| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883460
Identifier: 218883460
GI number: 218883460
Start: 133187
End: 133831
Strand: Reverse
Name: 218883460
Synonym: DKAM_0146
Alternate gene names: NA
Gene position: 133831-133187 (Counterclockwise)
Preceding gene: 218883463
Following gene: 218883459
Centisome position: 9.8
GC content: 44.96
Gene sequence:
>645_bases TTGCAAAGGCGGCCACTGGTTATAGCCATATACGAGCCCAAGTGGTTTATACATGTACTCAGCGTTCTACGTGAGAGAAA CATCTTTTTTGGCCATTATTATACCAGGGATGAAGTCCCATACGGTAGCATCCTATACACGGACTACTCACTGTTCTCTG AGGAGGTAGCCGGTAGAAGCGATATACTCGTCTTCTATGACCCTACCCATGACTGCAGGATCTTAGAGAAGGCTATCCTA GCCAGCTACTTGAAAGATATATATAATGAGCTAGTGGTCGGCGTGGATCCTGGTAGGCGAATAGGCTATATAGTGGTAGG TGACGGCGAATACATAATACATGGAATAGGAGAATACATAGACTTAATCCATGTGGTCAACTACTTGAAGAAGTGCGTAC CCGCTGAGAGAATAATCATAAGAGTCGGCTCAAGACACAGAGGCATTGAATTAGCGTCAATACTTAAAAAAGACACGGGG GTGAAGGTGGAAGTTGTCAGTGAAGACGACACCACGCCTAGCTCCGTAAATATTGATGACGCTAGGTTACTGGGGTCAAG GATAGGAAGGATAAAGCCGTTTAGAGAGAAAGACGTATATGCTGCCTACAAGATCGCCATGAAGAAGGGAATAGAGGTGG TTTAA
Upstream 100 bases:
>100_bases ATCAATTCATCAATATCCCTGTTACCAGTATAAAACTCTATAAAAATCACCTTCCAAGTATTCTATGTATTGAGAGGAGT AATATTGGTGACTCATTGAT
Downstream 100 bases:
>100_bases ACTGCCTCGTTTAAACCTCTCAAAGGGAGAGGCCGTCAGGGTATTCGGTCCTATGTCAATAAGCATCCTCAATGGGTCTA TTACTATATTGGGGAAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MQRRPLVIAIYEPKWFIHVLSVLRERNIFFGHYYTRDEVPYGSILYTDYSLFSEEVAGRSDILVFYDPTHDCRILEKAIL ASYLKDIYNELVVGVDPGRRIGYIVVGDGEYIIHGIGEYIDLIHVVNYLKKCVPAERIIIRVGSRHRGIELASILKKDTG VKVEVVSEDDTTPSSVNIDDARLLGSRIGRIKPFREKDVYAAYKIAMKKGIEVV
Sequences:
>Translated_214_residues MQRRPLVIAIYEPKWFIHVLSVLRERNIFFGHYYTRDEVPYGSILYTDYSLFSEEVAGRSDILVFYDPTHDCRILEKAIL ASYLKDIYNELVVGVDPGRRIGYIVVGDGEYIIHGIGEYIDLIHVVNYLKKCVPAERIIIRVGSRHRGIELASILKKDTG VKVEVVSEDDTTPSSVNIDDARLLGSRIGRIKPFREKDVYAAYKIAMKKGIEVV >Mature_214_residues MQRRPLVIAIYEPKWFIHVLSVLRERNIFFGHYYTRDEVPYGSILYTDYSLFSEEVAGRSDILVFYDPTHDCRILEKAIL ASYLKDIYNELVVGVDPGRRIGYIVVGDGEYIIHGIGEYIDLIHVVNYLKKCVPAERIIIRVGSRHRGIELASILKKDTG VKVEVVSEDDTTPSSVNIDDARLLGSRIGRIKPFREKDVYAAYKIAMKKGIEVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24481; Mature: 24481
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRPLVIAIYEPKWFIHVLSVLRERNIFFGHYYTRDEVPYGSILYTDYSLFSEEVAGRS CCCCCEEEEEECCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCEEEEHHHHHHHHHCCCC DILVFYDPTHDCRILEKAILASYLKDIYNELVVGVDPGRRIGYIVVGDGEYIIHGIGEYI CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCCEEEHHHHHHH DLIHVVNYLKKCVPAERIIIRVGSRHRGIELASILKKDTGVKVEVVSEDDTTPSSVNIDD HHHHHHHHHHHHCCHHEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHH ARLLGSRIGRIKPFREKDVYAAYKIAMKKGIEVV HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQRRPLVIAIYEPKWFIHVLSVLRERNIFFGHYYTRDEVPYGSILYTDYSLFSEEVAGRS CCCCCEEEEEECCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCEEEEHHHHHHHHHCCCC DILVFYDPTHDCRILEKAILASYLKDIYNELVVGVDPGRRIGYIVVGDGEYIIHGIGEYI CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCCEEEHHHHHHH DLIHVVNYLKKCVPAERIIIRVGSRHRGIELASILKKDTGVKVEVVSEDDTTPSSVNIDD HHHHHHHHHHHHCCHHEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHH ARLLGSRIGRIKPFREKDVYAAYKIAMKKGIEVV HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA