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The map label for this gene is 218883461

Identifier: 218883461

GI number: 218883461

Start: 133882

End: 134502

Strand: Direct

Name: 218883461

Synonym: DKAM_0147

Alternate gene names: NA

Gene position: 133882-134502 (Clockwise)

Preceding gene: 218883454

Following gene: 218883462

Centisome position: 9.81

GC content: 42.83

Gene sequence:

>621_bases
GTGATTTTTATAGAGTTTTATACTGGTAACAGGGATATTGATGAATTGATCAGGAATGCAGCCACAATATTGTTTTATGG
CGTAGCCGGCTCTGGGAAGACATCTATGCTGATAACCATAGCCGGTAACTATTGCAGGAATGTGAAGTGCCTATATATGT
CCACTGAGGAGACCTTACACTATGAGAAGGTGGCTGTAAACCCGGATAAATACCGTGATGTATTATTCACCGAGGTATAT
GATTTCAATAAACTTGTTGAGCTAGCTACATTAATCTACCTCTATGGATCCAATGTTATTTTTGTAGATAGCTTAAACTC
CTTATTCAGGCTTGAACCACTAGCGGAGAATTCCATGTCGAGGCTCGCATACGTGGTGGCATCAATTAGGAGGGTTGTCG
AGGATGCAGGTGGAAAAATGTTCGCCTCGGCACAGGTGAGAACCCGGGAGGGTGAGAGTGAGCCTGTGGGTAAACCTGTA
TTAGAATACTACTTTGACGTGATAATAGAGCTAAATATAGGGGACTCAGTGAGATATGCTAGGATAGTTAAGCCAAAGCA
CATGGGCGGGGAGAAGATTCATCGCTTTAGAATAACAAGGGAGGGTGTAGAATGGATATAG

Upstream 100 bases:

>100_bases
ATAAACCACTTGGGCTCGTATATGGCTATAACCAGTGGCCGCCTTTGCAAATCAATGAGTCACCAATATTACTCCTCTCA
ATACATAGAATACTTGGAAG

Downstream 100 bases:

>100_bases
AGTCCTATATTGTCTGGATCGTTAAATACTACTTGCCAGCAATGATCGCTAATGCCTCTCCACTACTAGTGAAGGGTGAT
AAAGTCATAGATAAGGGGAG

Product: AAA ATPase

Products: NA

Alternate protein names: DNA Repair And Recombination Protein RadB

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MIFIEFYTGNRDIDELIRNAATILFYGVAGSGKTSMLITIAGNYCRNVKCLYMSTEETLHYEKVAVNPDKYRDVLFTEVY
DFNKLVELATLIYLYGSNVIFVDSLNSLFRLEPLAENSMSRLAYVVASIRRVVEDAGGKMFASAQVRTREGESEPVGKPV
LEYYFDVIIELNIGDSVRYARIVKPKHMGGEKIHRFRITREGVEWI

Sequences:

>Translated_206_residues
MIFIEFYTGNRDIDELIRNAATILFYGVAGSGKTSMLITIAGNYCRNVKCLYMSTEETLHYEKVAVNPDKYRDVLFTEVY
DFNKLVELATLIYLYGSNVIFVDSLNSLFRLEPLAENSMSRLAYVVASIRRVVEDAGGKMFASAQVRTREGESEPVGKPV
LEYYFDVIIELNIGDSVRYARIVKPKHMGGEKIHRFRITREGVEWI
>Mature_206_residues
MIFIEFYTGNRDIDELIRNAATILFYGVAGSGKTSMLITIAGNYCRNVKCLYMSTEETLHYEKVAVNPDKYRDVLFTEVY
DFNKLVELATLIYLYGSNVIFVDSLNSLFRLEPLAENSMSRLAYVVASIRRVVEDAGGKMFASAQVRTREGESEPVGKPV
LEYYFDVIIELNIGDSVRYARIVKPKHMGGEKIHRFRITREGVEWI

Specific function: Unknown

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23550; Mature: 23550

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFIEFYTGNRDIDELIRNAATILFYGVAGSGKTSMLITIAGNYCRNVKCLYMSTEETLH
CEEEEEECCCCCHHHHHHCCEEEEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCHHEE
YEKVAVNPDKYRDVLFTEVYDFNKLVELATLIYLYGSNVIFVDSLNSLFRLEPLAENSMS
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHEECCHHHHHHH
RLAYVVASIRRVVEDAGGKMFASAQVRTREGESEPVGKPVLEYYFDVIIELNIGDSVRYA
HHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHEEEEECCCCCEEEE
RIVKPKHMGGEKIHRFRITREGVEWI
EECCCCCCCCHHHEEEEEECCCCCCC
>Mature Secondary Structure
MIFIEFYTGNRDIDELIRNAATILFYGVAGSGKTSMLITIAGNYCRNVKCLYMSTEETLH
CEEEEEECCCCCHHHHHHCCEEEEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCHHEE
YEKVAVNPDKYRDVLFTEVYDFNKLVELATLIYLYGSNVIFVDSLNSLFRLEPLAENSMS
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHEECCHHHHHHH
RLAYVVASIRRVVEDAGGKMFASAQVRTREGESEPVGKPVLEYYFDVIIELNIGDSVRYA
HHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHEEEEECCCCCEEEE
RIVKPKHMGGEKIHRFRITREGVEWI
EECCCCCCCCHHHEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA