BacMap

Definition	Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession	NC_011766
Length	1,365,223

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The map label for this gene is hflB [C]

Identifier: 218883494

GI number: 218883494

Start: 168359

End: 169531

Strand: Direct

Name: hflB [C]

Synonym: DKAM_0181

Alternate gene names: 218883494

Gene position: 168359-169531 (Clockwise)

Preceding gene: 218883493

Following gene: 218883495

Centisome position: 12.33

GC content: 44.76

Gene sequence:

>1173_bases
GTGATTGCTGTGAGCATGCAGTATCTCGTTGATAAAGGTATAGAGTACGCTCACAAGGCTGTCTCAGCAGATAAGGCAGG
GGACTACGAGACAGCTATAAAATACTATAACTCTGCCATAGACCTCTTATCAAAGTACCTTAAACTATACCCTGACTCCC
CTCTAGCGGAGACGTATAGGGACCTGGTGCAGAAGTATAAGAATAGGGTAGCACTGCTAGAAAAGTATCTATCTAACTCA
GTGAAGATAGGTGGTTCTCAGGGCGAGGAGGGCAGTATAGATGACGTTGTCGAAGTACTGGAGCCTGAGAAGAGGAGTAA
TAAGAACACGTTTAAGGATCTAGTAGACCTGGAGGAAGTAAAACAGGCTTTGAAACGCTCAGTAATATACCCTGTGAAAA
CACCACACCTCTACCCTCTTGGATGGGCCCAGGGAATACTCTTGTTTGGTCCACCTGGATGCGGTAAAACAGAGCTGGCG
ATAGCCCTTGCCAACGAGGTGGACGCTGTCCTTATAAATGTAAGCCCAGCCACAGTTATGAGTAAGTGGCTTGGTGACAC
AGAGAAAAACGTTAAGAAGATATTTGATAAGGCCAGGGAATATGCTTCGCAAGGTAAACCAGTGATCATATTCATTGATG
AAGTAGACAGCTTACTACAGCCCCTGGGAAACGAGGTGGGCGGCGAGAAGAGGATGAGAAACCAGTTCCTGATCGAGATG
GATGGATTAAAGAGCAAGGAGAACAAGAAGATGCCGTTATTCGTAGTGGGTGCAACGAATAAGCCGTGGACCCTTGACAT
AGGCTTCATAAGGAGGTTCGAGAAGAGGATATATGTCCCACCACCAAACAGTGAAGTCAGGAAACAATTATTCATACACT
TCATCGGTAAATTGAAAGACATCTACACAATCGATAACATAGACTATGAGAAGCTAGCGGACTTAACAGAAAACTATAGT
CCAGCAGACATAGCCAGCATAGTTAAAGAAGTACAGAATAATGTGGCAGAGGAATTAAACGAGAAAGGATTATCGAAGCC
TGAGGACATAAAGCAAAGCAGGCCACTAACCACAGAGGACTTCGTAAAGGTAATAGAGAAGAGGAAGCCTAGTATAGATC
CCTCATGGCTGGAAGCATACAAGGAATGGCAAGAGAAATACGGTGCACTCTAA

Upstream 100 bases:

>100_bases
GTTTCACGCGACACGGTTTATGAGGTATTGAGGCGGCTAGAGGAGAAGGGATTAGTGAGGTTAAAGCGCTTCTAAGCTGG
ATTAACCCTGGCTACTGGGT

Downstream 100 bases:

>100_bases
AGAACCGGGTACCCGGTGACCAATTTATAGTTTAACCGGGTACCCGGTATCCCGGTTTTCACACTCTATAATAGACTTCT
GTTTTCACAGCTAGCGATTG

Product: AAA family ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MIAVSMQYLVDKGIEYAHKAVSADKAGDYETAIKYYNSAIDLLSKYLKLYPDSPLAETYRDLVQKYKNRVALLEKYLSNS
VKIGGSQGEEGSIDDVVEVLEPEKRSNKNTFKDLVDLEEVKQALKRSVIYPVKTPHLYPLGWAQGILLFGPPGCGKTELA
IALANEVDAVLINVSPATVMSKWLGDTEKNVKKIFDKAREYASQGKPVIIFIDEVDSLLQPLGNEVGGEKRMRNQFLIEM
DGLKSKENKKMPLFVVGATNKPWTLDIGFIRRFEKRIYVPPPNSEVRKQLFIHFIGKLKDIYTIDNIDYEKLADLTENYS
PADIASIVKEVQNNVAEELNEKGLSKPEDIKQSRPLTTEDFVKVIEKRKPSIDPSWLEAYKEWQEKYGAL

Sequences:

>Translated_390_residues
MIAVSMQYLVDKGIEYAHKAVSADKAGDYETAIKYYNSAIDLLSKYLKLYPDSPLAETYRDLVQKYKNRVALLEKYLSNS
VKIGGSQGEEGSIDDVVEVLEPEKRSNKNTFKDLVDLEEVKQALKRSVIYPVKTPHLYPLGWAQGILLFGPPGCGKTELA
IALANEVDAVLINVSPATVMSKWLGDTEKNVKKIFDKAREYASQGKPVIIFIDEVDSLLQPLGNEVGGEKRMRNQFLIEM
DGLKSKENKKMPLFVVGATNKPWTLDIGFIRRFEKRIYVPPPNSEVRKQLFIHFIGKLKDIYTIDNIDYEKLADLTENYS
PADIASIVKEVQNNVAEELNEKGLSKPEDIKQSRPLTTEDFVKVIEKRKPSIDPSWLEAYKEWQEKYGAL
>Mature_390_residues
MIAVSMQYLVDKGIEYAHKAVSADKAGDYETAIKYYNSAIDLLSKYLKLYPDSPLAETYRDLVQKYKNRVALLEKYLSNS
VKIGGSQGEEGSIDDVVEVLEPEKRSNKNTFKDLVDLEEVKQALKRSVIYPVKTPHLYPLGWAQGILLFGPPGCGKTELA
IALANEVDAVLINVSPATVMSKWLGDTEKNVKKIFDKAREYASQGKPVIIFIDEVDSLLQPLGNEVGGEKRMRNQFLIEM
DGLKSKENKKMPLFVVGATNKPWTLDIGFIRRFEKRIYVPPPNSEVRKQLFIHFIGKLKDIYTIDNIDYEKLADLTENYS
PADIASIVKEVQNNVAEELNEKGLSKPEDIKQSRPLTTEDFVKVIEKRKPSIDPSWLEAYKEWQEKYGAL

Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]

Homologues:

Organism=Homo sapiens, GI7019569, Length=345, Percent_Identity=38.5507246376812, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI17865802, Length=351, Percent_Identity=36.4672364672365, Blast_Score=192, Evalue=4e-49,
Organism=Homo sapiens, GI226371754, Length=291, Percent_Identity=35.3951890034364, Blast_Score=178, Evalue=7e-45,
Organism=Homo sapiens, GI11875211, Length=286, Percent_Identity=38.8111888111888, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI40806170, Length=286, Percent_Identity=38.8111888111888, Blast_Score=173, Evalue=2e-43,
Organism=Homo sapiens, GI14149767, Length=329, Percent_Identity=35.258358662614, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI62177112, Length=329, Percent_Identity=35.258358662614, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI5901990, Length=312, Percent_Identity=34.6153846153846, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI31742536, Length=284, Percent_Identity=32.0422535211268, Blast_Score=161, Evalue=8e-40,
Organism=Homo sapiens, GI112789543, Length=284, Percent_Identity=32.0422535211268, Blast_Score=161, Evalue=8e-40,
Organism=Homo sapiens, GI6005942, Length=229, Percent_Identity=36.6812227074236, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI64084766, Length=283, Percent_Identity=30.7420494699647, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI31377644, Length=276, Percent_Identity=31.5217391304348, Blast_Score=133, Evalue=2e-31,
Organism=Homo sapiens, GI157671927, Length=288, Percent_Identity=31.25, Blast_Score=132, Evalue=4e-31,
Organism=Homo sapiens, GI45643123, Length=287, Percent_Identity=31.0104529616725, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI45643125, Length=233, Percent_Identity=33.9055793991416, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI229577436, Length=301, Percent_Identity=31.5614617940199, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI4505725, Length=223, Percent_Identity=32.2869955156951, Blast_Score=118, Evalue=8e-27,
Organism=Homo sapiens, GI24497435, Length=248, Percent_Identity=33.4677419354839, Blast_Score=115, Evalue=5e-26,
Organism=Homo sapiens, GI24430151, Length=248, Percent_Identity=33.8709677419355, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI300192933, Length=241, Percent_Identity=33.6099585062241, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI4507173, Length=239, Percent_Identity=30.5439330543933, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI195539395, Length=275, Percent_Identity=27.2727272727273, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI194018488, Length=294, Percent_Identity=32.6530612244898, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI5729991, Length=254, Percent_Identity=31.496062992126, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI89064750, Length=254, Percent_Identity=31.496062992126, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI24430155, Length=254, Percent_Identity=31.496062992126, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI4506209, Length=249, Percent_Identity=31.3253012048193, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI7657689, Length=268, Percent_Identity=31.7164179104478, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI21327685, Length=267, Percent_Identity=31.0861423220974, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI24497618, Length=227, Percent_Identity=31.7180616740088, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI310125280, Length=255, Percent_Identity=28.6274509803922, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI156564401, Length=278, Percent_Identity=28.4172661870504, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI21361144, Length=247, Percent_Identity=28.3400809716599, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI310125282, Length=255, Percent_Identity=28.6274509803922, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI153792536, Length=237, Percent_Identity=29.957805907173, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI116292174, Length=281, Percent_Identity=24.5551601423488, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI11321607, Length=174, Percent_Identity=27.0114942528736, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI40806173, Length=175, Percent_Identity=30.2857142857143, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI40255052, Length=280, Percent_Identity=23.2142857142857, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI1789568, Length=233, Percent_Identity=32.1888412017167, Blast_Score=114, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI86561515, Length=343, Percent_Identity=36.734693877551, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17508421, Length=294, Percent_Identity=35.7142857142857, Blast_Score=167, Evalue=9e-42,
Organism=Caenorhabditis elegans, GI32563584, Length=297, Percent_Identity=35.3535353535354, Blast_Score=162, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI25146157, Length=281, Percent_Identity=33.4519572953737, Blast_Score=158, Evalue=5e-39,
Organism=Caenorhabditis elegans, GI17560432, Length=304, Percent_Identity=32.8947368421053, Blast_Score=155, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI17532375, Length=264, Percent_Identity=34.469696969697, Blast_Score=148, Evalue=5e-36,
Organism=Caenorhabditis elegans, GI17531535, Length=231, Percent_Identity=35.9307359307359, Blast_Score=136, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17537217, Length=288, Percent_Identity=30.5555555555556, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17508053, Length=227, Percent_Identity=34.3612334801762, Blast_Score=124, Evalue=8e-29,
Organism=Caenorhabditis elegans, GI25153574, Length=246, Percent_Identity=32.520325203252, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17541226, Length=257, Percent_Identity=31.1284046692607, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17541224, Length=257, Percent_Identity=31.1284046692607, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI193209502, Length=245, Percent_Identity=32.2448979591837, Blast_Score=114, Evalue=8e-26,
Organism=Caenorhabditis elegans, GI25144278, Length=248, Percent_Identity=31.8548387096774, Blast_Score=108, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI25144281, Length=248, Percent_Identity=31.8548387096774, Blast_Score=108, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI17554786, Length=248, Percent_Identity=31.8548387096774, Blast_Score=108, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI71987372, Length=231, Percent_Identity=29.8701298701299, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71987364, Length=239, Percent_Identity=28.8702928870293, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71994521, Length=246, Percent_Identity=32.520325203252, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17505546, Length=237, Percent_Identity=31.2236286919831, Blast_Score=101, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17563250, Length=252, Percent_Identity=30.5555555555556, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17554264, Length=274, Percent_Identity=31.021897810219, Blast_Score=98, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI17562804, Length=237, Percent_Identity=32.4894514767932, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17554784, Length=254, Percent_Identity=29.9212598425197, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI133901662, Length=229, Percent_Identity=29.2576419213974, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI133901658, Length=229, Percent_Identity=29.2576419213974, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17563248, Length=252, Percent_Identity=30.5555555555556, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI115534323, Length=253, Percent_Identity=30.4347826086957, Blast_Score=91, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17508701, Length=247, Percent_Identity=26.7206477732794, Blast_Score=91, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI193206116, Length=221, Percent_Identity=30.316742081448, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI193206114, Length=221, Percent_Identity=30.316742081448, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI133931034, Length=221, Percent_Identity=30.316742081448, Blast_Score=83, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6325431, Length=357, Percent_Identity=35.8543417366947, Blast_Score=192, Evalue=9e-50,
Organism=Saccharomyces cerevisiae, GI6325183, Length=293, Percent_Identity=33.4470989761092, Blast_Score=166, Evalue=9e-42,
Organism=Saccharomyces cerevisiae, GI6320887, Length=300, Percent_Identity=33, Blast_Score=155, Evalue=1e-38,
Organism=Saccharomyces cerevisiae, GI6320077, Length=229, Percent_Identity=37.9912663755458, Blast_Score=147, Evalue=3e-36,
Organism=Saccharomyces cerevisiae, GI6321465, Length=270, Percent_Identity=34.4444444444444, Blast_Score=133, Evalue=4e-32,
Organism=Saccharomyces cerevisiae, GI6322994, Length=308, Percent_Identity=29.5454545454545, Blast_Score=131, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6324000, Length=310, Percent_Identity=29.3548387096774, Blast_Score=122, Evalue=7e-29,
Organism=Saccharomyces cerevisiae, GI6323429, Length=285, Percent_Identity=28.7719298245614, Blast_Score=110, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6321390, Length=217, Percent_Identity=33.6405529953917, Blast_Score=109, Evalue=9e-25,
Organism=Saccharomyces cerevisiae, GI6320854, Length=238, Percent_Identity=33.1932773109244, Blast_Score=106, Evalue=6e-24,
Organism=Saccharomyces cerevisiae, GI6323736, Length=234, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=5e-23,
Organism=Saccharomyces cerevisiae, GI6320197, Length=246, Percent_Identity=30.4878048780488, Blast_Score=101, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6324833, Length=239, Percent_Identity=28.0334728033473, Blast_Score=100, Evalue=4e-22,
Organism=Saccharomyces cerevisiae, GI6320602, Length=230, Percent_Identity=33.0434782608696, Blast_Score=100, Evalue=7e-22,
Organism=Saccharomyces cerevisiae, GI6322651, Length=228, Percent_Identity=29.3859649122807, Blast_Score=99, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6321709, Length=281, Percent_Identity=29.8932384341637, Blast_Score=97, Evalue=6e-21,
Organism=Saccharomyces cerevisiae, GI6322704, Length=286, Percent_Identity=29.3706293706294, Blast_Score=96, Evalue=7e-21,
Organism=Saccharomyces cerevisiae, GI6319554, Length=270, Percent_Identity=28.8888888888889, Blast_Score=96, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6325281, Length=235, Percent_Identity=31.9148936170213, Blast_Score=95, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6324691, Length=248, Percent_Identity=27.4193548387097, Blast_Score=94, Evalue=5e-20,
Organism=Drosophila melanogaster, GI18859657, Length=342, Percent_Identity=33.6257309941521, Blast_Score=171, Evalue=1e-42,
Organism=Drosophila melanogaster, GI281360146, Length=291, Percent_Identity=34.7079037800687, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI281360138, Length=291, Percent_Identity=34.7079037800687, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI281360142, Length=291, Percent_Identity=34.7079037800687, Blast_Score=169, Evalue=2e-42,
Organism=Drosophila melanogaster, GI21357333, Length=291, Percent_Identity=34.7079037800687, Blast_Score=169, Evalue=2e-42,
Organism=Drosophila melanogaster, GI281360136, Length=291, Percent_Identity=34.7079037800687, Blast_Score=169, Evalue=3e-42,
Organism=Drosophila melanogaster, GI24644411, Length=291, Percent_Identity=34.7079037800687, Blast_Score=169, Evalue=3e-42,
Organism=Drosophila melanogaster, GI281360144, Length=291, Percent_Identity=34.7079037800687, Blast_Score=169, Evalue=3e-42,
Organism=Drosophila melanogaster, GI281360140, Length=291, Percent_Identity=34.7079037800687, Blast_Score=169, Evalue=3e-42,
Organism=Drosophila melanogaster, GI24644145, Length=308, Percent_Identity=33.7662337662338, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI28571849, Length=281, Percent_Identity=36.6548042704626, Blast_Score=165, Evalue=6e-41,
Organism=Drosophila melanogaster, GI28571847, Length=281, Percent_Identity=36.6548042704626, Blast_Score=165, Evalue=6e-41,
Organism=Drosophila melanogaster, GI24581396, Length=284, Percent_Identity=36.2676056338028, Blast_Score=164, Evalue=9e-41,
Organism=Drosophila melanogaster, GI161076486, Length=230, Percent_Identity=36.5217391304348, Blast_Score=148, Evalue=6e-36,
Organism=Drosophila melanogaster, GI161076488, Length=230, Percent_Identity=36.5217391304348, Blast_Score=148, Evalue=7e-36,
Organism=Drosophila melanogaster, GI17137560, Length=230, Percent_Identity=36.5217391304348, Blast_Score=148, Evalue=7e-36,
Organism=Drosophila melanogaster, GI24660075, Length=312, Percent_Identity=30.4487179487179, Blast_Score=139, Evalue=3e-33,
Organism=Drosophila melanogaster, GI281365776, Length=312, Percent_Identity=30.4487179487179, Blast_Score=139, Evalue=3e-33,
Organism=Drosophila melanogaster, GI45552965, Length=312, Percent_Identity=30.4487179487179, Blast_Score=139, Evalue=4e-33,
Organism=Drosophila melanogaster, GI24652279, Length=195, Percent_Identity=36.9230769230769, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI19921202, Length=292, Percent_Identity=29.4520547945205, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI21355121, Length=383, Percent_Identity=27.6762402088773, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI20129423, Length=225, Percent_Identity=32.4444444444444, Blast_Score=125, Evalue=7e-29,
Organism=Drosophila melanogaster, GI24656825, Length=288, Percent_Identity=30.2083333333333, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24656820, Length=296, Percent_Identity=30.4054054054054, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI281363136, Length=293, Percent_Identity=30.3754266211604, Blast_Score=122, Evalue=5e-28,
Organism=Drosophila melanogaster, GI78707192, Length=293, Percent_Identity=30.3754266211604, Blast_Score=122, Evalue=5e-28,
Organism=Drosophila melanogaster, GI24639486, Length=286, Percent_Identity=27.6223776223776, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI20129529, Length=246, Percent_Identity=28.8617886178862, Blast_Score=119, Evalue=5e-27,
Organism=Drosophila melanogaster, GI28574878, Length=230, Percent_Identity=34.7826086956522, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24665814, Length=230, Percent_Identity=34.7826086956522, Blast_Score=115, Evalue=4e-26,
Organism=Drosophila melanogaster, GI19920408, Length=248, Percent_Identity=32.6612903225806, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI281361487, Length=254, Percent_Identity=30.3149606299213, Blast_Score=111, Evalue=8e-25,
Organism=Drosophila melanogaster, GI24649446, Length=247, Percent_Identity=31.1740890688259, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24639391, Length=238, Percent_Identity=31.9327731092437, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24640100, Length=239, Percent_Identity=29.7071129707113, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24651451, Length=247, Percent_Identity=31.9838056680162, Blast_Score=108, Evalue=4e-24,
Organism=Drosophila melanogaster, GI18860063, Length=254, Percent_Identity=29.5275590551181, Blast_Score=108, Evalue=5e-24,
Organism=Drosophila melanogaster, GI24658770, Length=235, Percent_Identity=31.4893617021277, Blast_Score=99, Evalue=7e-21,
Organism=Drosophila melanogaster, GI24663015, Length=256, Percent_Identity=27.734375, Blast_Score=98, Evalue=9e-21,
Organism=Drosophila melanogaster, GI17137738, Length=252, Percent_Identity=30.5555555555556, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI17738151, Length=247, Percent_Identity=28.3400809716599, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI17864540, Length=254, Percent_Identity=26.7716535433071, Blast_Score=93, Evalue=3e-19,
Organism=Drosophila melanogaster, GI28573010, Length=254, Percent_Identity=26.3779527559055, Blast_Score=92, Evalue=8e-19,
Organism=Drosophila melanogaster, GI45554047, Length=166, Percent_Identity=33.7349397590361, Blast_Score=85, Evalue=8e-17,
Organism=Drosophila melanogaster, GI28573181, Length=167, Percent_Identity=28.1437125748503, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI221378492, Length=288, Percent_Identity=25, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003593
- InterPro:   IPR005938
- InterPro:   IPR003959
- InterPro:   IPR003960
- InterPro:   IPR003338
- InterPro:   IPR004201
- InterPro:   IPR015415 [H]

Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N; PF09336 Vps4_C [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 44202; Mature: 44202

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAVSMQYLVDKGIEYAHKAVSADKAGDYETAIKYYNSAIDLLSKYLKLYPDSPLAETYR
CCEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
DLVQKYKNRVALLEKYLSNSVKIGGSQGEEGSIDDVVEVLEPEKRSNKNTFKDLVDLEEV
HHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHCCHHCCCCHHHHHHHHHHHH
KQALKRSVIYPVKTPHLYPLGWAQGILLFGPPGCGKTELAIALANEVDAVLINVSPATVM
HHHHHHCCCCCCCCCCCCCCHHHCCEEEECCCCCCCHHHHEEECCCCCEEEEECCHHHHH
SKWLGDTEKNVKKIFDKAREYASQGKPVIIFIDEVDSLLQPLGNEVGGEKRMRNQFLIEM
HHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHHEEEE
DGLKSKENKKMPLFVVGATNKPWTLDIGFIRRFEKRIYVPPPNSEVRKQLFIHFIGKLKD
CCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHH
IYTIDNIDYEKLADLTENYSPADIASIVKEVQNNVAEELNEKGLSKPEDIKQSRPLTTED
HHEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHH
FVKVIEKRKPSIDPSWLEAYKEWQEKYGAL
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIAVSMQYLVDKGIEYAHKAVSADKAGDYETAIKYYNSAIDLLSKYLKLYPDSPLAETYR
CCEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
DLVQKYKNRVALLEKYLSNSVKIGGSQGEEGSIDDVVEVLEPEKRSNKNTFKDLVDLEEV
HHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHCCHHCCCCHHHHHHHHHHHH
KQALKRSVIYPVKTPHLYPLGWAQGILLFGPPGCGKTELAIALANEVDAVLINVSPATVM
HHHHHHCCCCCCCCCCCCCCHHHCCEEEECCCCCCCHHHHEEECCCCCEEEEECCHHHHH
SKWLGDTEKNVKKIFDKAREYASQGKPVIIFIDEVDSLLQPLGNEVGGEKRMRNQFLIEM
HHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHHEEEE
DGLKSKENKKMPLFVVGATNKPWTLDIGFIRRFEKRIYVPPPNSEVRKQLFIHFIGKLKD
CCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHH
IYTIDNIDYEKLADLTENYSPADIASIVKEVQNNVAEELNEKGLSKPEDIKQSRPLTTED
HHEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHH
FVKVIEKRKPSIDPSWLEAYKEWQEKYGAL
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]