRSLGSVTYRGKLVVYLRFPGS HHHHHHHHHHCHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCEEECCEEEEEEECCCC KL CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]