Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883347

Identifier: 218883347

GI number: 218883347

Start: 30871

End: 31356

Strand: Direct

Name: 218883347

Synonym: DKAM_0033

Alternate gene names: NA

Gene position: 30871-31356 (Clockwise)

Preceding gene: 218883345

Following gene: 218883348

Centisome position: 2.26

GC content: 41.36

Gene sequence:

>486_bases
ATGGTTAACATAGAGGTGTGCAAACCTCTCCCCAATGGTGGATGTGAGCGGGTGGAGTATGTTATCAAAGACAGCGTGAT
TTATTTCGAGGGAGAGCACCCTCTTATATTATTCAAGCATGACCCGGATACAAGAGTATTCTGTGAGGGTTATTTCATGC
AGGTGTTTACCTGGGTGAGTGAGAAATACACTATATGGGGGGTTAAACCAGGGGGTAAATGCGTTATTGCTTCAGGTGGT
GTTTTAGAGGATCACGGCAACTACTATGTATATCTCAAGGAACCAGGTAAGATACAGAGGGTAAAGCCCGCCGGTCTTAG
CGAGTTTCTAATACTAATATTGAAAACCAAAGATTATATCCCGCTAGTGGTAGAGGATGCCAGCATAGCCTCCACACTTA
TCAATGCTGTTCATATATTTAGCGATGAATTAAACAGGGGAAAGATACTATTGCTACTAGGAAATAATATTCTTAATATT
CATTGA

Upstream 100 bases:

>100_bases
GAGACTACACAGGATCAGGTATTCGGGAGACACCTCATCTTTAATACGGTATTCGGCAAATTCATCATCAATATGGGGCT
ATTGTTGAAAGGGGTTATTA

Downstream 100 bases:

>100_bases
TTCGGGGTGTAAGTATTGTTAATCGACATGCATATTCACTGCCATGAATTAAGCCCTGATACGATAAAGGAGTATCTTGG
GAGATACAAGTTGGTGTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MVNIEVCKPLPNGGCERVEYVIKDSVIYFEGEHPLILFKHDPDTRVFCEGYFMQVFTWVSEKYTIWGVKPGGKCVIASGG
VLEDHGNYYVYLKEPGKIQRVKPAGLSEFLILILKTKDYIPLVVEDASIASTLINAVHIFSDELNRGKILLLLGNNILNI
H

Sequences:

>Translated_161_residues
MVNIEVCKPLPNGGCERVEYVIKDSVIYFEGEHPLILFKHDPDTRVFCEGYFMQVFTWVSEKYTIWGVKPGGKCVIASGG
VLEDHGNYYVYLKEPGKIQRVKPAGLSEFLILILKTKDYIPLVVEDASIASTLINAVHIFSDELNRGKILLLLGNNILNI
H
>Mature_161_residues
MVNIEVCKPLPNGGCERVEYVIKDSVIYFEGEHPLILFKHDPDTRVFCEGYFMQVFTWVSEKYTIWGVKPGGKCVIASGG
VLEDHGNYYVYLKEPGKIQRVKPAGLSEFLILILKTKDYIPLVVEDASIASTLINAVHIFSDELNRGKILLLLGNNILNI
H

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18140; Mature: 18140

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNIEVCKPLPNGGCERVEYVIKDSVIYFEGEHPLILFKHDPDTRVFCEGYFMQVFTWVS
CEEEEEECCCCCCCHHHHEEEEECCEEEEECCCCEEEEEECCCCEEEECHHHHHHHHHHC
EKYTIWGVKPGGKCVIASGGVLEDHGNYYVYLKEPGKIQRVKPAGLSEFLILILKTKDYI
CCEEEEEECCCCEEEEEECCEEECCCCEEEEECCCCCEEEECCCCCCCEEEEEEECCCCC
PLVVEDASIASTLINAVHIFSDELNRGKILLLLGNNILNIH
EEEEECCHHHHHHHHHHHEECCCCCCCEEEEEECCEEEEEC
>Mature Secondary Structure
MVNIEVCKPLPNGGCERVEYVIKDSVIYFEGEHPLILFKHDPDTRVFCEGYFMQVFTWVS
CEEEEEECCCCCCCHHHHEEEEECCEEEEECCCCEEEEEECCCCEEEECHHHHHHHHHHC
EKYTIWGVKPGGKCVIASGGVLEDHGNYYVYLKEPGKIQRVKPAGLSEFLILILKTKDYI
CCEEEEEECCCCEEEEEECCEEECCCCEEEEECCCCCEEEECCCCCCCEEEEEEECCCCC
PLVVEDASIASTLINAVHIFSDELNRGKILLLLGNNILNIH
EEEEECCHHHHHHHHHHHEECCCCCCCEEEEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA