| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883493
Identifier: 218883493
GI number: 218883493
Start: 167455
End: 168333
Strand: Direct
Name: 218883493
Synonym: DKAM_0180
Alternate gene names: NA
Gene position: 167455-168333 (Clockwise)
Preceding gene: 218883484
Following gene: 218883494
Centisome position: 12.27
GC content: 45.73
Gene sequence:
>879_bases ATGTCTATCTCTATTACTGGCTCTAGGGGTGGCTTCTTCAGTAAACTGCTGTGGGCGTTTAAGCCCAAGGATCCATTTGT CAGGAATATTGAGGAATCCATAGTATTAATGGATAGGATGATAAGGAGTATTGAGGCATCTAAGAGAAGCCTTGAGATCA CTCTCGAGGAGCATAAGAGGAAGCTTAAGCTAAGTGGTGTACAAGACAAGGAGCTTCAAGAGATAATAGATGAGGAGAAC AGGAATATAATGGGCTACCTCAACCTCTTCACAAAGGTATACTATGATTTAACAAGGGTTAGGCTCAGGCTTGAGACAAT CACACAGGTCCAGGAACCAATGAAGGTGTTACCGGAGGTACTAGAAGAATTAAAGAGGATCGAGCCCGAAGTAGAGAAGA TCAACCCACAACTGGTAAGCCTGATAAGGATGATTGAGCAGAAGGTTGGAAGCATAAAGGTGTCAACCGATAGCTCATCT ATACCCCAGCCCCTCATAAATAAGTATATGAGTCAGAAAAACGAGGAAAAGACTCCTGTAAAGCCGGTTGAAAATATTGA GGCACTAGTCCCACCAGCTACAGTGGATGAGAGAGCCAGGGCGGCTGTGAAAATACCGCCTCCATCACCCTCGAACAATG GGCAGCAAGCATCGAAACCAGTGGAGGTTGAACCCGAGTTTCAGCGGGGCAGTATAGAGAGCAGGAAAGAGGTACCGTTA AATATTGTTGAGCAATGGGTGCTGGCTGAGCTAAGGAGTAAGGCGGGTATACTCGACATCCAATACTTCACATCGAAGTA TAGGGTTTCACGCGACACGGTTTATGAGGTATTGAGGCGGCTAGAGGAGAAGGGATTAGTGAGGTTAAAGCGCTTCTAA
Upstream 100 bases:
>100_bases CCAATAATGCCGGGTACCCCTAGTGTATTACTATACCCGTTATTTAAAAACCGTTCACAAGGGATATGTTGGTGGAAGCG TGTGATAAAGGGGTTTAGGC
Downstream 100 bases:
>100_bases GCTGGATTAACCCTGGCTACTGGGTGTGATTGCTGTGAGCATGCAGTATCTCGTTGATAAAGGTATAGAGTACGCTCACA AGGCTGTCTCAGCAGATAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MSISITGSRGGFFSKLLWAFKPKDPFVRNIEESIVLMDRMIRSIEASKRSLEITLEEHKRKLKLSGVQDKELQEIIDEEN RNIMGYLNLFTKVYYDLTRVRLRLETITQVQEPMKVLPEVLEELKRIEPEVEKINPQLVSLIRMIEQKVGSIKVSTDSSS IPQPLINKYMSQKNEEKTPVKPVENIEALVPPATVDERARAAVKIPPPSPSNNGQQASKPVEVEPEFQRGSIESRKEVPL NIVEQWVLAELRSKAGILDIQYFTSKYRVSRDTVYEVLRRLEEKGLVRLKRF
Sequences:
>Translated_292_residues MSISITGSRGGFFSKLLWAFKPKDPFVRNIEESIVLMDRMIRSIEASKRSLEITLEEHKRKLKLSGVQDKELQEIIDEEN RNIMGYLNLFTKVYYDLTRVRLRLETITQVQEPMKVLPEVLEELKRIEPEVEKINPQLVSLIRMIEQKVGSIKVSTDSSS IPQPLINKYMSQKNEEKTPVKPVENIEALVPPATVDERARAAVKIPPPSPSNNGQQASKPVEVEPEFQRGSIESRKEVPL NIVEQWVLAELRSKAGILDIQYFTSKYRVSRDTVYEVLRRLEEKGLVRLKRF >Mature_291_residues SISITGSRGGFFSKLLWAFKPKDPFVRNIEESIVLMDRMIRSIEASKRSLEITLEEHKRKLKLSGVQDKELQEIIDEENR NIMGYLNLFTKVYYDLTRVRLRLETITQVQEPMKVLPEVLEELKRIEPEVEKINPQLVSLIRMIEQKVGSIKVSTDSSSI PQPLINKYMSQKNEEKTPVKPVENIEALVPPATVDERARAAVKIPPPSPSNNGQQASKPVEVEPEFQRGSIESRKEVPLN IVEQWVLAELRSKAGILDIQYFTSKYRVSRDTVYEVLRRLEEKGLVRLKRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33700; Mature: 33568
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISITGSRGGFFSKLLWAFKPKDPFVRNIEESIVLMDRMIRSIEASKRSLEITLEEHKR CEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHH KLKLSGVQDKELQEIIDEENRNIMGYLNLFTKVYYDLTRVRLRLETITQVQEPMKVLPEV HHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEELKRIEPEVEKINPQLVSLIRMIEQKVGSIKVSTDSSSIPQPLINKYMSQKNEEKTPV HHHHHHCCCHHHHCCHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHCCCCCCCCC KPVENIEALVPPATVDERARAAVKIPPPSPSNNGQQASKPVEVEPEFQRGSIESRKEVPL CCHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH NIVEQWVLAELRSKAGILDIQYFTSKYRVSRDTVYEVLRRLEEKGLVRLKRF HHHHHHHHHHHHHHCCEEEHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure SISITGSRGGFFSKLLWAFKPKDPFVRNIEESIVLMDRMIRSIEASKRSLEITLEEHKR EEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHH KLKLSGVQDKELQEIIDEENRNIMGYLNLFTKVYYDLTRVRLRLETITQVQEPMKVLPEV HHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEELKRIEPEVEKINPQLVSLIRMIEQKVGSIKVSTDSSSIPQPLINKYMSQKNEEKTPV HHHHHHCCCHHHHCCHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHCCCCCCCCC KPVENIEALVPPATVDERARAAVKIPPPSPSNNGQQASKPVEVEPEFQRGSIESRKEVPL CCHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH NIVEQWVLAELRSKAGILDIQYFTSKYRVSRDTVYEVLRRLEEKGLVRLKRF HHHHHHHHHHHHHHCCEEEHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA