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The map label for this gene is ycdQ [C]

Identifier: 218883466

GI number: 218883466

Start: 139687

End: 141099

Strand: Reverse

Name: ycdQ [C]

Synonym: DKAM_0152

Alternate gene names: 218883466

Gene position: 141099-139687 (Counterclockwise)

Preceding gene: 218883471

Following gene: 218883465

Centisome position: 10.34

GC content: 45.58

Gene sequence:

>1413_bases
GTGCAGGTGTTTCTAGTGTTGGATCTAGCCATAGTATTAATGATAACACTGCCACAACTATGGTTTTACATAGTATACGC
CGTGTTCGCTTGGAGAGCCGCCAACTGTAGACAGCATACTACTAGCTGTAATCCCGGAGAAGTCAGTATATCATTCATAA
TCCCAGTAAGGCGTGAGCCGTTGGAATACCTTGAGCAAGCAGTAGAATACGTACATGGCCTCGGCATCCGGGACTATGAG
ATCATAATTGTATCGGATGATGACGAGGGCTTCAAACAGGTGTTTTTCGACAAGCTCTATGAATGGAGAAGAAGAGGATT
AAACGTTTGGATTATATGGAGGAGTAGACCAGTAGGGTATCGTACAGGTGCTTTAAACACAGCCCTCTGGCTCTCGAGGG
GCGACTACATATACGTGTTGGACGTGGATTCCAGACTCGATAAATGCCTCCTAGACTGTGCCATGGAAATACTTAGTTCA
CATGAAGACACAGTAGCCGTTGTAGGGAGATGGGAACCATTGAACCTCGATACCAGGTTAAGCGAGGCACTGGGTTACTC
GATGAGGTTTATTGTTGGAGCCATATATCATGGTAGAAACTGTATGGGTTTAAACGTGTTCCCACTTGGCACCGGCACCC
TCTTCAAGTCCAGGTATCTTAAGGAGATCCTGAATGGATGGGATCAGGAGAGGATACAGGATGATATGGAGATCGGCTCT
AGAATAATGTATCACGGATTAAAGGTTAGATACCTCAGCGACTGCGCCGTCTACGTTGAAAACCCCTCCACGTATAAGGC
ACTACGGATCCAGCAGTCTAGATGGGCTTACGGAGCCACTGATGTATTGATTGCAAGGTGGAGGCATATCCTTGGCTCTA
GGCAAGGAGTTCTAGGGAAGATCGAGGCCATACTCTTTCTCTCGCAGTACGTTGTGCCCTCAATAGTATTCCTTGGAACA
GTAATGCTTGCGGTAAATGCCTTCATAAAGCCATTCGATGTGTTAATGAGGCATGCCTACTTGATCATAGCGCTAGCTAT
CTCGCAATGGTTTTTCGGCAGATACTACTATAGAGAGGTGAAGAGACATATCGGCTCAAGTTGGAGGACCCTTGTGAACA
TGGGGAGAAGTGCAGCTGTAACAACTGCTTTATCACCTTACTACCTGTACTCGACTCTTAAAGCCCTGTTAAGGATCAGG
GTTCAATACGCTAGAACACCTAAGGGAATGTATCAGCTGAGTTCATCCAGGATTAGAATACCATGGGAGCTAATACTAGC
CGTCCTCTACGCTGTCACAGGAATAATATATTTACTCAATAATGCCATCCTCTCAGGCCTATGGTTGATTGCCAACTCCA
GTGCATATAGCTATGTTGTTTATAGGTGGCGTAAAGATGTATTCTTCAATTAG

Upstream 100 bases:

>100_bases
CTTAAGGATATACATGCATGGCCATGCCATGTTACCGGGAGCATCAGCCTTTACCCCCTTCAATGTATATATTACCTCTA
CATGTTTTTATCTTTAACTA

Downstream 100 bases:

>100_bases
TAGTGCCTACACTGGTTGAAAAAACAAGTAATAGGTGGGGGAAACGACTATAAGCGTATTTAATGGGGATTTCACAGTTG
CAGAGGCCATGGATGGATTA

Product: glycosyl transferase, family 2

Products: NA

Alternate protein names: Glycosyltransferase; Glycosyl Transferase; N-Acetylglucosaminyltransferase; Glucosaminyltransferase; Glycosyl Transferase Family 2 Protein; Biofilm PGA Synthesis N-Glycosyltransferase PgaC; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; N-Glycosyltransferase PgaC; Glycosyl Transferase Group 2 Family Protein; Glucosyltransferase Family Protein; Family 2 Glycosyltransferase; Sensory Transduction Regulatory Protein; Membrane Glocosyltransferase; Glycosyl Transferase Group 2 Family; Intercellular Adhesion Protein A; N-Glycosyltransferase; Glucosyltransferase

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MQVFLVLDLAIVLMITLPQLWFYIVYAVFAWRAANCRQHTTSCNPGEVSISFIIPVRREPLEYLEQAVEYVHGLGIRDYE
IIIVSDDDEGFKQVFFDKLYEWRRRGLNVWIIWRSRPVGYRTGALNTALWLSRGDYIYVLDVDSRLDKCLLDCAMEILSS
HEDTVAVVGRWEPLNLDTRLSEALGYSMRFIVGAIYHGRNCMGLNVFPLGTGTLFKSRYLKEILNGWDQERIQDDMEIGS
RIMYHGLKVRYLSDCAVYVENPSTYKALRIQQSRWAYGATDVLIARWRHILGSRQGVLGKIEAILFLSQYVVPSIVFLGT
VMLAVNAFIKPFDVLMRHAYLIIALAISQWFFGRYYYREVKRHIGSSWRTLVNMGRSAAVTTALSPYYLYSTLKALLRIR
VQYARTPKGMYQLSSSRIRIPWELILAVLYAVTGIIYLLNNAILSGLWLIANSSAYSYVVYRWRKDVFFN

Sequences:

>Translated_470_residues
MQVFLVLDLAIVLMITLPQLWFYIVYAVFAWRAANCRQHTTSCNPGEVSISFIIPVRREPLEYLEQAVEYVHGLGIRDYE
IIIVSDDDEGFKQVFFDKLYEWRRRGLNVWIIWRSRPVGYRTGALNTALWLSRGDYIYVLDVDSRLDKCLLDCAMEILSS
HEDTVAVVGRWEPLNLDTRLSEALGYSMRFIVGAIYHGRNCMGLNVFPLGTGTLFKSRYLKEILNGWDQERIQDDMEIGS
RIMYHGLKVRYLSDCAVYVENPSTYKALRIQQSRWAYGATDVLIARWRHILGSRQGVLGKIEAILFLSQYVVPSIVFLGT
VMLAVNAFIKPFDVLMRHAYLIIALAISQWFFGRYYYREVKRHIGSSWRTLVNMGRSAAVTTALSPYYLYSTLKALLRIR
VQYARTPKGMYQLSSSRIRIPWELILAVLYAVTGIIYLLNNAILSGLWLIANSSAYSYVVYRWRKDVFFN
>Mature_470_residues
MQVFLVLDLAIVLMITLPQLWFYIVYAVFAWRAANCRQHTTSCNPGEVSISFIIPVRREPLEYLEQAVEYVHGLGIRDYE
IIIVSDDDEGFKQVFFDKLYEWRRRGLNVWIIWRSRPVGYRTGALNTALWLSRGDYIYVLDVDSRLDKCLLDCAMEILSS
HEDTVAVVGRWEPLNLDTRLSEALGYSMRFIVGAIYHGRNCMGLNVFPLGTGTLFKSRYLKEILNGWDQERIQDDMEIGS
RIMYHGLKVRYLSDCAVYVENPSTYKALRIQQSRWAYGATDVLIARWRHILGSRQGVLGKIEAILFLSQYVVPSIVFLGT
VMLAVNAFIKPFDVLMRHAYLIIALAISQWFFGRYYYREVKRHIGSSWRTLVNMGRSAAVTTALSPYYLYSTLKALLRIR
VQYARTPKGMYQLSSSRIRIPWELILAVLYAVTGIIYLLNNAILSGLWLIANSSAYSYVVYRWRKDVFFN

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54444; Mature: 54444

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVFLVLDLAIVLMITLPQLWFYIVYAVFAWRAANCRQHTTSCNPGEVSISFIIPVRREP
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCEEEEEEECCCCCH
LEYLEQAVEYVHGLGIRDYEIIIVSDDDEGFKQVFFDKLYEWRRRGLNVWIIWRSRPVGY
HHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
RTGALNTALWLSRGDYIYVLDVDSRLDKCLLDCAMEILSSHEDTVAVVGRWEPLNLDTRL
CCCCCHHHHEEECCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHH
SEALGYSMRFIVGAIYHGRNCMGLNVFPLGTGTLFKSRYLKEILNGWDQERIQDDMEIGS
HHHHCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RIMYHGLKVRYLSDCAVYVENPSTYKALRIQQSRWAYGATDVLIARWRHILGSRQGVLGK
HHHHCCEEEEEEECEEEEEECCCCCHHEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHH
IEAILFLSQYVVPSIVFLGTVMLAVNAFIKPFDVLMRHAYLIIALAISQWFFGRYYYREV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRHIGSSWRTLVNMGRSAAVTTALSPYYLYSTLKALLRIRVQYARTPKGMYQLSSSRIRI
HHHHCHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEC
PWELILAVLYAVTGIIYLLNNAILSGLWLIANSSAYSYVVYRWRKDVFFN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEEHHCCCCC
>Mature Secondary Structure
MQVFLVLDLAIVLMITLPQLWFYIVYAVFAWRAANCRQHTTSCNPGEVSISFIIPVRREP
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCEEEEEEECCCCCH
LEYLEQAVEYVHGLGIRDYEIIIVSDDDEGFKQVFFDKLYEWRRRGLNVWIIWRSRPVGY
HHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
RTGALNTALWLSRGDYIYVLDVDSRLDKCLLDCAMEILSSHEDTVAVVGRWEPLNLDTRL
CCCCCHHHHEEECCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHH
SEALGYSMRFIVGAIYHGRNCMGLNVFPLGTGTLFKSRYLKEILNGWDQERIQDDMEIGS
HHHHCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RIMYHGLKVRYLSDCAVYVENPSTYKALRIQQSRWAYGATDVLIARWRHILGSRQGVLGK
HHHHCCEEEEEEECEEEEEECCCCCHHEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHH
IEAILFLSQYVVPSIVFLGTVMLAVNAFIKPFDVLMRHAYLIIALAISQWFFGRYYYREV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRHIGSSWRTLVNMGRSAAVTTALSPYYLYSTLKALLRIRVQYARTPKGMYQLSSSRIRI
HHHHCHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEC
PWELILAVLYAVTGIIYLLNNAILSGLWLIANSSAYSYVVYRWRKDVFFN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA