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The map label for this gene is yciH [C]

Identifier: 218883369

GI number: 218883369

Start: 50672

End: 50989

Strand: Direct

Name: yciH [C]

Synonym: DKAM_0055

Alternate gene names: 218883369

Gene position: 50672-50989 (Clockwise)

Preceding gene: 218883367

Following gene: 218883372

Centisome position: 3.71

GC content: 44.34

Gene sequence:

>318_bases
ATGGATGAGAAGATAGATGAATCAATATGCGGTGGGCTACCACCAGAGCTCTGTGAGCAGTCAGGAATAGAGCAGTCGCT
TGTCAAGATAAGGCTTGATACGAGAAAATTCGGTAAGGCAGTAACCATTATAGATGGATTACCAAACGATAAGGAATTCC
TCAAGCAAGTTGCGAAAGCATTGAAGACGAAGCTAGCTACTGGCGGCACATTCAAAGAGGGGAGGATAGAGCTCCAGGGA
GATCACAGGCATAGAGTAAAACAGATCCTGATAGAGGAATTCGGGATACCTCCTGAAAACATATTGGTTATAGACTAG

Upstream 100 bases:

>100_bases
CATGCTAGCCCACCATACACCAGTATAATGTTCAAAGACTTTAAAACCTCCCTCTACATATTTTCTAATTGGAATCTTTG
AGTTGGTGATGGAGTAGGCA

Downstream 100 bases:

>100_bases
GGTTGAAATACTGAACAAACTATTTTTAACCCACCCTACGTTATCCACCACTTAATAATTCAGTTTTCTAGAGATATTAA
AGTTATCTATAAATCCACAG

Product: translation initiation factor Sui1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MDEKIDESICGGLPPELCEQSGIEQSLVKIRLDTRKFGKAVTIIDGLPNDKEFLKQVAKALKTKLATGGTFKEGRIELQG
DHRHRVKQILIEEFGIPPENILVID

Sequences:

>Translated_105_residues
MDEKIDESICGGLPPELCEQSGIEQSLVKIRLDTRKFGKAVTIIDGLPNDKEFLKQVAKALKTKLATGGTFKEGRIELQG
DHRHRVKQILIEEFGIPPENILVID
>Mature_105_residues
MDEKIDESICGGLPPELCEQSGIEQSLVKIRLDTRKFGKAVTIIDGLPNDKEFLKQVAKALKTKLATGGTFKEGRIELQG
DHRHRVKQILIEEFGIPPENILVID

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022851
- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 11710; Mature: 11710

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKIDESICGGLPPELCEQSGIEQSLVKIRLDTRKFGKAVTIIDGLPNDKEFLKQVAKA
CCCCHHHHHHCCCCHHHHHHCCHHHHHHHHHHCHHHHCCEEEEECCCCCCHHHHHHHHHH
LKTKLATGGTFKEGRIELQGDHRHRVKQILIEEFGIPPENILVID
HHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCEEEEC
>Mature Secondary Structure
MDEKIDESICGGLPPELCEQSGIEQSLVKIRLDTRKFGKAVTIIDGLPNDKEFLKQVAKA
CCCCHHHHHHCCCCHHHHHHCCHHHHHHHHHHCHHHHCCEEEEECCCCCCHHHHHHHHHH
LKTKLATGGTFKEGRIELQGDHRHRVKQILIEEFGIPPENILVID
HHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]