| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883484
Identifier: 218883484
GI number: 218883484
Start: 159731
End: 161023
Strand: Direct
Name: 218883484
Synonym: DKAM_0170
Alternate gene names: NA
Gene position: 159731-161023 (Clockwise)
Preceding gene: 218883483
Following gene: 218883493
Centisome position: 11.7
GC content: 40.91
Gene sequence:
>1293_bases ATGAGGGCTCAGCTTCCACTTGTAATAGCGGTTACACTACTCGTGTTCGTGATCACTACAACCCTGTTCTACATGACGTC AACGCTAACACATACATCCAGTATATGGATGAATGAGAGTGAAGAGTCTACATGGAGGAGCATAAATGAACAATTAGACA GCGTGATAATATCGGCGATCTCAGGCGCTAATGAAACAGCATACATGGCGTTCAAGCAGAAATGGGGAAGACAGGTGATG TCATATAATGATATAAATCAGAGTAGCATCACATATGTGAGGAGATGCGGCAGATCAAGCATCACTTATTACACTATATA TGATTATACTAGTTTTGTGAGACCAGGAAACCTTACCAGATACTATGATGGGGTTGGAGTATGGTATGCTCTTAATAATT TCGCGGGTATATTATATAATCAAACACTCCAGGTTGACTATGCTAACGCGATTTCAAGCAGTATTTACTCAGTGCTGAAT AACTGGGCAAGCCTAGTAAGGGATATCGGTATCACAGTAATAGTATATCCGCCAACCGTTAAATACGAGTACGTGTTCGA AGGTGACCCCTCTACACCATTCTCCAGGTTCAGTAACAGGCTTAGGGTGAATGTCAGCTTAGACGTGTTCTCGGTGAATG CCGGGTACAAGCATTTCGATAAATACGTTGAATACGGGTTTAACGTAACGTTTTACAGGGGGAGGATGATTAATGACAGC TTCATTATTCCATTATACATCACCGCCTACGTTGATATCAATGGGCAGAGGTCGATGTATATACCAGATCCATCCACGGT GACGCTGAGAATATATAGTAAAATGCTTGAGAGAATAGGCTTCATTAATTTAACTAGTGATGAATGGGGCAGCAACTACG CTAGTGGATACCTATATGCCTCATACTACTATGACAATGGTACAACACTACTCTTATTCAAGATACCGGTAACCATAGAT ACGTATAAATACTGGGATACAATTGTAATAGATAAAATCCTGAATGCCACGGTATTCTGTCGAGACAGCTCATGGTTCAT TAATTACATGGCACCTCGAAGACTCGATAGTAATACATGCTGCGGGATAGGATCAAGCTGCTATTCTTCGACTACCCAAG CCTACTTGTTCGCCGGGCTTCTTTCACTAGATATAAATGGTTTAACAATGTTCAGCGGGGTTAAAATAGTGTGGAAGACG TATTTTGATGCAACTAGTAAATCATATACTATTTTCGCAAGCCTCTACGGGGATGAAAAAAGCGATTTCCAAATAACTGT ACCTCTATACTAG
Upstream 100 bases:
>100_bases TAGAATCAAGGAGTGGCTCAGGGTACACCTTGAGCTACGTTTACAGCATTGGCACTATCTATGGCACGGTTATAAAATAT GGTGTCAGGGTGATATATTG
Downstream 100 bases:
>100_bases ACTAGAATCACTGACCTCCTCCACGTTTCGGAGAGCAGGGGCTTTCGGCTGTAAAGTAACAACCCTAGAACCAGAGGGAG AATCGTCCACTTGAGAGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MRAQLPLVIAVTLLVFVITTTLFYMTSTLTHTSSIWMNESEESTWRSINEQLDSVIISAISGANETAYMAFKQKWGRQVM SYNDINQSSITYVRRCGRSSITYYTIYDYTSFVRPGNLTRYYDGVGVWYALNNFAGILYNQTLQVDYANAISSSIYSVLN NWASLVRDIGITVIVYPPTVKYEYVFEGDPSTPFSRFSNRLRVNVSLDVFSVNAGYKHFDKYVEYGFNVTFYRGRMINDS FIIPLYITAYVDINGQRSMYIPDPSTVTLRIYSKMLERIGFINLTSDEWGSNYASGYLYASYYYDNGTTLLLFKIPVTID TYKYWDTIVIDKILNATVFCRDSSWFINYMAPRRLDSNTCCGIGSSCYSSTTQAYLFAGLLSLDINGLTMFSGVKIVWKT YFDATSKSYTIFASLYGDEKSDFQITVPLY
Sequences:
>Translated_430_residues MRAQLPLVIAVTLLVFVITTTLFYMTSTLTHTSSIWMNESEESTWRSINEQLDSVIISAISGANETAYMAFKQKWGRQVM SYNDINQSSITYVRRCGRSSITYYTIYDYTSFVRPGNLTRYYDGVGVWYALNNFAGILYNQTLQVDYANAISSSIYSVLN NWASLVRDIGITVIVYPPTVKYEYVFEGDPSTPFSRFSNRLRVNVSLDVFSVNAGYKHFDKYVEYGFNVTFYRGRMINDS FIIPLYITAYVDINGQRSMYIPDPSTVTLRIYSKMLERIGFINLTSDEWGSNYASGYLYASYYYDNGTTLLLFKIPVTID TYKYWDTIVIDKILNATVFCRDSSWFINYMAPRRLDSNTCCGIGSSCYSSTTQAYLFAGLLSLDINGLTMFSGVKIVWKT YFDATSKSYTIFASLYGDEKSDFQITVPLY >Mature_430_residues MRAQLPLVIAVTLLVFVITTTLFYMTSTLTHTSSIWMNESEESTWRSINEQLDSVIISAISGANETAYMAFKQKWGRQVM SYNDINQSSITYVRRCGRSSITYYTIYDYTSFVRPGNLTRYYDGVGVWYALNNFAGILYNQTLQVDYANAISSSIYSVLN NWASLVRDIGITVIVYPPTVKYEYVFEGDPSTPFSRFSNRLRVNVSLDVFSVNAGYKHFDKYVEYGFNVTFYRGRMINDS FIIPLYITAYVDINGQRSMYIPDPSTVTLRIYSKMLERIGFINLTSDEWGSNYASGYLYASYYYDNGTTLLLFKIPVTID TYKYWDTIVIDKILNATVFCRDSSWFINYMAPRRLDSNTCCGIGSSCYSSTTQAYLFAGLLSLDINGLTMFSGVKIVWKT YFDATSKSYTIFASLYGDEKSDFQITVPLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49251; Mature: 49251
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAQLPLVIAVTLLVFVITTTLFYMTSTLTHTSSIWMNESEESTWRSINEQLDSVIISAI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHH SGANETAYMAFKQKWGRQVMSYNDINQSSITYVRRCGRSSITYYTIYDYTSFVRPGNLTR CCCCCHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEECCHHHCCCCCCEE YYDGVGVWYALNNFAGILYNQTLQVDYANAISSSIYSVLNNWASLVRDIGITVIVYPPTV EECCEEEEEECCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCE KYEYVFEGDPSTPFSRFSNRLRVNVSLDVFSVNAGYKHFDKYVEYGFNVTFYRGRMINDS EEEEEEECCCCCHHHHCCCEEEEEEEEEEEEECCCHHHHHHHHHCCCEEEEEECEEECCC FIIPLYITAYVDINGQRSMYIPDPSTVTLRIYSKMLERIGFINLTSDEWGSNYASGYLYA EEEEEEEEEEEEECCCEEEECCCCCEEEEHHHHHHHHHCCEEEEECCCCCCCCCCCEEEE SYYYDNGTTLLLFKIPVTIDTYKYWDTIVIDKILNATVFCRDSSWFINYMAPRRLDSNTC EEEECCCCEEEEEEECEEEECHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCCCCCCCC CGIGSSCYSSTTQAYLFAGLLSLDINGLTMFSGVKIVWKTYFDATSKSYTIFASLYGDEK CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEHHCCCCCCEEEEEEEECCCC SDFQITVPLY CCEEEEEECC >Mature Secondary Structure MRAQLPLVIAVTLLVFVITTTLFYMTSTLTHTSSIWMNESEESTWRSINEQLDSVIISAI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHH SGANETAYMAFKQKWGRQVMSYNDINQSSITYVRRCGRSSITYYTIYDYTSFVRPGNLTR CCCCCHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEECCHHHCCCCCCEE YYDGVGVWYALNNFAGILYNQTLQVDYANAISSSIYSVLNNWASLVRDIGITVIVYPPTV EECCEEEEEECCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCE KYEYVFEGDPSTPFSRFSNRLRVNVSLDVFSVNAGYKHFDKYVEYGFNVTFYRGRMINDS EEEEEEECCCCCHHHHCCCEEEEEEEEEEEEECCCHHHHHHHHHCCCEEEEEECEEECCC FIIPLYITAYVDINGQRSMYIPDPSTVTLRIYSKMLERIGFINLTSDEWGSNYASGYLYA EEEEEEEEEEEEECCCEEEECCCCCEEEEHHHHHHHHHCCEEEEECCCCCCCCCCCEEEE SYYYDNGTTLLLFKIPVTIDTYKYWDTIVIDKILNATVFCRDSSWFINYMAPRRLDSNTC EEEECCCCEEEEEEECEEEECHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCCCCCCCC CGIGSSCYSSTTQAYLFAGLLSLDINGLTMFSGVKIVWKTYFDATSKSYTIFASLYGDEK CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEHHCCCCCCEEEEEEEECCCC SDFQITVPLY CCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA