Click here to switch to the map view.

The map label for this gene is 218532644

Identifier: 218532644

GI number: 218532644

Start: 5048714

End: 5049931

Strand: Reverse

Name: 218532644

Synonym: Mchl_4758

Alternate gene names: NA

Gene position: 5049931-5048714 (Counterclockwise)

Preceding gene: 218532645

Following gene: 218532642

Centisome position: 87.4

GC content: 64.53

Gene sequence:

>1218_bases
ATGCCGGGACGGCTCCCAAGGTTTTGTGTCGAAGATGTGGATCGGCACGGCAACGTACGCGTCTACCTGCGTCGCAAAGA
CTGGCCAAAGGTTCGCTTGCCCGGCGTACCGTGGACGGAGCCGTTCATGGAGGCTTACCGGGCAGCGCTCAATGGTACGT
CCGAGGACAAGCCGCGGGACCGGTACGCAACGTTGCCCGACACGTGGAAGTGGCTCTGCCAGCAGTACGTCACATCGGCC
AGGTTCAAAACGCTCGACCCCGTGACGCAGCGGCGGCGGCGCGCGCTCCTCGAAGCGACTTACGATGAGCCAACCAAGCC
GGGGGCGAAGACGGTCTTCGCCGACTTTCCGCTCGCTCGCCTGACGCCGGCCGCGATCCGGATCCTGCGCGACCGCAAGG
CCGATGTGCCTGACGGGGCAAACAACACGGTCAAGGCGATCCGGGCGACCTTCAAATGGGCCGTCCACCCCGAGGTTGCG
CTCGCATCGCACAATCCGGCTCGCGATGTGGGCTACATCGCAACGGCTTCGGAGGGGTTCCACACATGGAGCGTGGATGA
GGTGAAGCGCTTCGTCGCGCGCCACCCGCTCGGCAGCCGCGCCTATCTCGCCCTGTGCCTTCTACTCTTTGCCGGCGGCC
GCCGCTCTGATGCCGTTCTCTTTGGGCGCCAGCACCTGCAGGGTGCGTGGCTGCGCTACACCCAGCACAAGGGCCGCAAC
GCGAAACCTATGACGCTGGAGGTGCCGGTGCTGCCAGCCCTGCGCGCGGCCATTGAAGCGTGCCCGAGTCAGAATCTCGC
CTTCCTCGTCACCGAGCGCGGCAAGCCGTTCACGTCGAACGGCTTCGGAAACTGGTTCAAGGATCGCTGCCGAGAGGCCG
GCCTACTGCACTGCTCTGCTCACGGCCTGCGGAAGGCTGGGGCTACGCTCGCCGCCGAGAACGGCGCGACCGAGCGGCAG
CTCATGGCGATGTTTGGTTGGCGCACGTCGAAGATGGCAGAGCACTACACCCGCAAGGCCGAGCAGAAGAGGCTCGCCGG
GGGCGCCATGCACCTCATCAACTTCGATCGAAGCGGGGAGGGGAGTGTCCCACTCTTCGCAGCCATCAAAGCCGGTGGGA
CTATCAGCGGAGAAACCGCAACGAAATCAACGTCGATTTCTGCGATTGGTGCCCAGGAAAGGACTCGAACCTTCACCTCT
TGCAAGACTGGTACCTGA

Upstream 100 bases:

>100_bases
GTGAACTTCCTGATGAAGACTCTGGCGTTTGCGGACCGCGAGACGGCGGACCGCGGGACGATGGATGGGGGGATCTGGGG
GTATGAACAAAGAGGTTGAT

Downstream 100 bases:

>100_bases
AACCAGCGCGTCTACCAATTCCGCCACCTGGGCGCCGGACCGTTGCCGGTCGGCGATGGGGTTCGTTTAGGGGGCGGCGG
CGAAGGCGTCAATCGCTGTT

Product: integrase family protein

Products: NA

Alternate protein names: Integrase Family Protein; Phage Integrase; Phage-Related Integrase/Recombinase; Integrase/Recombinase; Integrase; Phage Integrase/Recombinase; Integrase/Recombinase Protein; Phage-Related Integrase; Phage Related Integrase; Tyrosine Recombinase; Site-Specific Recombinase Phage Integrase Family Protein

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MPGRLPRFCVEDVDRHGNVRVYLRRKDWPKVRLPGVPWTEPFMEAYRAALNGTSEDKPRDRYATLPDTWKWLCQQYVTSA
RFKTLDPVTQRRRRALLEATYDEPTKPGAKTVFADFPLARLTPAAIRILRDRKADVPDGANNTVKAIRATFKWAVHPEVA
LASHNPARDVGYIATASEGFHTWSVDEVKRFVARHPLGSRAYLALCLLLFAGGRRSDAVLFGRQHLQGAWLRYTQHKGRN
AKPMTLEVPVLPALRAAIEACPSQNLAFLVTERGKPFTSNGFGNWFKDRCREAGLLHCSAHGLRKAGATLAAENGATERQ
LMAMFGWRTSKMAEHYTRKAEQKRLAGGAMHLINFDRSGEGSVPLFAAIKAGGTISGETATKSTSISAIGAQERTRTFTS
CKTGT

Sequences:

>Translated_405_residues
MPGRLPRFCVEDVDRHGNVRVYLRRKDWPKVRLPGVPWTEPFMEAYRAALNGTSEDKPRDRYATLPDTWKWLCQQYVTSA
RFKTLDPVTQRRRRALLEATYDEPTKPGAKTVFADFPLARLTPAAIRILRDRKADVPDGANNTVKAIRATFKWAVHPEVA
LASHNPARDVGYIATASEGFHTWSVDEVKRFVARHPLGSRAYLALCLLLFAGGRRSDAVLFGRQHLQGAWLRYTQHKGRN
AKPMTLEVPVLPALRAAIEACPSQNLAFLVTERGKPFTSNGFGNWFKDRCREAGLLHCSAHGLRKAGATLAAENGATERQ
LMAMFGWRTSKMAEHYTRKAEQKRLAGGAMHLINFDRSGEGSVPLFAAIKAGGTISGETATKSTSISAIGAQERTRTFTS
CKTGT
>Mature_404_residues
PGRLPRFCVEDVDRHGNVRVYLRRKDWPKVRLPGVPWTEPFMEAYRAALNGTSEDKPRDRYATLPDTWKWLCQQYVTSAR
FKTLDPVTQRRRRALLEATYDEPTKPGAKTVFADFPLARLTPAAIRILRDRKADVPDGANNTVKAIRATFKWAVHPEVAL
ASHNPARDVGYIATASEGFHTWSVDEVKRFVARHPLGSRAYLALCLLLFAGGRRSDAVLFGRQHLQGAWLRYTQHKGRNA
KPMTLEVPVLPALRAAIEACPSQNLAFLVTERGKPFTSNGFGNWFKDRCREAGLLHCSAHGLRKAGATLAAENGATERQL
MAMFGWRTSKMAEHYTRKAEQKRLAGGAMHLINFDRSGEGSVPLFAAIKAGGTISGETATKSTSISAIGAQERTRTFTSC
KTGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45034; Mature: 44903

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGRLPRFCVEDVDRHGNVRVYLRRKDWPKVRLPGVPWTEPFMEAYRAALNGTSEDKPRD
CCCCCCHHHHHHHCCCCCEEEEEEECCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCC
RYATLPDTWKWLCQQYVTSARFKTLDPVTQRRRRALLEATYDEPTKPGAKTVFADFPLAR
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHH
LTPAAIRILRDRKADVPDGANNTVKAIRATFKWAVHPEVALASHNPARDVGYIATASEGF
HCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHEECCCCEEECCCCCCCCCCEEEECCCCC
HTWSVDEVKRFVARHPLGSRAYLALCLLLFAGGRRSDAVLFGRQHLQGAWLRYTQHKGRN
EECCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHCCCC
AKPMTLEVPVLPALRAAIEACPSQNLAFLVTERGKPFTSNGFGNWFKDRCREAGLLHCSA
CCCCEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCEEEECH
HGLRKAGATLAAENGATERQLMAMFGWRTSKMAEHYTRKAEQKRLAGGAMHLINFDRSGE
HHHHHHCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
GSVPLFAAIKAGGTISGETATKSTSISAIGAQERTRTFTSCKTGT
CCCCEEEEEECCCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCC
>Mature Secondary Structure 
PGRLPRFCVEDVDRHGNVRVYLRRKDWPKVRLPGVPWTEPFMEAYRAALNGTSEDKPRD
CCCCCHHHHHHHCCCCCEEEEEEECCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCC
RYATLPDTWKWLCQQYVTSARFKTLDPVTQRRRRALLEATYDEPTKPGAKTVFADFPLAR
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHH
LTPAAIRILRDRKADVPDGANNTVKAIRATFKWAVHPEVALASHNPARDVGYIATASEGF
HCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHEECCCCEEECCCCCCCCCCEEEECCCCC
HTWSVDEVKRFVARHPLGSRAYLALCLLLFAGGRRSDAVLFGRQHLQGAWLRYTQHKGRN
EECCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHCCCC
AKPMTLEVPVLPALRAAIEACPSQNLAFLVTERGKPFTSNGFGNWFKDRCREAGLLHCSA
CCCCEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCEEEECH
HGLRKAGATLAAENGATERQLMAMFGWRTSKMAEHYTRKAEQKRLAGGAMHLINFDRSGE
HHHHHHCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
GSVPLFAAIKAGGTISGETATKSTSISAIGAQERTRTFTSCKTGT
CCCCEEEEEECCCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA