| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is yhjE [H]
Identifier: 218532593
GI number: 218532593
Start: 4988363
End: 4989697
Strand: Reverse
Name: yhjE [H]
Synonym: Mchl_4707
Alternate gene names: 218532593
Gene position: 4989697-4988363 (Counterclockwise)
Preceding gene: 218532594
Following gene: 218532592
Centisome position: 86.36
GC content: 68.46
Gene sequence:
>1335_bases ATGACCACCGACCACGCCACGGCCAATTCCCACCCGCTCGAGCGCGACGCGCAAGTGGCCATGAGCCACCACGACGTCAG CCCCAACGACATCGCGCTCGGCGTGGTGATCGGGCGGGCGTCGGAATATTTCGACTTCTTCGTGTTCGGCATCGCCTCGG TGCTGGTGTTCCCGAAGGTGTTCTTCCCCTTCGCCGCCCCCCTCACGGGCACGCTCTACTCGTTCGCCATCTTCGCGCTG GCCTTCATCGCCCGCCCGCTCGGGTCGGTCTTCTTCATGTGGGTCCACAAGCGGCACGGACGCGGGGTGAAGCTCACCCT CGCCCTGTTCCTGCTCGGCGGCTCGACCGCGGCGATCAGCTTCCTGCCGAGCTACAACTCGATCGGCATCGTCGCCATCG AGCTGCTCGCGGTGCTGCGGGTCGCGCAGGGCTTCGCGCTCGGCGGCGCCTGGGACGGCATGGCCTCGCTGCTCGCCCTC AACGCGCCGCGGGAGCGCCGCGGCTGGTACGCGATGATCCCGCAGCTCGGCGCACCGTTCGGCTTCATGGTGGCGAGCGC GCTGTTCGCGTTCTTCTCCGTCAACCTGACCCCTGAGGATTTCACCGACTGGGGCTGGCGCTTCCCGTTCTTCTGCGCCT TCACCATCAACGTCGTGGCCCTGTTCGCGCGGCTCCGGCTCGTGGCCACCCCCGAATTCACCCGGCTTCTCGACAAGGGT CGGCTCGAGCCCGTCAGCGTCGTCGATCTTGCCCGCCACCACGCCCTCGACGTGTGGATCGGCGCCTTCGTGCCGCTGGC GAGCTTTGCCCTGTTCCACCTCGTCACGATCTTCCCGATCGCGTGGCTCGCCCTGTCGAGCGAACGCTCCGCTGGCGACT TCCTGATGGTGCAGTTCTCCGGCGCCATGGTTTGCGCCGGCGCGATCGCCGCCTCGGGCCTGATCGCCGACCAGATCGGG CGGCGCAACGTGCTGCTGATCAGCGCCGGGCTGATCGCCGTGTTCGCCTGCGGCAGCATCCTGGCGCCGCTGATCTTCGG CGAGAACGCCATCGGCCAGACGATCTACGTCAATATCGGCTTCATGCTGCTCGGCCTGTCCTACGGCCAGACCGCCGGTG CCGTGACCTCGCGGCTGGGCGGGCGCTACCGCTACACCGGCGCGGCGCTCACCTCCGACCTCGCTTGGTTGTTCGGCGCG GGCTTCGCCCCCCTCGTGGTGCTGTACCTCTCCACCGAGTACGGGCTCGCGATGGTCGGCGTGTACCTGCTGTCGGGCGC GCTGGCGACGCTGCTCGCGCTCTCCCTCGACCGGTCCGAGATGCGCCAGATGTGA
Upstream 100 bases:
>100_bases CAAAACCCCTTTGCGGATGTCAAGCCATCCGCTAGGCACGTCCCGAACGCCGCGCCAAGGCGGCGGCTCCGATCACCTTC AGGCGAGCCGGCTGCCCGCG
Downstream 100 bases:
>100_bases GTTTGGCCCCGCGGGCGGAGACTCATCTCGCCGCGGGACCGGGAGCGCTTTCCGCCGAACCCTGGATGTCGGTTCGGCGC CAGAAAGCGCGTCACAACAA
Product: ABC transporter transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MTTDHATANSHPLERDAQVAMSHHDVSPNDIALGVVIGRASEYFDFFVFGIASVLVFPKVFFPFAAPLTGTLYSFAIFAL AFIARPLGSVFFMWVHKRHGRGVKLTLALFLLGGSTAAISFLPSYNSIGIVAIELLAVLRVAQGFALGGAWDGMASLLAL NAPRERRGWYAMIPQLGAPFGFMVASALFAFFSVNLTPEDFTDWGWRFPFFCAFTINVVALFARLRLVATPEFTRLLDKG RLEPVSVVDLARHHALDVWIGAFVPLASFALFHLVTIFPIAWLALSSERSAGDFLMVQFSGAMVCAGAIAASGLIADQIG RRNVLLISAGLIAVFACGSILAPLIFGENAIGQTIYVNIGFMLLGLSYGQTAGAVTSRLGGRYRYTGAALTSDLAWLFGA GFAPLVVLYLSTEYGLAMVGVYLLSGALATLLALSLDRSEMRQM
Sequences:
>Translated_444_residues MTTDHATANSHPLERDAQVAMSHHDVSPNDIALGVVIGRASEYFDFFVFGIASVLVFPKVFFPFAAPLTGTLYSFAIFAL AFIARPLGSVFFMWVHKRHGRGVKLTLALFLLGGSTAAISFLPSYNSIGIVAIELLAVLRVAQGFALGGAWDGMASLLAL NAPRERRGWYAMIPQLGAPFGFMVASALFAFFSVNLTPEDFTDWGWRFPFFCAFTINVVALFARLRLVATPEFTRLLDKG RLEPVSVVDLARHHALDVWIGAFVPLASFALFHLVTIFPIAWLALSSERSAGDFLMVQFSGAMVCAGAIAASGLIADQIG RRNVLLISAGLIAVFACGSILAPLIFGENAIGQTIYVNIGFMLLGLSYGQTAGAVTSRLGGRYRYTGAALTSDLAWLFGA GFAPLVVLYLSTEYGLAMVGVYLLSGALATLLALSLDRSEMRQM >Mature_443_residues TTDHATANSHPLERDAQVAMSHHDVSPNDIALGVVIGRASEYFDFFVFGIASVLVFPKVFFPFAAPLTGTLYSFAIFALA FIARPLGSVFFMWVHKRHGRGVKLTLALFLLGGSTAAISFLPSYNSIGIVAIELLAVLRVAQGFALGGAWDGMASLLALN APRERRGWYAMIPQLGAPFGFMVASALFAFFSVNLTPEDFTDWGWRFPFFCAFTINVVALFARLRLVATPEFTRLLDKGR LEPVSVVDLARHHALDVWIGAFVPLASFALFHLVTIFPIAWLALSSERSAGDFLMVQFSGAMVCAGAIAASGLIADQIGR RNVLLISAGLIAVFACGSILAPLIFGENAIGQTIYVNIGFMLLGLSYGQTAGAVTSRLGGRYRYTGAALTSDLAWLFGAG FAPLVVLYLSTEYGLAMVGVYLLSGALATLLALSLDRSEMRQM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1789941, Length=421, Percent_Identity=35.8669833729216, Blast_Score=208, Evalue=4e-55, Organism=Escherichia coli, GI1788292, Length=430, Percent_Identity=32.3255813953488, Blast_Score=167, Evalue=1e-42, Organism=Escherichia coli, GI1790550, Length=413, Percent_Identity=28.0871670702179, Blast_Score=142, Evalue=6e-35, Organism=Escherichia coli, GI1788942, Length=315, Percent_Identity=27.6190476190476, Blast_Score=94, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 47752; Mature: 47621
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDHATANSHPLERDAQVAMSHHDVSPNDIALGVVIGRASEYFDFFVFGIASVLVFPKV CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHH FFPFAAPLTGTLYSFAIFALAFIARPLGSVFFMWVHKRHGRGVKLTLALFLLGGSTAAIS HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCEEEE FLPSYNSIGIVAIELLAVLRVAQGFALGGAWDGMASLLALNAPRERRGWYAMIPQLGAPF ECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCEEECHHHCCCH GFMVASALFAFFSVNLTPEDFTDWGWRFPFFCAFTINVVALFARLRLVATPEFTRLLDKG HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC RLEPVSVVDLARHHALDVWIGAFVPLASFALFHLVTIFPIAWLALSSERSAGDFLMVQFS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC GAMVCAGAIAASGLIADQIGRRNVLLISAGLIAVFACGSILAPLIFGENAIGQTIYVNIG CCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEH FMLLGLSYGQTAGAVTSRLGGRYRYTGAALTSDLAWLFGAGFAPLVVLYLSTEYGLAMVG HHHHCCCCCCHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHH VYLLSGALATLLALSLDRSEMRQM HHHHHHHHHHHHHHHCCHHHHHCC >Mature Secondary Structure TTDHATANSHPLERDAQVAMSHHDVSPNDIALGVVIGRASEYFDFFVFGIASVLVFPKV CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHH FFPFAAPLTGTLYSFAIFALAFIARPLGSVFFMWVHKRHGRGVKLTLALFLLGGSTAAIS HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCEEEE FLPSYNSIGIVAIELLAVLRVAQGFALGGAWDGMASLLALNAPRERRGWYAMIPQLGAPF ECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCEEECHHHCCCH GFMVASALFAFFSVNLTPEDFTDWGWRFPFFCAFTINVVALFARLRLVATPEFTRLLDKG HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC RLEPVSVVDLARHHALDVWIGAFVPLASFALFHLVTIFPIAWLALSSERSAGDFLMVQFS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC GAMVCAGAIAASGLIADQIGRRNVLLISAGLIAVFACGSILAPLIFGENAIGQTIYVNIG CCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEH FMLLGLSYGQTAGAVTSRLGGRYRYTGAALTSDLAWLFGAGFAPLVVLYLSTEYGLAMVG HHHHCCCCCCHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHH VYLLSGALATLLALSLDRSEMRQM HHHHHHHHHHHHHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]