Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883341

Identifier: 218883341

GI number: 218883341

Start: 26289

End: 26921

Strand: Direct

Name: 218883341

Synonym: DKAM_0027

Alternate gene names: NA

Gene position: 26289-26921 (Clockwise)

Preceding gene: 218883340

Following gene: 218883342

Centisome position: 1.93

GC content: 42.81

Gene sequence:

>633_bases
ATGATTCCCAGTGGATGTAGTAAGCCAATTGTTGTAATAGAGCACTTGGAAGATGGATTGAGTCCATGGATACTCCTCGA
ATACAGGCATCTCTCTGGTTTCTACGGCTCGAACTGTGTAGTCTTCGCAAATATCCCTGGGAAATACCATAGAATATTGG
GCAGGTATGGGATACCGGTTAAGGAGAGCATTATTGAGATCGTTAACAGCGGCATCATCAAGCCCGGCGAGGTGATAATA
CTTGATCCAGCCAGTCCCAGGGAGCTAACCTATGAAATCCTATCTAGAACCAAGTACGTGGTAGTTGGAGGTATACTAGG
AGATCACCCGCCTAAGAAGAGGACCCGGGAGCTTATAAGTAGCAGACTTAAATTAATTGAATCCTATAACATAGGGGATG
GGCAATACAGTATAGATGGGGCAGTCTACTACATATACTACATGCACTCAAATAAGGGAATGAACGGCTATAAATACGTG
GATGGAGTATCAATCAGAGATGGTGATAGAATAATTCATTTACCATTCAGATACCCGCTGGTAGAGGAGAAGCCGTTTAT
ATCGAGTGATCTAATCTATTATATCCTTAATAGAAGAATACCCGATCACGTCTGGGAAGAGATAAAGGGTTGA

Upstream 100 bases:

>100_bases
AAAGGATGCACTTGTATCTCAGGGGACTGCTTTCTTTTTACACAGCATGGTTATCAACCGTCTTCATATTATACGATTTG
ATCCCGGTGAAGTCATCACC

Downstream 100 bases:

>100_bases
AATACTATAGGGGAAATCCCGCCGGGGGGATTTGAACCCCCGGCCACCCGGTGTCTATGCCCTCACTACAGCCGGGCGCT
CTGCCGCTGAGCTACGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MIPSGCSKPIVVIEHLEDGLSPWILLEYRHLSGFYGSNCVVFANIPGKYHRILGRYGIPVKESIIEIVNSGIIKPGEVII
LDPASPRELTYEILSRTKYVVVGGILGDHPPKKRTRELISSRLKLIESYNIGDGQYSIDGAVYYIYYMHSNKGMNGYKYV
DGVSIRDGDRIIHLPFRYPLVEEKPFISSDLIYYILNRRIPDHVWEEIKG

Sequences:

>Translated_210_residues
MIPSGCSKPIVVIEHLEDGLSPWILLEYRHLSGFYGSNCVVFANIPGKYHRILGRYGIPVKESIIEIVNSGIIKPGEVII
LDPASPRELTYEILSRTKYVVVGGILGDHPPKKRTRELISSRLKLIESYNIGDGQYSIDGAVYYIYYMHSNKGMNGYKYV
DGVSIRDGDRIIHLPFRYPLVEEKPFISSDLIYYILNRRIPDHVWEEIKG
>Mature_210_residues
MIPSGCSKPIVVIEHLEDGLSPWILLEYRHLSGFYGSNCVVFANIPGKYHRILGRYGIPVKESIIEIVNSGIIKPGEVII
LDPASPRELTYEILSRTKYVVVGGILGDHPPKKRTRELISSRLKLIESYNIGDGQYSIDGAVYYIYYMHSNKGMNGYKYV
DGVSIRDGDRIIHLPFRYPLVEEKPFISSDLIYYILNRRIPDHVWEEIKG

Specific function: Unknown

COG id: COG2428

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6324595, Length=198, Percent_Identity=29.2929292929293, Blast_Score=92, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23957; Mature: 23957

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPSGCSKPIVVIEHLEDGLSPWILLEYRHLSGFYGSNCVVFANIPGKYHRILGRYGIPV
CCCCCCCCCEEEEEEHHCCCCCEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHCCCCH
KESIIEIVNSGIIKPGEVIILDPASPRELTYEILSRTKYVVVGGILGDHPPKKRTRELIS
HHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH
SRLKLIESYNIGDGQYSIDGAVYYIYYMHSNKGMNGYKYVDGVSIRDGDRIIHLPFRYPL
HHHHHHHHCCCCCCCEEECCEEEEEEEEECCCCCCCCEEECCCEEECCCEEEEECCCCCC
VEEKPFISSDLIYYILNRRIPDHVWEEIKG
CCCCCCCCHHHHHHHHHCCCCHHHHHHHCC
>Mature Secondary Structure
MIPSGCSKPIVVIEHLEDGLSPWILLEYRHLSGFYGSNCVVFANIPGKYHRILGRYGIPV
CCCCCCCCCEEEEEEHHCCCCCEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHCCCCH
KESIIEIVNSGIIKPGEVIILDPASPRELTYEILSRTKYVVVGGILGDHPPKKRTRELIS
HHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH
SRLKLIESYNIGDGQYSIDGAVYYIYYMHSNKGMNGYKYVDGVSIRDGDRIIHLPFRYPL
HHHHHHHHCCCCCCCEEECCEEEEEEEEECCCCCCCCEEECCCEEECCCEEEEECCCCCC
VEEKPFISSDLIYYILNRRIPDHVWEEIKG
CCCCCCCCHHHHHHHHHCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA