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The map label for this gene is 218883459

Identifier: 218883459

GI number: 218883459

Start: 131941

End: 133134

Strand: Reverse

Name: 218883459

Synonym: DKAM_0145

Alternate gene names: NA

Gene position: 133134-131941 (Counterclockwise)

Preceding gene: 218883460

Following gene: 218883458

Centisome position: 9.75

GC content: 44.89

Gene sequence:

>1194_bases
ATGTCAATAAGCATCCTCAATGGGTCTATTACTATATTGGGGAAAACAGTTAGAAGCGATGAGAAGGTGATCATCCATAG
GTTCAGAAACTATATCATAGAGGCCCTTGAAGACGCCGAACTAGATATAGTCATGGCTAATGAATCCGATATACAGCCAG
TCGATGTTGAAGACCCTTACAAGTTGAGAAACACCCTGGCCGTGGAAATAGTTTCAAGCGGGCTCAGGAAAATCATTGCG
ATAGGGGATACGGATTCAGGCAAGACGTCTTTCACCACACTTCTATTAAACACCGCGATCTCGGCTGGGTTAAAACCCTG
CATAATCGATGGGGACATAGGGCAGGCCAATGTAGGGCCACCGGGATTCATATCACTCGGAGTCCCCGTCAACCAGGTTC
TCTGGAACACTGAGATCCCTGCCTACATAATGAGGTTCGTAGGCGATATCCGTCCACAGAACTATATCTACTTGATTCCA
AGAGAACTCCGCTGGCTAGCTGAAAAGGCTGAATCATCGGGATGCAACATGGTTGTTATTGATACCGATGGATGGGTGAG
GGATTCAGTTGCGATACACTACAAGCATTATTTAATCGAAGTAGTGGAACCGGACGCCCTCGTGGTTATCGGGGGTAAAT
TAAGCAGGTACTTTAAAAAGTATGAGAAGATAGGGGTAAAGGTGTATGAAGTACCTGAGCCCCGTGTTAAGCGGGCCCGT
AACAGGGAGGAAAGAAGACTCTTAAGAAGCATGAGGTACAGGGATTTCCTAGCTGATGCACCATTGAGAAAGATAGAAAT
GAATTCTGTACTTGTCACTGGTCACCCATTATTCCATGGATACCCTGTCGATGCATCTAGCTTGATCGACCTAATAGATG
GTAGGGTAATATATGTGTCTCAGCTAATGGATGAGCTCCACGTCTACGGCTTCATAAAGACGTATAATGGCGAGGAGATC
GCCAAGAGGCTTGGAGCTACAAAGGTAAAGATATATCAGCCAGGGTTCGAGAGAAATATCTATTGCGGGATTAGATCCCT
AGGGGGATCAGATTATCCCTGCATAGTTGAGAAGCTGAGTTTCGAGGATAACACAGTGGTCATTAGAACCAGATATCAGG
ATAGAATAGATGTATTAAAACTCTCTCCCATTAAACTTAGAGATGACTACACAGAGGAGTTTATTGAGGTGTAA

Upstream 100 bases:

>100_bases
TATGCTGCCTACAAGATCGCCATGAAGAAGGGAATAGAGGTGGTTTAAACTGCCTCGTTTAAACCTCTCAAAGGGAGAGG
CCGTCAGGGTATTCGGTCCT

Downstream 100 bases:

>100_bases
CACTTGGATCTCAAAGCAGTTGAGAAACTAGCTGGTTTCCTCAACAAGGAAATACTTGACCTAGGCACAGTGAATCCCGA
GTACACTGTAACCAGGGCAG

Product: putative GTPase or GTP-binding protein

Products: NA

Alternate protein names: Polynucleotide kinase TK1956 [H]

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MSISILNGSITILGKTVRSDEKVIIHRFRNYIIEALEDAELDIVMANESDIQPVDVEDPYKLRNTLAVEIVSSGLRKIIA
IGDTDSGKTSFTTLLLNTAISAGLKPCIIDGDIGQANVGPPGFISLGVPVNQVLWNTEIPAYIMRFVGDIRPQNYIYLIP
RELRWLAEKAESSGCNMVVIDTDGWVRDSVAIHYKHYLIEVVEPDALVVIGGKLSRYFKKYEKIGVKVYEVPEPRVKRAR
NREERRLLRSMRYRDFLADAPLRKIEMNSVLVTGHPLFHGYPVDASSLIDLIDGRVIYVSQLMDELHVYGFIKTYNGEEI
AKRLGATKVKIYQPGFERNIYCGIRSLGGSDYPCIVEKLSFEDNTVVIRTRYQDRIDVLKLSPIKLRDDYTEEFIEV

Sequences:

>Translated_397_residues
MSISILNGSITILGKTVRSDEKVIIHRFRNYIIEALEDAELDIVMANESDIQPVDVEDPYKLRNTLAVEIVSSGLRKIIA
IGDTDSGKTSFTTLLLNTAISAGLKPCIIDGDIGQANVGPPGFISLGVPVNQVLWNTEIPAYIMRFVGDIRPQNYIYLIP
RELRWLAEKAESSGCNMVVIDTDGWVRDSVAIHYKHYLIEVVEPDALVVIGGKLSRYFKKYEKIGVKVYEVPEPRVKRAR
NREERRLLRSMRYRDFLADAPLRKIEMNSVLVTGHPLFHGYPVDASSLIDLIDGRVIYVSQLMDELHVYGFIKTYNGEEI
AKRLGATKVKIYQPGFERNIYCGIRSLGGSDYPCIVEKLSFEDNTVVIRTRYQDRIDVLKLSPIKLRDDYTEEFIEV
>Mature_396_residues
SISILNGSITILGKTVRSDEKVIIHRFRNYIIEALEDAELDIVMANESDIQPVDVEDPYKLRNTLAVEIVSSGLRKIIAI
GDTDSGKTSFTTLLLNTAISAGLKPCIIDGDIGQANVGPPGFISLGVPVNQVLWNTEIPAYIMRFVGDIRPQNYIYLIPR
ELRWLAEKAESSGCNMVVIDTDGWVRDSVAIHYKHYLIEVVEPDALVVIGGKLSRYFKKYEKIGVKVYEVPEPRVKRARN
REERRLLRSMRYRDFLADAPLRKIEMNSVLVTGHPLFHGYPVDASSLIDLIDGRVIYVSQLMDELHVYGFIKTYNGEEIA
KRLGATKVKIYQPGFERNIYCGIRSLGGSDYPCIVEKLSFEDNTVVIRTRYQDRIDVLKLSPIKLRDDYTEEFIEV

Specific function: Polynucleotide kinase that can phosphorylate the 5'- hydroxyl groups of both single-stranded RNA (ssRNA) and single- stranded DNA (ssDNA). Exhibits a strong preference for ssRNA [H]

COG id: COG1341

COG function: function code R; Predicted GTPase or GTP-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: =2.7.1.78 [H]

Molecular weight: Translated: 45036; Mature: 44904

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISILNGSITILGKTVRSDEKVIIHRFRNYIIEALEDAELDIVMANESDIQPVDVEDPY
CEEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCH
KLRNTLAVEIVSSGLRKIIAIGDTDSGKTSFTTLLLNTAISAGLKPCIIDGDIGQANVGP
HHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC
PGFISLGVPVNQVLWNTEIPAYIMRFVGDIRPQNYIYLIPRELRWLAEKAESSGCNMVVI
CCEEEECCCHHHHEECCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCEEEE
DTDGWVRDSVAIHYKHYLIEVVEPDALVVIGGKLSRYFKKYEKIGVKVYEVPEPRVKRAR
CCCCCEECCEEEEEEEEEEEEECCCEEEEECCHHHHHHHHHHHCCCEEEECCCHHHHHHC
NREERRLLRSMRYRDFLADAPLRKIEMNSVLVTGHPLFHGYPVDASSLIDLIDGRVIYVS
CHHHHHHHHHHHHHHHHHCCCCCEEEECEEEEECCCEEECCCCCHHHHHHHHCCCEEEHH
QLMDELHVYGFIKTYNGEEIAKRLGATKVKIYQPGFERNIYCGIRSLGGSDYPCIVEKLS
HHHHHHHHEEEEEECCHHHHHHHCCCCEEEEECCCCCCEEEEEEEECCCCCCCHHHEEEC
FEDNTVVIRTRYQDRIDVLKLSPIKLRDDYTEEFIEV
CCCCEEEEEEECCCCCCEEEECCEEECCCHHHHHHCC
>Mature Secondary Structure 
SISILNGSITILGKTVRSDEKVIIHRFRNYIIEALEDAELDIVMANESDIQPVDVEDPY
EEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCH
KLRNTLAVEIVSSGLRKIIAIGDTDSGKTSFTTLLLNTAISAGLKPCIIDGDIGQANVGP
HHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC
PGFISLGVPVNQVLWNTEIPAYIMRFVGDIRPQNYIYLIPRELRWLAEKAESSGCNMVVI
CCEEEECCCHHHHEECCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCEEEE
DTDGWVRDSVAIHYKHYLIEVVEPDALVVIGGKLSRYFKKYEKIGVKVYEVPEPRVKRAR
CCCCCEECCEEEEEEEEEEEEECCCEEEEECCHHHHHHHHHHHCCCEEEECCCHHHHHHC
NREERRLLRSMRYRDFLADAPLRKIEMNSVLVTGHPLFHGYPVDASSLIDLIDGRVIYVS
CHHHHHHHHHHHHHHHHHCCCCCEEEECEEEEECCCEEECCCCCHHHHHHHHCCCEEEHH
QLMDELHVYGFIKTYNGEEIAKRLGATKVKIYQPGFERNIYCGIRSLGGSDYPCIVEKLS
HHHHHHHHEEEEEECCHHHHHHHCCCCEEEEECCCCCCEEEEEEEECCCCCCCHHHEEEC
FEDNTVVIRTRYQDRIDVLKLSPIKLRDDYTEEFIEV
CCCCEEEEEEECCCCCCEEEECCEEECCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA