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The map label for this gene is yurY [H]

Identifier: 218883321

GI number: 218883321

Start: 4883

End: 5617

Strand: Reverse

Name: yurY [H]

Synonym: DKAM_0007

Alternate gene names: 218883321

Gene position: 5617-4883 (Counterclockwise)

Preceding gene: 218883325

Following gene: 218883320

Centisome position: 0.41

GC content: 45.03

Gene sequence:

>735_bases
ATGCTCGAGGCATTGAACCTAGTGGTCGAGGTAAACAATAAAATAGTCATTAACGATGTAAGCATTAAGGTGGAAACAGG
AAGCATCACTGCCCTAATGGGTCCTAATGGTAGTGGCAAAACATCCCTAGTATACGCGATAATGGGGCATCCATCCTATA
GGATCCTTAAAGGGAGTATATTAATAGATGGCTTAGATTACACATTTAAGCCTACACACGAGAGAGCTCTAGCCGGCCTA
TTTCTCGTGTTTCAAAACCCAATTGAGCTCCCAGGTGTATCGCTTGAATCATTAATAAGGAGTGCAGTAAATAAGAGGCT
GGGTAAAAACGACTTATTGGAGCACGTACCAGGATTACCCGATAGAATACTCGGGGAGGCAAAGCTCATCGGGTTGAAAG
AGGAGCTCGTCACTAGGGATTTAAACATTGGTTTCAGTGGTGGCGAGAGAAAAAGAAGCGAGATACTTCAAGCCAGGGTT
CTAAAGCCGAAGTACTTGATCCTCGACGAGCCCGATAGCGGTCTTGATGTCGACGGGGTTCGAATAATTGCCGACTACAT
TAAGGAGGTAGCATACTCTAATGGCGGGGTGCTACTTGTAACACATAACCCTACCCTACTAAGTTACGTTGAACCCAGCA
TCATCTATGTCATGCTGAATGGAAGGATAGTTGCGGAGGGCGGGTTAGAAATAGCTGATAAAATAGCTAGGGAGGGATAC
AACTGGTTGAGGTAA

Upstream 100 bases:

>100_bases
GTTAGTGGGATAATAACATTATAAAATTTATTTATTAAAATCGATGTATCCCACTAATTTTTAAGGCCTTGAAACATGAA
AATAATAACAGGGATTGGAA

Downstream 100 bases:

>100_bases
AGTAGTATGGCTATCGAGCTATCTAAGAGTCTTGAACACCATGAGATCGAGCCTGTTGAATACAGAAAGGAGATAGAGAT
CAAGGGCAGACTATCTAGAA

Product: FeS assembly ATPase SufC

Products: NA

Alternate protein names: VEG296 [H]

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MLEALNLVVEVNNKIVINDVSIKVETGSITALMGPNGSGKTSLVYAIMGHPSYRILKGSILIDGLDYTFKPTHERALAGL
FLVFQNPIELPGVSLESLIRSAVNKRLGKNDLLEHVPGLPDRILGEAKLIGLKEELVTRDLNIGFSGGERKRSEILQARV
LKPKYLILDEPDSGLDVDGVRIIADYIKEVAYSNGGVLLVTHNPTLLSYVEPSIIYVMLNGRIVAEGGLEIADKIAREGY
NWLR

Sequences:

>Translated_244_residues
MLEALNLVVEVNNKIVINDVSIKVETGSITALMGPNGSGKTSLVYAIMGHPSYRILKGSILIDGLDYTFKPTHERALAGL
FLVFQNPIELPGVSLESLIRSAVNKRLGKNDLLEHVPGLPDRILGEAKLIGLKEELVTRDLNIGFSGGERKRSEILQARV
LKPKYLILDEPDSGLDVDGVRIIADYIKEVAYSNGGVLLVTHNPTLLSYVEPSIIYVMLNGRIVAEGGLEIADKIAREGY
NWLR
>Mature_244_residues
MLEALNLVVEVNNKIVINDVSIKVETGSITALMGPNGSGKTSLVYAIMGHPSYRILKGSILIDGLDYTFKPTHERALAGL
FLVFQNPIELPGVSLESLIRSAVNKRLGKNDLLEHVPGLPDRILGEAKLIGLKEELVTRDLNIGFSGGERKRSEILQARV
LKPKYLILDEPDSGLDVDGVRIIADYIKEVAYSNGGVLLVTHNPTLLSYVEPSIIYVMLNGRIVAEGGLEIADKIAREGY
NWLR

