Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883454

Identifier: 218883454

GI number: 218883454

Start: 128115

End: 128477

Strand: Direct

Name: 218883454

Synonym: DKAM_0140

Alternate gene names: NA

Gene position: 128115-128477 (Clockwise)

Preceding gene: 218883452

Following gene: 218883461

Centisome position: 9.38

GC content: 43.53

Gene sequence:

>363_bases
ATGTCCAGCCAGGATCCAATAAAAATCATGGCTGAACTACTCAAATCAGGTGCTGTAATGCTTGCCGAGACATGCCCAGT
GGAGGGATGCAACCTACCATTATTTAAGCTGAAAAGCGGAGAAGTGGTGTGCCCTCTGCATGGTAGGATACATGTGGTTA
AAACCGATGAAGAGGCTAAGGAAGTTTATTCAAGGGCAACACTCTCAATGTTACTGGAAAAGGTGGAGGCAACGGCTATT
AGAGTCATCGATTCATTGATAAGTGAGCCAGATATCGATTCAACTGAGATAATTAAATGGCTTGAAGTACTTGAAAGGGT
TGCACGATTAAAGATTATTGCTAGGAAGCGGGATACCCCGTAA

Upstream 100 bases:

>100_bases
CAATTCCATCACCTTAATCAGTATGATTACTCCTAATACATAACGTTACTACTGGTTAAAAACCATTAAATAAATAAATC
TTAAGAATAGAGGTGAAGGC

Downstream 100 bases:

>100_bases
AGAAGCTTAAGTATCATAAACCCGGCTGTTCATACTGATCAGTCTCCCATATACTATATCCCATATCCTACCATATACTT
CACTAAGGGGTTTCGATGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MSSQDPIKIMAELLKSGAVMLAETCPVEGCNLPLFKLKSGEVVCPLHGRIHVVKTDEEAKEVYSRATLSMLLEKVEATAI
RVIDSLISEPDIDSTEIIKWLEVLERVARLKIIARKRDTP

Sequences:

>Translated_120_residues
MSSQDPIKIMAELLKSGAVMLAETCPVEGCNLPLFKLKSGEVVCPLHGRIHVVKTDEEAKEVYSRATLSMLLEKVEATAI
RVIDSLISEPDIDSTEIIKWLEVLERVARLKIIARKRDTP
>Mature_119_residues
SSQDPIKIMAELLKSGAVMLAETCPVEGCNLPLFKLKSGEVVCPLHGRIHVVKTDEEAKEVYSRATLSMLLEKVEATAIR
VIDSLISEPDIDSTEIIKWLEVLERVARLKIIARKRDTP

Specific function: Unknown

COG id: COG1645

COG function: function code R; Uncharacterized Zn-finger containing protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0148 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009563
- InterPro:   IPR022954 [H]

Pfam domain/function: PF06677 Auto_anti-p27 [H]

EC number: NA

Molecular weight: Translated: 13370; Mature: 13239

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQDPIKIMAELLKSGAVMLAETCPVEGCNLPLFKLKSGEVVCPLHGRIHVVKTDEEAK
CCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCEEEECCCEEEEEECCHHHH
EVYSRATLSMLLEKVEATAIRVIDSLISEPDIDSTEIIKWLEVLERVARLKIIARKRDTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSQDPIKIMAELLKSGAVMLAETCPVEGCNLPLFKLKSGEVVCPLHGRIHVVKTDEEAK
CCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCEEEECCCEEEEEECCHHHH
EVYSRATLSMLLEKVEATAIRVIDSLISEPDIDSTEIIKWLEVLERVARLKIIARKRDTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]