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The map label for this gene is argF [H]

Identifier: 218883431

GI number: 218883431

Start: 103212

End: 104285

Strand: Direct

Name: argF [H]

Synonym: DKAM_0117

Alternate gene names: 218883431

Gene position: 103212-104285 (Clockwise)

Preceding gene: 218883427

Following gene: 218883433

Centisome position: 7.56

GC content: 47.67

Gene sequence:

>1074_bases
ATGGGAAGACATAAACCCTGGTTCGTTGGATATCTAAAAGGCAAGGATTGGCTCTCTAACTATGACTATGATATAGACAC
GATATTCAAGGTTCTACAGGCCGCGAAAGAGTTGAAACAGATGTATCATAGTGGTGTTAGAAAAGTAAATTGGCTCGAAG
GGAAGATGCTGTACCTGATATTCTATAATAAAAGCCTGAGGACGAGGAATAGCTTCCAGACTGGTGTGTATCAGCTGGGC
GGGCAGGCTACCTATATTAGTCCTGACCAGGTTTATGCCCCCACACTACCTGAAGACATGGTACCATATCAGACGGAGGC
TATAAGTGATGTAGCGAGGGTTCTAAGCAGGTATGGGGACGGCATAGCTATAAGAATATATGGTGATGCCGCTAAATGGG
TAATCGGGCGTGGACATAGAATAATAAGGGAATTCGCTAAGTGGGCCGATATTCCAGTGTTAAACATGGAGGATGACGTG
TGGCATCCATTCCAGTCGCTAGCTGATGCGCAGGCAGCCCTTGAAGCACTAGGTTGGCCCAGGGATCTTAGAGGCAAAAA
AGTCGTCGTGAGCTACGCATATAGCGGTGGGCTGAAACCATTGGCTGTACCACAGGATGTGGCAAGCATGTTCGCACTGC
TTGGTGCAGACGTGTATGTGGCCCACCCACCAGGCTTCGAGTTAATGGATGAAGCAATGCAGATAGCTAAGAAATATGCC
GAGCACTGGGGAAGCGAGTTCAAGATCGTCCACGACATGGATGAAGCATTCGAAGGTGCGACAATAGTCTACCCGAAGGC
CTGGAGCCCTAAAGGCTTCTTCCCACCATACAATAATGTTGTAGATAAGGATGGGGCTAAGGCATACCAGGATAAATTCA
AGAACTGGATTGTAACCATGGAGAGGCTTGAGAAGGCTGGTAAGCCATACTACATGCATTGTGGACCAGCTGATAGAGGA
CAGGAGGTAACAGACGAAGTTCTAGACAGCTATGAGAAGAGTCTGTACTTCGAGGAAGCAGAAAACAGGCTCCACGTCCA
GAAGGCAGTTATGTCGATGGTTATGGGAGAATAG

Upstream 100 bases:

>100_bases
CTGTTATCTATCCCACTGATTGTGGGCTCTCATGATTAAAATTTATTAATTCAACCAGATAATACTTATGGATCAATAAA
TCTAGGTAAGTGAGAGTGGT

Downstream 100 bases:

>100_bases
GGGTTCAGGTCTCATATAGGTTTGATATAAATTAGTTTTATCCCTTCATTTTTGTTCCCCTACATCCCTTTTTGGGTTTG
CATTTGGCTTGTGGTGTTCG

Product: aspartate/ornithine carbamoyltransferase

Products: NA

Alternate protein names: OTCase [H]

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MGRHKPWFVGYLKGKDWLSNYDYDIDTIFKVLQAAKELKQMYHSGVRKVNWLEGKMLYLIFYNKSLRTRNSFQTGVYQLG
GQATYISPDQVYAPTLPEDMVPYQTEAISDVARVLSRYGDGIAIRIYGDAAKWVIGRGHRIIREFAKWADIPVLNMEDDV
WHPFQSLADAQAALEALGWPRDLRGKKVVVSYAYSGGLKPLAVPQDVASMFALLGADVYVAHPPGFELMDEAMQIAKKYA
EHWGSEFKIVHDMDEAFEGATIVYPKAWSPKGFFPPYNNVVDKDGAKAYQDKFKNWIVTMERLEKAGKPYYMHCGPADRG
QEVTDEVLDSYEKSLYFEEAENRLHVQKAVMSMVMGE

Sequences:

