| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883483
Identifier: 218883483
GI number: 218883483
Start: 159321
End: 159731
Strand: Direct
Name: 218883483
Synonym: DKAM_0169
Alternate gene names: NA
Gene position: 159321-159731 (Clockwise)
Preceding gene: 218883482
Following gene: 218883484
Centisome position: 11.67
GC content: 46.47
Gene sequence:
>411_bases ATGGAGCTGGAGGAGGTAGTTTTGAGGGGGCAGCTACAGGTTCTGGTCTCATCCATGGCGCTGGCTTTAACGGTTGCGGT GATCGCATTGTTGTTTACATCTATATACGCGTATACCTCGAACTACAGGATTGTGGTTAGAGGTGGTAATGTATATGATG TACTGAGGGAGAAACCCTACTGGAGTGCCTGTAGCCTAGCCGATGAATTATTAACAAGACTCAATGCAATACAGGTCTCC GTCAATATCACTGAGTACAAGTTAACTGGCGGTGTAAGCCTGGTTAGGAGCGAGAACTGTACTGCCAGCGTAGAATCAAG GAGTGGCTCAGGGTACACCTTGAGCTACGTTTACAGCATTGGCACTATCTATGGCACGGTTATAAAATATGGTGTCAGGG TGATATATTGA
Upstream 100 bases:
>100_bases ATGTCTACGAGGTGTCGAATACGGTGAATCCCCCGCCTCAAGGTGGAAGTAAGATATCATCTTATATAAGAATTGGCATG TTTACTTATATGGTTGACTT
Downstream 100 bases:
>100_bases TGAGGGCTCAGCTTCCACTTGTAATAGCGGTTACACTACTCGTGTTCGTGATCACTACAACCCTGTTCTACATGACGTCA ACGCTAACACATACATCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MELEEVVLRGQLQVLVSSMALALTVAVIALLFTSIYAYTSNYRIVVRGGNVYDVLREKPYWSACSLADELLTRLNAIQVS VNITEYKLTGGVSLVRSENCTASVESRSGSGYTLSYVYSIGTIYGTVIKYGVRVIY
Sequences:
>Translated_136_residues MELEEVVLRGQLQVLVSSMALALTVAVIALLFTSIYAYTSNYRIVVRGGNVYDVLREKPYWSACSLADELLTRLNAIQVS VNITEYKLTGGVSLVRSENCTASVESRSGSGYTLSYVYSIGTIYGTVIKYGVRVIY >Mature_136_residues MELEEVVLRGQLQVLVSSMALALTVAVIALLFTSIYAYTSNYRIVVRGGNVYDVLREKPYWSACSLADELLTRLNAIQVS VNITEYKLTGGVSLVRSENCTASVESRSGSGYTLSYVYSIGTIYGTVIKYGVRVIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14967; Mature: 14967
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELEEVVLRGQLQVLVSSMALALTVAVIALLFTSIYAYTSNYRIVVRGGNVYDVLREKPY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCC WSACSLADELLTRLNAIQVSVNITEYKLTGGVSLVRSENCTASVESRSGSGYTLSYVYSI CHHHHHHHHHHHHHHHEEEEEEEEEEEECCCEEEEECCCCCEEEECCCCCCEEEHHHHHH GTIYGTVIKYGVRVIY HHHHHHHHHHHHEEEC >Mature Secondary Structure MELEEVVLRGQLQVLVSSMALALTVAVIALLFTSIYAYTSNYRIVVRGGNVYDVLREKPY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCC WSACSLADELLTRLNAIQVSVNITEYKLTGGVSLVRSENCTASVESRSGSGYTLSYVYSI CHHHHHHHHHHHHHHHEEEEEEEEEEEECCCEEEEECCCCCEEEECCCCCCEEEHHHHHH GTIYGTVIKYGVRVIY HHHHHHHHHHHHEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA