| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is glmM [H]
Identifier: 218883433
GI number: 218883433
Start: 104984
End: 106354
Strand: Direct
Name: glmM [H]
Synonym: DKAM_0119
Alternate gene names: 218883433
Gene position: 104984-106354 (Clockwise)
Preceding gene: 218883431
Following gene: 218883435
Centisome position: 7.69
GC content: 47.48
Gene sequence:
>1371_bases ATGAAGTACCCTGAAGAACTGGATCCCATCCTTGCATATAGGATAGGCCTCAGCCTCGGCAGGCTGGGGTTGTCGGATAC CAGCCACTTAGTCTATGATACAAGGACCACTAGCCATGTCCTGGTTCACGCGCTAGTATCAGGGATAACAGCTGGAGGAA TAGATGCCAGCATCATTGGACTAGCTCCAACTCCTGTGGCAGGATATGCCGGGTTAAAATATAAGAGTATAGGTATCAGT GTGACAGCCAGTCATAATCCCCCTGAGTATAATGGGTTTAAATTCTATGATGTGGAGGGGTATGAGTTTACACGTGAGCT GGAGAAGAAAATTGAGGAGCTGGTCTCAACACCGTTGAAGCCGGTTGAATGGAACAAGTCCGGCAAATCCAACCATGATC CTCTCCCATTAGACAACTATATTAAAGACCTCGTCGAGTCATCTACCCCGGTTAAAAAAGCCTGGCAACCCAAGGTAGTT ATAGACTGCGCTAATGGGGCATCATACCATGTAACACCATTAGTCACCAGATTACTAGGTGGGATACCTATTACCGTAAA CTGTAGTCCAGACGGCTTCTTCCCGGGAAGACCTCCTGAACCTAGGAAGGATGTACTTGAAAAACTATTACCACTCTACG GTAGCGTCGAGCCAGCGGTGATTCTAGCGCATGACGGCGATGCGGACCGATTAGCAGTCCTAGATCGCCATGCCGGCTTT ATTCGACAGGATAGATTGCTCGCATTGTTCGCGAAAATACTCTTGGAGGAGAGAAGGGGGCTAGTGATAGTTAGCGTGGA CACTGGTAGAGTGATTGAGGAGGTTGTTAAGGAAGCCGGCGGCAGACTTGAGAGATACATACTCGGTAAAACCCATGAAA GAGTTAAGGAACTCGGAGCAAGCAACGTCATCATGGCTGGAGAGCCATGGAAGTTAATTGATACCTCATGGGGCACATGG GTTGATGGAGTAAGGCAGGCAGCCTTACTTGTTAAATTAATTATTGAAAGAGGCAAGCCCCTCGTAAAGATACTCGAGGA GGAGAAAATACCGGACTACCCGTGGGATAGAAGAAGCTACGTGCTTGACCCGCCCGAGGTCAGGGTAGACGTGTACAGGG AACTGGTGGAGGAGTTGAAGGGCAGGCTTGGAGAGCCATCGAATATAATTAATGTAGATGGCTATAGATTCGAGTACCAT GATGGCTCATGGGTACTGATAAGGATCAGTGGTACAGAGCCTAAGATAAGATTATATGCTGAAGCTGAAACCCTTGAAAG ACTCAGGGAGATTACGGAAACGGTGGATGAGTTAGTTAAGAAAATAGCATCTCTGAAAAATGCTAGGGTGGCATCTATTA TGATTGGCTGA
Upstream 100 bases:
>100_bases ATATACCATGTATTAACAGGTTTTTAATGAAGAATAATGAATTAATTCAGTGTAATAGAGGTTGTTGATAATGAGGTTGT TTGGCACAGCTGGTATACGA
Downstream 100 bases:
>100_bases GGCATGAAGAGCTCTATTTCTCTACAAATAATATGATGTCATCGTAGAGCCCATGGGGTAGCACTATTAAATGACTCGTG GTTAACCGTGTAAATATCTT
Product: phospho-sugar mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MKYPEELDPILAYRIGLSLGRLGLSDTSHLVYDTRTTSHVLVHALVSGITAGGIDASIIGLAPTPVAGYAGLKYKSIGIS VTASHNPPEYNGFKFYDVEGYEFTRELEKKIEELVSTPLKPVEWNKSGKSNHDPLPLDNYIKDLVESSTPVKKAWQPKVV IDCANGASYHVTPLVTRLLGGIPITVNCSPDGFFPGRPPEPRKDVLEKLLPLYGSVEPAVILAHDGDADRLAVLDRHAGF IRQDRLLALFAKILLEERRGLVIVSVDTGRVIEEVVKEAGGRLERYILGKTHERVKELGASNVIMAGEPWKLIDTSWGTW VDGVRQAALLVKLIIERGKPLVKILEEEKIPDYPWDRRSYVLDPPEVRVDVYRELVEELKGRLGEPSNIINVDGYRFEYH DGSWVLIRISGTEPKIRLYAEAETLERLREITETVDELVKKIASLKNARVASIMIG
Sequences:
>Translated_456_residues MKYPEELDPILAYRIGLSLGRLGLSDTSHLVYDTRTTSHVLVHALVSGITAGGIDASIIGLAPTPVAGYAGLKYKSIGIS VTASHNPPEYNGFKFYDVEGYEFTRELEKKIEELVSTPLKPVEWNKSGKSNHDPLPLDNYIKDLVESSTPVKKAWQPKVV IDCANGASYHVTPLVTRLLGGIPITVNCSPDGFFPGRPPEPRKDVLEKLLPLYGSVEPAVILAHDGDADRLAVLDRHAGF IRQDRLLALFAKILLEERRGLVIVSVDTGRVIEEVVKEAGGRLERYILGKTHERVKELGASNVIMAGEPWKLIDTSWGTW VDGVRQAALLVKLIIERGKPLVKILEEEKIPDYPWDRRSYVLDPPEVRVDVYRELVEELKGRLGEPSNIINVDGYRFEYH DGSWVLIRISGTEPKIRLYAEAETLERLREITETVDELVKKIASLKNARVASIMIG >Mature_456_residues MKYPEELDPILAYRIGLSLGRLGLSDTSHLVYDTRTTSHVLVHALVSGITAGGIDASIIGLAPTPVAGYAGLKYKSIGIS VTASHNPPEYNGFKFYDVEGYEFTRELEKKIEELVSTPLKPVEWNKSGKSNHDPLPLDNYIKDLVESSTPVKKAWQPKVV IDCANGASYHVTPLVTRLLGGIPITVNCSPDGFFPGRPPEPRKDVLEKLLPLYGSVEPAVILAHDGDADRLAVLDRHAGF IRQDRLLALFAKILLEERRGLVIVSVDTGRVIEEVVKEAGGRLERYILGKTHERVKELGASNVIMAGEPWKLIDTSWGTW VDGVRQAALLVKLIIERGKPLVKILEEEKIPDYPWDRRSYVLDPPEVRVDVYRELVEELKGRLGEPSNIINVDGYRFEYH DGSWVLIRISGTEPKIRLYAEAETLERLREITETVDELVKKIASLKNARVASIMIG
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1789566, Length=421, Percent_Identity=25.8907363420428, Blast_Score=105, Evalue=7e-24, Organism=Escherichia coli, GI1788361, Length=457, Percent_Identity=28.8840262582057, Blast_Score=92, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 50807; Mature: 50807
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYPEELDPILAYRIGLSLGRLGLSDTSHLVYDTRTTSHVLVHALVSGITAGGIDASIIG CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCEEEEE LAPTPVAGYAGLKYKSIGISVTASHNPPEYNGFKFYDVEGYEFTRELEKKIEELVSTPLK CCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCC PVEWNKSGKSNHDPLPLDNYIKDLVESSTPVKKAWQPKVVIDCANGASYHVTPLVTRLLG CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCEEHHHHHHHHHC GIPITVNCSPDGFFPGRPPEPRKDVLEKLLPLYGSVEPAVILAHDGDADRLAVLDRHAGF CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCH IRQDRLLALFAKILLEERRGLVIVSVDTGRVIEEVVKEAGGRLERYILGKTHERVKELGA HHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCEEHHHHCCHHHHHHHCCC SNVIMAGEPWKLIDTSWGTWVDGVRQAALLVKLIIERGKPLVKILEEEKIPDYPWDRRSY CCEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCE VLDPPEVRVDVYRELVEELKGRLGEPSNIINVDGYRFEYHDGSWVLIRISGTEPKIRLYA ECCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEECCCEEEEEEECCCCCEEEEE EAETLERLREITETVDELVKKIASLKNARVASIMIG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC >Mature Secondary Structure MKYPEELDPILAYRIGLSLGRLGLSDTSHLVYDTRTTSHVLVHALVSGITAGGIDASIIG CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCEEEEE LAPTPVAGYAGLKYKSIGISVTASHNPPEYNGFKFYDVEGYEFTRELEKKIEELVSTPLK CCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCC PVEWNKSGKSNHDPLPLDNYIKDLVESSTPVKKAWQPKVVIDCANGASYHVTPLVTRLLG CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCEEHHHHHHHHHC GIPITVNCSPDGFFPGRPPEPRKDVLEKLLPLYGSVEPAVILAHDGDADRLAVLDRHAGF CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCH IRQDRLLALFAKILLEERRGLVIVSVDTGRVIEEVVKEAGGRLERYILGKTHERVKELGA HHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCEEHHHHCCHHHHHHHCCC SNVIMAGEPWKLIDTSWGTWVDGVRQAALLVKLIIERGKPLVKILEEEKIPDYPWDRRSY CCEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCE VLDPPEVRVDVYRELVEELKGRLGEPSNIINVDGYRFEYHDGSWVLIRISGTEPKIRLYA ECCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEECCCEEEEEEECCCCCEEEEE EAETLERLREITETVDELVKKIASLKNARVASIMIG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11930014 [H]