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The map label for this gene is 218883342

Identifier: 218883342

GI number: 218883342

Start: 26978

End: 27712

Strand: Direct

Name: 218883342

Synonym: DKAM_0028

Alternate gene names: NA

Gene position: 26978-27712 (Clockwise)

Preceding gene: 218883341

Following gene: 218883343

Centisome position: 1.98

GC content: 43.27

Gene sequence:

>735_bases
ATGCCCTCACTACAGCCGGGCGCTCTGCCGCTGAGCTACGGCGGGACTCCCATCAGCAATTTTAATTATGGCAGGGTCTT
ATATAGTTTTCAACTAGGTGGAGATATGGAGAACATAGAGGAAATACTCAACGTCATCAGGAATAGTATCGATGAGATCG
ATGGAATTCTAAGCCTTAAGGACTCTGTACGTGAAGAGGTATACAGGCTTATCAGGGAACTTACAAGGAACTCTAGCGAC
GTTGTAACATTGATCCACAGGGGGCTCATCGGTGATGCTGAGAAAAGGCTCAGCATTGCTGAAGATATTGTTAAAAAGAT
AAACGGGCTAATGAGGGAACACCCCGACATATACTATAGTGGCATGGTTTACAATGGGTTAAGCGAGTATGTTGAGGCAG
CATTATTCTATGAAGTGATAGTTAAAAACAATGTCTCGTCATGGAGACGCCTAGACGTACCATATGTTCCATATTTACAG
GGACTAGGGGATCTCATCGGGGAACTCAGGAGATATATTATTAAACTACTTGACAAAGGATCAATAGATGAGGCGGTTAA
ATACTTTAATCTCATGGAGGAGATATACATAAGCCTGAGGAAACTAGATTACCCGGATGCCCTCACGCCAGGGTTAAGAC
ATAAGGTGGATGTAGCATCCAGGCTTGTTGAAGACACTCGAATGCTTATTCTTAACACGAAAAACGCGTATATATGTGCA
CCTGGAAAAACTTGA

Upstream 100 bases:

>100_bases
ATAGAAGAATACCCGATCACGTCTGGGAAGAGATAAAGGGTTGAAATACTATAGGGGAAATCCCGCCGGGGGGATTTGAA
CCCCCGGCCACCCGGTGTCT

Downstream 100 bases:

>100_bases
AGCCCTAGTATTCAGGAATGTATCTGTTGGTGTCAAATATATTAGATTCTTCGCCAGAAATATCTAATTAGGCAGGGTGC
TTACCATACAAACCACGTGA

Product: haloacid dehalogenase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MPSLQPGALPLSYGGTPISNFNYGRVLYSFQLGGDMENIEEILNVIRNSIDEIDGILSLKDSVREEVYRLIRELTRNSSD
VVTLIHRGLIGDAEKRLSIAEDIVKKINGLMREHPDIYYSGMVYNGLSEYVEAALFYEVIVKNNVSSWRRLDVPYVPYLQ
GLGDLIGELRRYIIKLLDKGSIDEAVKYFNLMEEIYISLRKLDYPDALTPGLRHKVDVASRLVEDTRMLILNTKNAYICA
PGKT

Sequences:

>Translated_244_residues
MPSLQPGALPLSYGGTPISNFNYGRVLYSFQLGGDMENIEEILNVIRNSIDEIDGILSLKDSVREEVYRLIRELTRNSSD
VVTLIHRGLIGDAEKRLSIAEDIVKKINGLMREHPDIYYSGMVYNGLSEYVEAALFYEVIVKNNVSSWRRLDVPYVPYLQ
GLGDLIGELRRYIIKLLDKGSIDEAVKYFNLMEEIYISLRKLDYPDALTPGLRHKVDVASRLVEDTRMLILNTKNAYICA
PGKT
>Mature_243_residues
PSLQPGALPLSYGGTPISNFNYGRVLYSFQLGGDMENIEEILNVIRNSIDEIDGILSLKDSVREEVYRLIRELTRNSSDV
VTLIHRGLIGDAEKRLSIAEDIVKKINGLMREHPDIYYSGMVYNGLSEYVEAALFYEVIVKNNVSSWRRLDVPYVPYLQG
LGDLIGELRRYIIKLLDKGSIDEAVKYFNLMEEIYISLRKLDYPDALTPGLRHKVDVASRLVEDTRMLILNTKNAYICAP
GKT

Specific function: Unknown

COG id: COG2178

COG function: function code J; Predicted RNA-binding protein of the translin family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002848
- InterPro:   IPR016069
- InterPro:   IPR016068 [H]

Pfam domain/function: PF01997 Translin [H]

EC number: NA

Molecular weight: Translated: 27724; Mature: 27593

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSLQPGALPLSYGGTPISNFNYGRVLYSFQLGGDMENIEEILNVIRNSIDEIDGILSLK
CCCCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DSVREEVYRLIRELTRNSSDVVTLIHRGLIGDAEKRLSIAEDIVKKINGLMREHPDIYYS
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEC
GMVYNGLSEYVEAALFYEVIVKNNVSSWRRLDVPYVPYLQGLGDLIGELRRYIIKLLDKG
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
SIDEAVKYFNLMEEIYISLRKLDYPDALTPGLRHKVDVASRLVEDTRMLILNTKNAYICA
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCEEEEC
PGKT
CCCC
>Mature Secondary Structure 
PSLQPGALPLSYGGTPISNFNYGRVLYSFQLGGDMENIEEILNVIRNSIDEIDGILSLK
CCCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DSVREEVYRLIRELTRNSSDVVTLIHRGLIGDAEKRLSIAEDIVKKINGLMREHPDIYYS
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEC
GMVYNGLSEYVEAALFYEVIVKNNVSSWRRLDVPYVPYLQGLGDLIGELRRYIIKLLDKG
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
SIDEAVKYFNLMEEIYISLRKLDYPDALTPGLRHKVDVASRLVEDTRMLILNTKNAYICA
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCEEEEC
PGKT
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]