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The map label for this gene is ydjX [C]

Identifier: 218532586

GI number: 218532586

Start: 4981672

End: 4982370

Strand: Reverse

Name: ydjX [C]

Synonym: Mchl_4700

Alternate gene names: 218532586

Gene position: 4982370-4981672 (Counterclockwise)

Preceding gene: 218532587

Following gene: 218532585

Centisome position: 86.23

GC content: 69.67

Gene sequence:

>699_bases
ATGGATAAACCCAGCCGCTCGGCCCAGACCTGGGCAGCCACGGCCGGCGCCGCCGCGCTGGCGGTCGGAGCATGGTACCT
CCTGCCCGTCGAGGACTGGCTGCGCGCCTTTTCGGACTGGGCGAACGGCCTCGGTCCCTACGGCCTCCTCGCCTTCGGCG
TGCTGTTCTTCCTGGCGACCCTTCTCATCGTACCGGGTACCCCGCTCACCATCGCTGGGGCCGTCGCCTTCGGCTGGGCG
GTGATGCCGGTGGTGCTGTTCTCGGCGACGCTCGGCTCCTGGCTCGCTTTCGTGGCTGCCCGCCACCTGTTCCGCGAGCG
GGTTCGGGGACTGATCGAGCGCCGGCCGGCGCTGAACGCCACCGTGGAGGCGGTCGGCGACGGCGGCTGGCGGCTCATGA
CCCTGATGCGGCTCAGCCCCTTCGTGCCGTTCAATGCCCAGAACTACGTCTTCGGGGTGACGGATGTCCGCACCTCCGCC
TATCTGATCTCCACGGTGATCGGCATGCTGCCGGGCACGGTGGTGTGCGTCTATCTCGGTGTCATCGGCCGCCATGCCGG
CAGCGACGAGCCGACCCACTGGATCACCCTCGGCCTCGGCCTCCTCGCCACCGTCGCGGCGGTGGAACTCACCCGGCGCC
GGGTGCGGGCCAAGCTTGAAGCCGGCAAACTCAAGCTGGGAAAGGCCGGGGCACGATGA

Upstream 100 bases:

>100_bases
GAACCGCACGATAACGGCCGAGCTTGGCGGAACAGTTACGCCGGCCAACGGTTTGGGGACGCGTGCGACAGGCGCACCGT
TCCCCCTTTCGAGCCACCGA

Downstream 100 bases:

>100_bases
GCGTTCCGCTCGAACAGGGGATGAGCCTGCCGTCGCGGCGCGGCGGCTCGGTGCGCGCATGAGGATGGAACGCGGGGTGG
GTCCAGGATCGTCCGAGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MDKPSRSAQTWAATAGAAALAVGAWYLLPVEDWLRAFSDWANGLGPYGLLAFGVLFFLATLLIVPGTPLTIAGAVAFGWA
VMPVVLFSATLGSWLAFVAARHLFRERVRGLIERRPALNATVEAVGDGGWRLMTLMRLSPFVPFNAQNYVFGVTDVRTSA
YLISTVIGMLPGTVVCVYLGVIGRHAGSDEPTHWITLGLGLLATVAAVELTRRRVRAKLEAGKLKLGKAGAR

Sequences:

>Translated_232_residues
MDKPSRSAQTWAATAGAAALAVGAWYLLPVEDWLRAFSDWANGLGPYGLLAFGVLFFLATLLIVPGTPLTIAGAVAFGWA
VMPVVLFSATLGSWLAFVAARHLFRERVRGLIERRPALNATVEAVGDGGWRLMTLMRLSPFVPFNAQNYVFGVTDVRTSA
YLISTVIGMLPGTVVCVYLGVIGRHAGSDEPTHWITLGLGLLATVAAVELTRRRVRAKLEAGKLKLGKAGAR
>Mature_232_residues
MDKPSRSAQTWAATAGAAALAVGAWYLLPVEDWLRAFSDWANGLGPYGLLAFGVLFFLATLLIVPGTPLTIAGAVAFGWA
VMPVVLFSATLGSWLAFVAARHLFRERVRGLIERRPALNATVEAVGDGGWRLMTLMRLSPFVPFNAQNYVFGVTDVRTSA
YLISTVIGMLPGTVVCVYLGVIGRHAGSDEPTHWITLGLGLLATVAAVELTRRRVRAKLEAGKLKLGKAGAR

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI87081964, Length=189, Percent_Identity=30.1587301587302, Blast_Score=74, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24821; Mature: 24821

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKPSRSAQTWAATAGAAALAVGAWYLLPVEDWLRAFSDWANGLGPYGLLAFGVLFFLAT
CCCCCCCHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LLIVPGTPLTIAGAVAFGWAVMPVVLFSATLGSWLAFVAARHLFRERVRGLIERRPALNA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
TVEAVGDGGWRLMTLMRLSPFVPFNAQNYVFGVTDVRTSAYLISTVIGMLPGTVVCVYLG
HHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHH
VIGRHAGSDEPTHWITLGLGLLATVAAVELTRRRVRAKLEAGKLKLGKAGAR
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCC
>Mature Secondary Structure
MDKPSRSAQTWAATAGAAALAVGAWYLLPVEDWLRAFSDWANGLGPYGLLAFGVLFFLAT
CCCCCCCHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LLIVPGTPLTIAGAVAFGWAVMPVVLFSATLGSWLAFVAARHLFRERVRGLIERRPALNA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
TVEAVGDGGWRLMTLMRLSPFVPFNAQNYVFGVTDVRTSAYLISTVIGMLPGTVVCVYLG
HHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHH
VIGRHAGSDEPTHWITLGLGLLATVAAVELTRRRVRAKLEAGKLKLGKAGAR
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]