>Translated_357_residues
MGRHKPWFVGYLKGKDWLSNYDYDIDTIFKVLQAAKELKQMYHSGVRKVNWLEGKMLYLIFYNKSLRTRNSFQTGVYQLG
GQATYISPDQVYAPTLPEDMVPYQTEAISDVARVLSRYGDGIAIRIYGDAAKWVIGRGHRIIREFAKWADIPVLNMEDDV
WHPFQSLADAQAALEALGWPRDLRGKKVVVSYAYSGGLKPLAVPQDVASMFALLGADVYVAHPPGFELMDEAMQIAKKYA
EHWGSEFKIVHDMDEAFEGATIVYPKAWSPKGFFPPYNNVVDKDGAKAYQDKFKNWIVTMERLEKAGKPYYMHCGPADRG
QEVTDEVLDSYEKSLYFEEAENRLHVQKAVMSMVMGE
>Mature_356_residues
GRHKPWFVGYLKGKDWLSNYDYDIDTIFKVLQAAKELKQMYHSGVRKVNWLEGKMLYLIFYNKSLRTRNSFQTGVYQLGG
QATYISPDQVYAPTLPEDMVPYQTEAISDVARVLSRYGDGIAIRIYGDAAKWVIGRGHRIIREFAKWADIPVLNMEDDVW
HPFQSLADAQAALEALGWPRDLRGKKVVVSYAYSGGLKPLAVPQDVASMFALLGADVYVAHPPGFELMDEAMQIAKKYAE
HWGSEFKIVHDMDEAFEGATIVYPKAWSPKGFFPPYNNVVDKDGAKAYQDKFKNWIVTMERLEKAGKPYYMHCGPADRGQ
EVTDEVLDSYEKSLYFEEAENRLHVQKAVMSMVMGE

Specific function: Unknown

COG id: COG0078

COG function: function code E; Ornithine carbamoyltransferase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATCase/OTCase family [H]

Homologues:

Organism=Homo sapiens, GI38788445, Length=347, Percent_Identity=27.3775216138329, Blast_Score=110, Evalue=2e-24,
Organism=Escherichia coli, GI48994908, Length=361, Percent_Identity=29.0858725761773, Blast_Score=140, Evalue=9e-35,
Organism=Escherichia coli, GI1790703, Length=365, Percent_Identity=27.9452054794521, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1786469, Length=370, Percent_Identity=27.027027027027, Blast_Score=105, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI193204318, Length=366, Percent_Identity=24.5901639344262, Blast_Score=69, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6322373, Length=341, Percent_Identity=27.2727272727273, Blast_Score=99, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006132
- InterPro:   IPR006130
- InterPro:   IPR006131
- InterPro:   IPR002292 [H]

Pfam domain/function: PF00185 OTCace; PF02729 OTCace_N [H]

EC number: =2.1.3.3 [H]

Molecular weight: Translated: 40733; Mature: 40602

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRHKPWFVGYLKGKDWLSNYDYDIDTIFKVLQAAKELKQMYHSGVRKVNWLEGKMLYLI
CCCCCCEEEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEE
FYNKSLRTRNSFQTGVYQLGGQATYISPDQVYAPTLPEDMVPYQTEAISDVARVLSRYGD
EECCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
GIAIRIYGDAAKWVIGRGHRIIREFAKWADIPVLNMEDDVWHPFQSLADAQAALEALGWP
CEEEEEECCCHHHHHHCCHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHCCC
RDLRGKKVVVSYAYSGGLKPLAVPQDVASMFALLGADVYVAHPPGFELMDEAMQIAKKYA
CCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHH
EHWGSEFKIVHDMDEAFEGATIVYPKAWSPKGFFPPYNNVVDKDGAKAYQDKFKNWIVTM
HHCCCCEEEEECHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ERLEKAGKPYYMHCGPADRGQEVTDEVLDSYEKSLYFEEAENRLHVQKAVMSMVMGE
HHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GRHKPWFVGYLKGKDWLSNYDYDIDTIFKVLQAAKELKQMYHSGVRKVNWLEGKMLYLI
CCCCCEEEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEE
FYNKSLRTRNSFQTGVYQLGGQATYISPDQVYAPTLPEDMVPYQTEAISDVARVLSRYGD
EECCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
GIAIRIYGDAAKWVIGRGHRIIREFAKWADIPVLNMEDDVWHPFQSLADAQAALEALGWP
CEEEEEECCCHHHHHHCCHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHCCC
RDLRGKKVVVSYAYSGGLKPLAVPQDVASMFALLGADVYVAHPPGFELMDEAMQIAKKYA
CCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHH
EHWGSEFKIVHDMDEAFEGATIVYPKAWSPKGFFPPYNNVVDKDGAKAYQDKFKNWIVTM
HHCCCCEEEEECHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ERLEKAGKPYYMHCGPADRGQEVTDEVLDSYEKSLYFEEAENRLHVQKAVMSMVMGE
HHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA