Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883394

Identifier: 218883394

GI number: 218883394

Start: 71271

End: 72440

Strand: Direct

Name: 218883394

Synonym: DKAM_0080

Alternate gene names: NA

Gene position: 71271-72440 (Clockwise)

Preceding gene: 218883393

Following gene: 218883395

Centisome position: 5.22

GC content: 47.09

Gene sequence:

>1170_bases
GTGTCAACCACTAAGAAAAAAAGTTTTTTTACTCTGGTGAACCTCATCCTCCTTCTCCTGTTTCTCGGAAAGCTCATTTT
CTCCCCCGTAGCTCTTGTAGTCGTCACCGACGACTCCATGCAACCCAAGCTTCACCGCGGTGACCTAGTTCTCCTACTAG
CTACCTACCTGGTGAACTACGCTCCAGGCGATGTGGTCCTCTGGTGTATTGACGATTTGAGAAGTGCTTGTTGCCTACAT
TTACTTGTCAACTCATCTAGTGAACATGTAGTAACCGCCGGCTTGTCTAATAGCGTACCTGATACTCCAGTCCCCAAGCA
GCTGGTTTACTACAAAGCCGTTTTTTCAGTACCTCTCTTGCTGTGGCTTCCCCTCGTCGCCCTTCTATATGCTTACAACT
TGCACTACTTTTATAGAAGCTACGTTCTTCGAGTATATAGTCTGAGACACCCCAGAGACCACATCTTAACAGGCGTGATC
AAGGACATGATCTACGTAAGTATGTTAGTTGCCCTAGTCAACTCGATGTTTATCGGGTCAGCATATATCGACCAAAGCCC
CCCACAGTACAACATACCCGTGGTTTCTCTAGTTAGCAGGTCCCTAGACCTGAGTGAAGGAAGGGCTTACGTAACACTAA
ATACAAGTGTGTACCTAGTTAGGAACGCTAGCTGCTCGCTAGACGACAAAACCCCTCTAGAAGTTGAATACGTGCAGGTA
GGCGAACTCGCCAACATCACCATTCACATACCCAGGGATTACTTCAGTAAGCTGTGGGCCAACGCGTCAGAGAGGAAACC
ACCCCTCACAACTCCACCGGCCTCGGTCTACCAGAGTTTCGGCTACAACTGCACTGTCCACTTTGACAAGGGATATTTAG
AAAGCGCGTTCATTGAGTCATTTACGTGGAAGGAGCCAGAAGTATACGTTAAGGAATGGAGCATCCTCGTAATCACCAAC
CCTAATCCGGTTAACCTAAATGCTACCATTGTAATCTACGACGTCTCAAGAACTAGAATAGTTAGTCAATTTAATGTGTC
GATCAACTATTTGTCGAGCTACTCGGTAGACCTGCGCGAATTAGTCGGCGAAAAGGGGTCTTACGAAGTGAGGATCTACT
ACGAGTTCCTGGGAAGTCTTCGGGTAAGAGGTGTTAGAGTTGACTTGTGA

Upstream 100 bases:

>100_bases
AGAGCACTGCGTCAACGGAAACTAGCTACTCGTTCACCGTGTATTTCTACGTGTCGCAACAATCGAGTGAGCCGCCTAGG
TAGCGCTGAGGAGAAGGGTC

Downstream 100 bases:

>100_bases
AGCAGAGGTTTTAAAGACTACAAAAAGATTGAGAATGCTACTCGTAGCCGAGGCTCTTCTAGCCGGTATAAATGGCTTAT
ACCTTACCTTAGCATTACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MSTTKKKSFFTLVNLILLLLFLGKLIFSPVALVVVTDDSMQPKLHRGDLVLLLATYLVNYAPGDVVLWCIDDLRSACCLH
LLVNSSSEHVVTAGLSNSVPDTPVPKQLVYYKAVFSVPLLLWLPLVALLYAYNLHYFYRSYVLRVYSLRHPRDHILTGVI
KDMIYVSMLVALVNSMFIGSAYIDQSPPQYNIPVVSLVSRSLDLSEGRAYVTLNTSVYLVRNASCSLDDKTPLEVEYVQV
GELANITIHIPRDYFSKLWANASERKPPLTTPPASVYQSFGYNCTVHFDKGYLESAFIESFTWKEPEVYVKEWSILVITN
PNPVNLNATIVIYDVSRTRIVSQFNVSINYLSSYSVDLRELVGEKGSYEVRIYYEFLGSLRVRGVRVDL

Sequences:

>Translated_389_residues
MSTTKKKSFFTLVNLILLLLFLGKLIFSPVALVVVTDDSMQPKLHRGDLVLLLATYLVNYAPGDVVLWCIDDLRSACCLH
LLVNSSSEHVVTAGLSNSVPDTPVPKQLVYYKAVFSVPLLLWLPLVALLYAYNLHYFYRSYVLRVYSLRHPRDHILTGVI
KDMIYVSMLVALVNSMFIGSAYIDQSPPQYNIPVVSLVSRSLDLSEGRAYVTLNTSVYLVRNASCSLDDKTPLEVEYVQV
GELANITIHIPRDYFSKLWANASERKPPLTTPPASVYQSFGYNCTVHFDKGYLESAFIESFTWKEPEVYVKEWSILVITN
PNPVNLNATIVIYDVSRTRIVSQFNVSINYLSSYSVDLRELVGEKGSYEVRIYYEFLGSLRVRGVRVDL
>Mature_388_residues
STTKKKSFFTLVNLILLLLFLGKLIFSPVALVVVTDDSMQPKLHRGDLVLLLATYLVNYAPGDVVLWCIDDLRSACCLHL
LVNSSSEHVVTAGLSNSVPDTPVPKQLVYYKAVFSVPLLLWLPLVALLYAYNLHYFYRSYVLRVYSLRHPRDHILTGVIK
DMIYVSMLVALVNSMFIGSAYIDQSPPQYNIPVVSLVSRSLDLSEGRAYVTLNTSVYLVRNASCSLDDKTPLEVEYVQVG
ELANITIHIPRDYFSKLWANASERKPPLTTPPASVYQSFGYNCTVHFDKGYLESAFIESFTWKEPEVYVKEWSILVITNP
NPVNLNATIVIYDVSRTRIVSQFNVSINYLSSYSVDLRELVGEKGSYEVRIYYEFLGSLRVRGVRVDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44044; Mature: 43912

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTKKKSFFTLVNLILLLLFLGKLIFSPVALVVVTDDSMQPKLHRGDLVLLLATYLVNY
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHC
APGDVVLWCIDDLRSACCLHLLVNSSSEHVVTAGLSNSVPDTPVPKQLVYYKAVFSVPLL
CCCCEEEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
LWLPLVALLYAYNLHYFYRSYVLRVYSLRHPRDHILTGVIKDMIYVSMLVALVNSMFIGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AYIDQSPPQYNIPVVSLVSRSLDLSEGRAYVTLNTSVYLVRNASCSLDDKTPLEVEYVQV
CCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECEEEEEECCCCCCCCCCCCEEEEEEE
GELANITIHIPRDYFSKLWANASERKPPLTTPPASVYQSFGYNCTVHFDKGYLESAFIES
CCEEEEEEEECHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCEEEEEECCCHHHHHHHHH
FTWKEPEVYVKEWSILVITNPNPVNLNATIVIYDVSRTRIVSQFNVSINYLSSYSVDLRE
CCCCCCCEEEEEEEEEEEECCCCCCEEEEEEEEECCHHEEEEEEEEEEEEECCCCCHHHH
LVGEKGSYEVRIYYEFLGSLRVRGVRVDL
HCCCCCCEEEEEEHHHHHCCEEEEEEECC
>Mature Secondary Structure 
STTKKKSFFTLVNLILLLLFLGKLIFSPVALVVVTDDSMQPKLHRGDLVLLLATYLVNY
CCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHC
APGDVVLWCIDDLRSACCLHLLVNSSSEHVVTAGLSNSVPDTPVPKQLVYYKAVFSVPLL
CCCCEEEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
LWLPLVALLYAYNLHYFYRSYVLRVYSLRHPRDHILTGVIKDMIYVSMLVALVNSMFIGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AYIDQSPPQYNIPVVSLVSRSLDLSEGRAYVTLNTSVYLVRNASCSLDDKTPLEVEYVQV
CCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECEEEEEECCCCCCCCCCCCEEEEEEE
GELANITIHIPRDYFSKLWANASERKPPLTTPPASVYQSFGYNCTVHFDKGYLESAFIES
CCEEEEEEEECHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCEEEEEECCCHHHHHHHHH
FTWKEPEVYVKEWSILVITNPNPVNLNATIVIYDVSRTRIVSQFNVSINYLSSYSVDLRE
CCCCCCCEEEEEEEEEEEECCCCCCEEEEEEEEECCHHEEEEEEEEEEEEECCCCCHHHH
LVGEKGSYEVRIYYEFLGSLRVRGVRVDL
HCCCCCCEEEEEEHHHHHCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA