Click here to switch to the map view.

The map label for this gene is 218883329

Identifier: 218883329

GI number: 218883329

Start: 11871

End: 12983

Strand: Reverse

Name: 218883329

Synonym: DKAM_0015

Alternate gene names: NA

Gene position: 12983-11871 (Counterclockwise)

Preceding gene: 218883330

Following gene: 218883327

Centisome position: 0.95

GC content: 44.2

Gene sequence:

>1113_bases
ATGGAGGCTAAAACACCAGAGGAAAAGATGAAGGCACTAGAGGACTTCTTATCCAGTGTGCCCAAGCATAAGGGCACAGA
GAAACTAAGACTTTGGGCGACTAGAAGACTGGCTGAACTCAGGGAAGAGATTGAGGAGAAAAAGAAAAGAAAGACCGGTA
GAGGCGTCTCCTTCTTCATCGAGAAGGAGGGGGATGTCCAAGTAGTTGTTGTGGGTCCCCCTAACACTGGTAAAAGCATG
CTGGTTAATAGGTTAACCGGGGCTAGAACCATTATTGCTGACTACCCTTACTCCACTACGTATCCGGTACCAGGTATGCT
TAAATATAGGGATATATACATACAATTAATTGACACCCCTCCATTAAGCAGGGACAGTGTTTTCACGAATAGGGTTATCG
GCCTCGCTAGAAACGCTGATGGCCTTCTAATAATTCTGGATGCAACAATGGATCCCGGGGCTGAATTCAACGAGGTTAAG
GAAATACTTAGGGAGTACGGTATAATACTTTCAAAGCCAGCCGGTAGAGTAGTTATCGAGGTATCCAGGAGTGGAAAACA
TGGGTTAAGGTTTACGTTGATGGGGAGATTACTCAATGCAACACTTGATGATGTACGTAAGCTACTCGAGGAGTACAGGA
TATATAATGCACATGTAAAGATATATGGAGAAGTCACATTAGATGATGTGGAGCAGGCATTATTCGAGAATACAGCCTAT
AAGCCCGCTATAGTATATATTAATAAAGCCGACCTGGTGAAAGACATCGATACCGTTATAAAGGCTTTCACGAGTTCATA
TAATCTACCTATATTATACGGCTCCGCTATGACCGGGCTAGGCCTCGACAAAATAGGTGAAGTATTATTCGATCAGCTTG
AACTAATCCGGGTATACACCAAGTCGCCTAATACACCTCCATCCGAGAAGCCGCTGGTACTTCGAAAAGGCGCTACTATA
CGCGATGTCGCTGAAAGCATACATAGGGACTTCGTGAAGAACTTTCTCTACGCAAAGATATGGGGCAAATCTGTTAAATA
CCCTGGTGAAAAAGTAGGTCTTGAACACATCGTTGAGGACGGGGATATCGTGGAAATACATATCCGCGGCTAA

Upstream 100 bases:

>100_bases
CATGGTAAAAAGGAGGGATCCTTACTAGACTATATTAGAAGGGGAGTAACCTATGGTAACCAACCTACCAGCGGAAGCAA
AGGCTAAATGGCTAAAGGTA

Downstream 100 bases:

>100_bases
CTAATCCTTAATTCGAGAGCTGAAGAACATCACTCATTAGCCATCGCATTCCCTAAGAGGTATGTTGAGCCTGGTAAGTA
GCGTCGATAACGCATTGAGA

Product: GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MEAKTPEEKMKALEDFLSSVPKHKGTEKLRLWATRRLAELREEIEEKKKRKTGRGVSFFIEKEGDVQVVVVGPPNTGKSM
LVNRLTGARTIIADYPYSTTYPVPGMLKYRDIYIQLIDTPPLSRDSVFTNRVIGLARNADGLLIILDATMDPGAEFNEVK
EILREYGIILSKPAGRVVIEVSRSGKHGLRFTLMGRLLNATLDDVRKLLEEYRIYNAHVKIYGEVTLDDVEQALFENTAY
KPAIVYINKADLVKDIDTVIKAFTSSYNLPILYGSAMTGLGLDKIGEVLFDQLELIRVYTKSPNTPPSEKPLVLRKGATI
RDVAESIHRDFVKNFLYAKIWGKSVKYPGEKVGLEHIVEDGDIVEIHIRG

Sequences:

>Translated_370_residues
MEAKTPEEKMKALEDFLSSVPKHKGTEKLRLWATRRLAELREEIEEKKKRKTGRGVSFFIEKEGDVQVVVVGPPNTGKSM
LVNRLTGARTIIADYPYSTTYPVPGMLKYRDIYIQLIDTPPLSRDSVFTNRVIGLARNADGLLIILDATMDPGAEFNEVK
EILREYGIILSKPAGRVVIEVSRSGKHGLRFTLMGRLLNATLDDVRKLLEEYRIYNAHVKIYGEVTLDDVEQALFENTAY
KPAIVYINKADLVKDIDTVIKAFTSSYNLPILYGSAMTGLGLDKIGEVLFDQLELIRVYTKSPNTPPSEKPLVLRKGATI
RDVAESIHRDFVKNFLYAKIWGKSVKYPGEKVGLEHIVEDGDIVEIHIRG
>Mature_370_residues
MEAKTPEEKMKALEDFLSSVPKHKGTEKLRLWATRRLAELREEIEEKKKRKTGRGVSFFIEKEGDVQVVVVGPPNTGKSM
LVNRLTGARTIIADYPYSTTYPVPGMLKYRDIYIQLIDTPPLSRDSVFTNRVIGLARNADGLLIILDATMDPGAEFNEVK
EILREYGIILSKPAGRVVIEVSRSGKHGLRFTLMGRLLNATLDDVRKLLEEYRIYNAHVKIYGEVTLDDVEQALFENTAY
KPAIVYINKADLVKDIDTVIKAFTSSYNLPILYGSAMTGLGLDKIGEVLFDQLELIRVYTKSPNTPPSEKPLVLRKGATI
RDVAESIHRDFVKNFLYAKIWGKSVKYPGEKVGLEHIVEDGDIVEIHIRG

Specific function: Unknown

COG id: COG1163

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI4557537, Length=366, Percent_Identity=29.2349726775956, Blast_Score=161, Evalue=9e-40,
Organism=Homo sapiens, GI4758796, Length=368, Percent_Identity=32.6086956521739, Blast_Score=158, Evalue=8e-39,
Organism=Caenorhabditis elegans, GI71981008, Length=366, Percent_Identity=29.5081967213115, Blast_Score=162, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17555344, Length=365, Percent_Identity=30.4109589041096, Blast_Score=147, Evalue=7e-36,
Organism=Saccharomyces cerevisiae, GI6321612, Length=369, Percent_Identity=32.520325203252, Blast_Score=165, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6319281, Length=371, Percent_Identity=32.0754716981132, Blast_Score=155, Evalue=1e-38,
Organism=Drosophila melanogaster, GI21356473, Length=366, Percent_Identity=31.1475409836066, Blast_Score=176, Evalue=2e-44,
Organism=Drosophila melanogaster, GI17981711, Length=368, Percent_Identity=32.0652173913043, Blast_Score=162, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006074
- InterPro:   IPR006073
- InterPro:   IPR002917
- InterPro:   IPR005225
- InterPro:   IPR004095 [H]

Pfam domain/function: PF01926 MMR_HSR1; PF02824 TGS [H]

EC number: NA

Molecular weight: Translated: 41696; Mature: 41696

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAKTPEEKMKALEDFLSSVPKHKGTEKLRLWATRRLAELREEIEEKKKRKTGRGVSFFI
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
EKEGDVQVVVVGPPNTGKSMLVNRLTGARTIIADYPYSTTYPVPGMLKYRDIYIQLIDTP
ECCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEEEEEECCC
PLSRDSVFTNRVIGLARNADGLLIILDATMDPGAEFNEVKEILREYGIILSKPAGRVVIE
CCCCCCHHHHHHHEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCEEEEE
VSRSGKHGLRFTLMGRLLNATLDDVRKLLEEYRIYNAHVKIYGEVTLDDVEQALFENTAY
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEHHHHHHHHHHCCCC
KPAIVYINKADLVKDIDTVIKAFTSSYNLPILYGSAMTGLGLDKIGEVLFDQLELIRVYT
CCEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHEE
KSPNTPPSEKPLVLRKGATIRDVAESIHRDFVKNFLYAKIWGKSVKYPGEKVGLEHIVED
CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCHHHHCCC
GDIVEIHIRG
CCEEEEEECC
>Mature Secondary Structure
MEAKTPEEKMKALEDFLSSVPKHKGTEKLRLWATRRLAELREEIEEKKKRKTGRGVSFFI
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
EKEGDVQVVVVGPPNTGKSMLVNRLTGARTIIADYPYSTTYPVPGMLKYRDIYIQLIDTP
ECCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEEEEEECCC
PLSRDSVFTNRVIGLARNADGLLIILDATMDPGAEFNEVKEILREYGIILSKPAGRVVIE
CCCCCCHHHHHHHEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCEEEEE
VSRSGKHGLRFTLMGRLLNATLDDVRKLLEEYRIYNAHVKIYGEVTLDDVEQALFENTAY
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEHHHHHHHHHHCCCC
KPAIVYINKADLVKDIDTVIKAFTSSYNLPILYGSAMTGLGLDKIGEVLFDQLELIRVYT
CCEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHEE
KSPNTPPSEKPLVLRKGATIRDVAESIHRDFVKNFLYAKIWGKSVKYPGEKVGLEHIVED
CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCHHHHCCC
GDIVEIHIRG
CCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]