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The map label for this gene is cyoA [H]

Identifier: 218532592

GI number: 218532592

Start: 4987005

End: 4988168

Strand: Reverse

Name: cyoA [H]

Synonym: Mchl_4706

Alternate gene names: 218532592

Gene position: 4988168-4987005 (Counterclockwise)

Preceding gene: 218532593

Following gene: 218532591

Centisome position: 86.33

GC content: 66.07

Gene sequence:

>1164_bases
ATGGAACGAAGATTCGTGGCCATGACCGCCGACCGTTCAATGAGAGCCCGTGCCGGGGCCGGCTCCGCGGGCCGGATCCT
GCGGGGTCTCGTCCTCCTGCCGCTGTTCGGCCTGCTCGCCGGCTGCAACCTCGTGGTGATGCAGCCCTCCGGCGACATCG
CCATGCAGCAGCGCAACCTCGTCCTCGCCTCGACGGGGCTGATGCTGCTCATCATCATCCCGGTGATCGTGCTGACCCTG
CTGTTCGCGTGGCGCTACCGCGCATCGAACACGGCGGCCCGCCACGACCCCGACTGGGACCACTCGACCGGGCTCGAAGT
GGTGATCTGGACCGCGCCGCTGATGATCATCATCGCGCTCGGCGCGCTGACCTGGATCAGCACCCACACCCTCGACCCGT
TCCGGCCGCTCTCGCGCATCGAGCCAGGCAAGCCGGTCGCGGCGGAGGTGAAGCCGCTGGAGGTGGAGGTCGTCGCCCTC
GATTGGAAATGGCTGTTCTTCTACCCCGAATACAACGTCGCGACGGTCAACGAGCTGGCCGCGCCGGTGAACCGGCCGAT
CACCTTCAAGATCACCGCCTCCTCGGTGATGAACGCCTTCTACATCCCCGCGCTCGCCGGCATGATCTACGCGATGCCCG
GCATGCAGACGCAACTCCATGCCGTGATCAACAAGCCGGGCGCCTATGACGGGCTGTCGTCGCACTACAGCGGCACCGGC
TTCTCGCGCATGACGTTCAAGTTCCACGGGCTCGACGGCGACGGCTTCGACCAGTGGATTGCCAAAGTGAAGCAGCAGGG
TTCGGAATTGAGCCGTGATGCCTATCTCGAACTCGAGCGCCCGAGCGAGCGCGTTCCCGTCACCTACTACGCCTCGTTTG
CCGACGGCCTCTTCAGCAAGATCCTCGGCATGTGCGCCGTGCCCGGCAAGATGTGCATGCACGAGATGATGACCATCGAC
GCCAAGGGCGGCGCCGGCAAGGAAAGCCAAGAGAACGCCGAGCGGCTCCAGTACGACAATCGCCATGTGCAGCGCGGCGA
CGAAGCCCCGGGGGCGACGACCCCGGCCTCGCACCGCGCGCCCAAGAGCGAAACGCCCGACGGCGATAAGACCCACGAGG
GGAGCGGCCAAGGCCACTCCGCTCCCGACCAGACCAACAACTGA

Upstream 100 bases:

>100_bases
CAACAAGGTCCCGGAGAGGCCGAGCCGACACCGTCGGCTCGGCCTCTCCGGAGAGAAACGAACCGCCGCCACGCGGGAAG
TCACCCGCGCGGCCCTTGCG

Downstream 100 bases:

>100_bases
TCCGTCGCCGCCTCAGGATTTACGGACGAGTTTCAACCCATGTTCGCAAACACGGACCTGCAGCACCTGCTGTTCGGGCG
CCTCTCCCTGGAGGACATCC

Product: ubiquinol oxidase subunit II

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MERRFVAMTADRSMRARAGAGSAGRILRGLVLLPLFGLLAGCNLVVMQPSGDIAMQQRNLVLASTGLMLLIIIPVIVLTL
LFAWRYRASNTAARHDPDWDHSTGLEVVIWTAPLMIIIALGALTWISTHTLDPFRPLSRIEPGKPVAAEVKPLEVEVVAL
DWKWLFFYPEYNVATVNELAAPVNRPITFKITASSVMNAFYIPALAGMIYAMPGMQTQLHAVINKPGAYDGLSSHYSGTG
FSRMTFKFHGLDGDGFDQWIAKVKQQGSELSRDAYLELERPSERVPVTYYASFADGLFSKILGMCAVPGKMCMHEMMTID
AKGGAGKESQENAERLQYDNRHVQRGDEAPGATTPASHRAPKSETPDGDKTHEGSGQGHSAPDQTNN

Sequences:

>Translated_387_residues
MERRFVAMTADRSMRARAGAGSAGRILRGLVLLPLFGLLAGCNLVVMQPSGDIAMQQRNLVLASTGLMLLIIIPVIVLTL
LFAWRYRASNTAARHDPDWDHSTGLEVVIWTAPLMIIIALGALTWISTHTLDPFRPLSRIEPGKPVAAEVKPLEVEVVAL
DWKWLFFYPEYNVATVNELAAPVNRPITFKITASSVMNAFYIPALAGMIYAMPGMQTQLHAVINKPGAYDGLSSHYSGTG
FSRMTFKFHGLDGDGFDQWIAKVKQQGSELSRDAYLELERPSERVPVTYYASFADGLFSKILGMCAVPGKMCMHEMMTID
AKGGAGKESQENAERLQYDNRHVQRGDEAPGATTPASHRAPKSETPDGDKTHEGSGQGHSAPDQTNN
>Mature_387_residues
MERRFVAMTADRSMRARAGAGSAGRILRGLVLLPLFGLLAGCNLVVMQPSGDIAMQQRNLVLASTGLMLLIIIPVIVLTL
LFAWRYRASNTAARHDPDWDHSTGLEVVIWTAPLMIIIALGALTWISTHTLDPFRPLSRIEPGKPVAAEVKPLEVEVVAL
DWKWLFFYPEYNVATVNELAAPVNRPITFKITASSVMNAFYIPALAGMIYAMPGMQTQLHAVINKPGAYDGLSSHYSGTG
FSRMTFKFHGLDGDGFDQWIAKVKQQGSELSRDAYLELERPSERVPVTYYASFADGLFSKILGMCAVPGKMCMHEMMTID
AKGGAGKESQENAERLQYDNRHVQRGDEAPGATTPASHRAPKSETPDGDKTHEGSGQGHSAPDQTNN

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=288, Percent_Identity=47.5694444444444, Blast_Score=283, Evalue=1e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 42360; Mature: 42360

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERRFVAMTADRSMRARAGAGSAGRILRGLVLLPLFGLLAGCNLVVMQPSGDIAMQQRNL
CCCEEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEHHCCE
VLASTGLMLLIIIPVIVLTLLFAWRYRASNTAARHDPDWDHSTGLEVVIWTAPLMIIIAL
EEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHH
GALTWISTHTLDPFRPLSRIEPGKPVAAEVKPLEVEVVALDWKWLFFYPEYNVATVNELA
HHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCCCHHHHHH
APVNRPITFKITASSVMNAFYIPALAGMIYAMPGMQTQLHAVINKPGAYDGLSSHYSGTG
HCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
FSRMTFKFHGLDGDGFDQWIAKVKQQGSELSRDAYLELERPSERVPVTYYASFADGLFSK
CEEEEEEEECCCCCCHHHHHHHHHHCCHHCCCCCEEEECCCCCCCCEEEEHHHHHHHHHH
ILGMCAVPGKMCMHEMMTIDAKGGAGKESQENAERLQYDNRHVQRGDEAPGATTPASHRA
HHHHHCCCHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCC
PKSETPDGDKTHEGSGQGHSAPDQTNN
CCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MERRFVAMTADRSMRARAGAGSAGRILRGLVLLPLFGLLAGCNLVVMQPSGDIAMQQRNL
CCCEEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEHHCCE
VLASTGLMLLIIIPVIVLTLLFAWRYRASNTAARHDPDWDHSTGLEVVIWTAPLMIIIAL
EEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHH
GALTWISTHTLDPFRPLSRIEPGKPVAAEVKPLEVEVVALDWKWLFFYPEYNVATVNELA
HHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCCCHHHHHH
APVNRPITFKITASSVMNAFYIPALAGMIYAMPGMQTQLHAVINKPGAYDGLSSHYSGTG
HCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
FSRMTFKFHGLDGDGFDQWIAKVKQQGSELSRDAYLELERPSERVPVTYYASFADGLFSK
CEEEEEEEECCCCCCHHHHHHHHHHCCHHCCCCCEEEECCCCCCCCEEEEHHHHHHHHHH
ILGMCAVPGKMCMHEMMTIDAKGGAGKESQENAERLQYDNRHVQRGDEAPGATTPASHRA
HHHHHCCCHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCC
PKSETPDGDKTHEGSGQGHSAPDQTNN
CCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]