| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883454
Identifier: 218883454
GI number: 218883454
Start: 128115
End: 128477
Strand: Direct
Name: 218883454
Synonym: DKAM_0140
Alternate gene names: NA
Gene position: 128115-128477 (Clockwise)
Preceding gene: 218883452
Following gene: 218883461
Centisome position: 9.38
GC content: 43.53
Gene sequence:
>363_bases ATGTCCAGCCAGGATCCAATAAAAATCATGGCTGAACTACTCAAATCAGGTGCTGTAATGCTTGCCGAGACATGCCCAGT GGAGGGATGCAACCTACCATTATTTAAGCTGAAAAGCGGAGAAGTGGTGTGCCCTCTGCATGGTAGGATACATGTGGTTA AAACCGATGAAGAGGCTAAGGAAGTTTATTCAAGGGCAACACTCTCAATGTTACTGGAAAAGGTGGAGGCAACGGCTATT AGAGTCATCGATTCATTGATAAGTGAGCCAGATATCGATTCAACTGAGATAATTAAATGGCTTGAAGTACTTGAAAGGGT TGCACGATTAAAGATTATTGCTAGGAAGCGGGATACCCCGTAA
Upstream 100 bases:
>100_bases CAATTCCATCACCTTAATCAGTATGATTACTCCTAATACATAACGTTACTACTGGTTAAAAACCATTAAATAAATAAATC TTAAGAATAGAGGTGAAGGC
Downstream 100 bases:
>100_bases AGAAGCTTAAGTATCATAAACCCGGCTGTTCATACTGATCAGTCTCCCATATACTATATCCCATATCCTACCATATACTT CACTAAGGGGTTTCGATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MSSQDPIKIMAELLKSGAVMLAETCPVEGCNLPLFKLKSGEVVCPLHGRIHVVKTDEEAKEVYSRATLSMLLEKVEATAI RVIDSLISEPDIDSTEIIKWLEVLERVARLKIIARKRDTP
Sequences:
>Translated_120_residues MSSQDPIKIMAELLKSGAVMLAETCPVEGCNLPLFKLKSGEVVCPLHGRIHVVKTDEEAKEVYSRATLSMLLEKVEATAI RVIDSLISEPDIDSTEIIKWLEVLERVARLKIIARKRDTP >Mature_119_residues SSQDPIKIMAELLKSGAVMLAETCPVEGCNLPLFKLKSGEVVCPLHGRIHVVKTDEEAKEVYSRATLSMLLEKVEATAIR VIDSLISEPDIDSTEIIKWLEVLERVARLKIIARKRDTP
Specific function: Unknown
COG id: COG1645
COG function: function code R; Uncharacterized Zn-finger containing protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0148 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009563 - InterPro: IPR022954 [H]
Pfam domain/function: PF06677 Auto_anti-p27 [H]
EC number: NA
Molecular weight: Translated: 13370; Mature: 13239
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSQDPIKIMAELLKSGAVMLAETCPVEGCNLPLFKLKSGEVVCPLHGRIHVVKTDEEAK CCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCEEEECCCEEEEEECCHHHH EVYSRATLSMLLEKVEATAIRVIDSLISEPDIDSTEIIKWLEVLERVARLKIIARKRDTP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SSQDPIKIMAELLKSGAVMLAETCPVEGCNLPLFKLKSGEVVCPLHGRIHVVKTDEEAK CCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCEEEECCCEEEEEECCHHHH EVYSRATLSMLLEKVEATAIRVIDSLISEPDIDSTEIIKWLEVLERVARLKIIARKRDTP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10382966 [H]