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI46592915, Length=217, Percent_Identity=26.7281105990783, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI46592898, Length=217, Percent_Identity=26.7281105990783, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI46592964, Length=217, Percent_Identity=26.7281105990783, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI46592956, Length=217, Percent_Identity=26.7281105990783, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI46592978, Length=217, Percent_Identity=26.7281105990783, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI46592971, Length=217, Percent_Identity=26.7281105990783, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1787972, Length=254, Percent_Identity=35.4330708661417, Blast_Score=177, Evalue=8e-46,
Organism=Escherichia coli, GI1789593, Length=234, Percent_Identity=31.1965811965812, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI87081709, Length=232, Percent_Identity=29.3103448275862, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1788225, Length=233, Percent_Identity=30.0429184549356, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788506, Length=226, Percent_Identity=29.646017699115, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787029, Length=235, Percent_Identity=26.3829787234043, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787089, Length=236, Percent_Identity=26.6949152542373, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI87081791, Length=260, Percent_Identity=26.1538461538462, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1787759, Length=229, Percent_Identity=28.3842794759825, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787370, Length=215, Percent_Identity=28.3720930232558, Blast_Score=64, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17543740, Length=196, Percent_Identity=26.530612244898, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6322177, Length=220, Percent_Identity=30.4545454545455, Blast_Score=74, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6324585, Length=202, Percent_Identity=29.7029702970297, Blast_Score=70, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6324498, Length=252, Percent_Identity=22.6190476190476, Blast_Score=65, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6319856, Length=237, Percent_Identity=28.2700421940928, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI161076682, Length=214, Percent_Identity=28.5046728971963, Blast_Score=88, Evalue=6e-18,
Organism=Drosophila melanogaster, GI161076684, Length=214, Percent_Identity=28.5046728971963, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24581617, Length=214, Percent_Identity=28.5046728971963, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24581615, Length=214, Percent_Identity=28.5046728971963, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI85816269, Length=217, Percent_Identity=26.2672811059908, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24580553, Length=217, Percent_Identity=26.2672811059908, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI85724864, Length=217, Percent_Identity=26.2672811059908, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24580555, Length=217, Percent_Identity=26.2672811059908, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI19920532, Length=222, Percent_Identity=24.7747747747748, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24580930, Length=222, Percent_Identity=24.7747747747748, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI28574744, Length=223, Percent_Identity=24.6636771300448, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28574533, Length=218, Percent_Identity=25.2293577981651, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24662800, Length=215, Percent_Identity=27.906976744186, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 26727; Mature: 26727

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS00063 ALDOKETO_REDUCTASE_3 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEALNLVVEVNNKIVINDVSIKVETGSITALMGPNGSGKTSLVYAIMGHPSYRILKGSI
CCCCEEEEEEECCEEEEEEEEEEEECCEEEEEECCCCCCCCEEEEEEECCCCEEEEEEEE
LIDGLDYTFKPTHERALAGLFLVFQNPIELPGVSLESLIRSAVNKRLGKNDLLEHVPGLP
EEECCCCCCCCCHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCC
DRILGEAKLIGLKEELVTRDLNIGFSGGERKRSEILQARVLKPKYLILDEPDSGLDVDGV
HHHCCCHHEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHH
RIIADYIKEVAYSNGGVLLVTHNPTLLSYVEPSIIYVMLNGRIVAEGGLEIADKIAREGY
HHHHHHHHHHHHCCCCEEEEECCCCEEEECCCEEEEEEECCEEEECCCHHHHHHHHHCCC
NWLR
CCCC
>Mature Secondary Structure
MLEALNLVVEVNNKIVINDVSIKVETGSITALMGPNGSGKTSLVYAIMGHPSYRILKGSI
CCCCEEEEEEECCEEEEEEEEEEEECCEEEEEECCCCCCCCEEEEEEECCCCEEEEEEEE
LIDGLDYTFKPTHERALAGLFLVFQNPIELPGVSLESLIRSAVNKRLGKNDLLEHVPGLP
EEECCCCCCCCCHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCC
DRILGEAKLIGLKEELVTRDLNIGFSGGERKRSEILQARVLKPKYLILDEPDSGLDVDGV
HHHCCCHHEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHH
RIIADYIKEVAYSNGGVLLVTHNPTLLSYVEPSIIYVMLNGRIVAEGGLEIADKIAREGY
HHHHHHHHHHHHCCCCEEEEECCCCEEEECCCEEEEEEECCEEEECCCHHHHHHHHHCCC
NWLR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]