Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883393

Identifier: 218883393

GI number: 218883393

Start: 70588

End: 71253

Strand: Direct

Name: 218883393

Synonym: DKAM_0079

Alternate gene names: NA

Gene position: 70588-71253 (Clockwise)

Preceding gene: 218883392

Following gene: 218883394

Centisome position: 5.17

GC content: 49.55

Gene sequence:

>666_bases
GTGCGGGCAGGGAGAGCGCTACTAGTAGTGATAGCCATCGCACTAGCCAGCTTGATAATTGTGAACGCAGCAGTATTCTC
CTATAGGTGGCTTAAGGCTAACATACCAGTCCAGCCGGCGACTGGAGCCAGCGGTGCGGCGTGTACAGGGTTCTACAGTT
CTATTGATCAACGAGGGATAGACATGCCAGATGCAGGTACAAACTACAACGCGTATACCTATGGAACCAATACGATAACC
GTAACGCCTGGAAGCCCTGTGTGCCAGTGGCCTAGCGATTCTCCCACTTACAATCTCTATGAGAGTATAAGTGTAAGAAT
ACCCCTCACAAACGGCTCGTGGTACATAAAAGACTTCTATGGGTTTGGATACCACGGGGCAGCAACCGACCCCACAGTAT
ATGTGTGGTTAAAAGTTGACACACCAATTACACCGCCGGCAGGTGTAGAATGGGCTGAACTAAGGGTCTACAAAGCCGTC
ACAGGAGAACTTGTAGCCACAATAGACTTGAAGACAAACCAAAATATATATGGCCCGATACAGCTGTCTCCCGGGGAAGC
ACTACAGCTAGATCTAAACTTCAAGAGCACTGCGTCAACGGAAACTAGCTACTCGTTCACCGTGTATTTCTACGTGTCGC
AACAATCGAGTGAGCCGCCTAGGTAG

Upstream 100 bases:

>100_bases
TCATTGCTCTTGGTTAGACGCGGCTTCGGCTAAAGCAGACTAGGGCTTTGCGAAAATTTAAAAATCCTTTTTGGCTAATA
GTAAAGTAAGGTGAATTGCG

Downstream 100 bases:

>100_bases
CGCTGAGGAGAAGGGTCGTGTCAACCACTAAGAAAAAAAGTTTTTTTACTCTGGTGAACCTCATCCTCCTTCTCCTGTTT
CTCGGAAAGCTCATTTTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MRAGRALLVVIAIALASLIIVNAAVFSYRWLKANIPVQPATGASGAACTGFYSSIDQRGIDMPDAGTNYNAYTYGTNTIT
VTPGSPVCQWPSDSPTYNLYESISVRIPLTNGSWYIKDFYGFGYHGAATDPTVYVWLKVDTPITPPAGVEWAELRVYKAV
TGELVATIDLKTNQNIYGPIQLSPGEALQLDLNFKSTASTETSYSFTVYFYVSQQSSEPPR

Sequences:

>Translated_221_residues
MRAGRALLVVIAIALASLIIVNAAVFSYRWLKANIPVQPATGASGAACTGFYSSIDQRGIDMPDAGTNYNAYTYGTNTIT
VTPGSPVCQWPSDSPTYNLYESISVRIPLTNGSWYIKDFYGFGYHGAATDPTVYVWLKVDTPITPPAGVEWAELRVYKAV
TGELVATIDLKTNQNIYGPIQLSPGEALQLDLNFKSTASTETSYSFTVYFYVSQQSSEPPR
>Mature_221_residues
MRAGRALLVVIAIALASLIIVNAAVFSYRWLKANIPVQPATGASGAACTGFYSSIDQRGIDMPDAGTNYNAYTYGTNTIT
VTPGSPVCQWPSDSPTYNLYESISVRIPLTNGSWYIKDFYGFGYHGAATDPTVYVWLKVDTPITPPAGVEWAELRVYKAV
TGELVATIDLKTNQNIYGPIQLSPGEALQLDLNFKSTASTETSYSFTVYFYVSQQSSEPPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24052; Mature: 24052

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAGRALLVVIAIALASLIIVNAAVFSYRWLKANIPVQPATGASGAACTGFYSSIDQRGI
CCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEHHHHHHHHHCCC
DMPDAGTNYNAYTYGTNTITVTPGSPVCQWPSDSPTYNLYESISVRIPLTNGSWYIKDFY
CCCCCCCCCCEEEECCCEEEECCCCCEEECCCCCCCEEEEEEEEEEEEEECCCEEEEEEC
GFGYHGAATDPTVYVWLKVDTPITPPAGVEWAELRVYKAVTGELVATIDLKTNQNIYGPI
CCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHEEEEEEECCCEEEEEEECCCCCEEEEE
QLSPGEALQLDLNFKSTASTETSYSFTVYFYVSQQSSEPPR
EECCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCC
>Mature Secondary Structure
MRAGRALLVVIAIALASLIIVNAAVFSYRWLKANIPVQPATGASGAACTGFYSSIDQRGI
CCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEHHHHHHHHHCCC
DMPDAGTNYNAYTYGTNTITVTPGSPVCQWPSDSPTYNLYESISVRIPLTNGSWYIKDFY
CCCCCCCCCCEEEECCCEEEECCCCCEEECCCCCCCEEEEEEEEEEEEEECCCEEEEEEC
GFGYHGAATDPTVYVWLKVDTPITPPAGVEWAELRVYKAVTGELVATIDLKTNQNIYGPI
CCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHEEEEEEECCCEEEEEEECCCCCEEEEE
QLSPGEALQLDLNFKSTASTETSYSFTVYFYVSQQSSEPPR
EECCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA